RNA–Protein interactions for RNA: ENST00000379446.9

NEDD9-202, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NEDD9, Length 4,536 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-202ENST00000379446 TK2O00142 265 aa6.31□□□□□ -1.4
NEDD9-202ENST00000379446 BTN3A3O00478 584 aa6.31□□□□□ -1.4
NEDD9-202ENST00000379446 GNB5O14775 395 aa6.31□□□□□ -1.4
NEDD9-202ENST00000379446 BIRC5O15392 142 aa6.31□□□□□ -1.4
NEDD9-202ENST00000379446 PCDHGA12O60330 932 aa6.31□□□□□ -1.4
NEDD9-202ENST00000379446 MFN2O95140 757 aa6.31□□□□□ -1.4
NEDD9-202ENST00000379446 IFNA14P01570 189 aa6.31□□□□□ -1.4
NEDD9-202ENST00000379446 HLA-DQB2P05538 268 aa6.31□□□□□ -1.4
NEDD9-202ENST00000379446 CHRNGP07510 517 aa6.31□□□□□ -1.4
NEDD9-202ENST00000379446 DPP4P27487 766 aa6.31□□□□□ -1.4
NEDD9-202ENST00000379446 SLC5A2P31639 672 aa6.31□□□□□ -1.4
NEDD9-202ENST00000379446 S100A3P33764 101 aa6.31□□□□□ -1.4
NEDD9-202ENST00000379446 ACTR3P61158 418 aa6.31□□□□□ -1.4
NEDD9-202ENST00000379446 C2orf80Q0P641 193 aa6.31□□□□□ -1.4
NEDD9-202ENST00000379446 HSPB3Q12988 150 aa6.31□□□□□ -1.4
NEDD9-202ENST00000379446 TEDDM1Q5T9Z0 273 aa6.31□□□□□ -1.4
NEDD9-202ENST00000379446 THOC7Q6I9Y2 204 aaKnown RBP6.31□□□□□ -1.4
NEDD9-202ENST00000379446 ZNF544Q6NX49 715 aa6.31□□□□□ -1.4
NEDD9-202ENST00000379446 IL20RBQ6UXL0 311 aa6.31□□□□□ -1.4
NEDD9-202ENST00000379446 MACC1Q6ZN28 852 aa6.31□□□□□ -1.4
NEDD9-202ENST00000379446 GK5Q6ZS86 529 aa6.31□□□□□ -1.4
NEDD9-202ENST00000379446 NUP54Q7Z3B4 507 aa6.31□□□□□ -1.4
NEDD9-202ENST00000379446 CYP4Z1Q86W10 505 aa6.31□□□□□ -1.4
NEDD9-202ENST00000379446 ZNF567Q8N184 647 aa6.31□□□□□ -1.4
NEDD9-202ENST00000379446 TMIEQ8NEW7 156 aa6.31□□□□□ -1.4
NEDD9-202ENST00000379446 OR6N1Q8NGY5 312 aa6.31□□□□□ -1.4
NEDD9-202ENST00000379446 SPPL2AQ8TCT8 520 aa6.31□□□□□ -1.4
NEDD9-202ENST00000379446 MZB1Q8WU39 189 aa6.31□□□□□ -1.4
NEDD9-202ENST00000379446 SLC39A7Q92504 469 aa6.31□□□□□ -1.4
NEDD9-202ENST00000379446 NTAN1Q96AB6 310 aa6.31□□□□□ -1.4
NEDD9-202ENST00000379446 RMND5BQ96G75 393 aaPredicted RBP6.31□□□□□ -1.4
NEDD9-202ENST00000379446 EPB41L1Q9H4G0 881 aa6.31□□□□□ -1.4
NEDD9-202ENST00000379446 ZNF304Q9HCX3 659 aa6.31□□□□□ -1.4
NEDD9-202ENST00000379446 CHRAC1Q9NRG0 131 aa6.31□□□□□ -1.4
NEDD9-202ENST00000379446 PPP4R1LQ9P1A2 415 aa6.31□□□□□ -1.4
NEDD9-202ENST00000379446 FZD10Q9ULW2 581 aa6.31□□□□□ -1.4
NEDD9-202ENST00000379446 CCDC168Q8NDH2 2452 aa6.31□□□□□ -1.4
NEDD9-202ENST00000379446 FAM159BA6NKW6 160 aa6.3□□□□□ -1.4
NEDD9-202ENST00000379446 C5orf67F2Z3F1 127 aa6.3□□□□□ -1.4
NEDD9-202ENST00000379446 G3V3Y1 287 aa6.3□□□□□ -1.4
NEDD9-202ENST00000379446 FBP2O00757 339 aa6.3□□□□□ -1.4
NEDD9-202ENST00000379446 TOR1BO14657 336 aa6.3□□□□□ -1.4
NEDD9-202ENST00000379446 C2P06681 752 aa6.3□□□□□ -1.4
NEDD9-202ENST00000379446 PABPC4LP0CB38 370 aaKnown RBP6.3□□□□□ -1.4
NEDD9-202ENST00000379446 CEACAM1P13688 526 aa6.3□□□□□ -1.4
NEDD9-202ENST00000379446 HSPA7P48741 367 aa6.3□□□□□ -1.4
NEDD9-202ENST00000379446 NR1H2P55055 460 aa6.3□□□□□ -1.4
NEDD9-202ENST00000379446 LAPTM5Q13571 262 aa6.3□□□□□ -1.4
NEDD9-202ENST00000379446 DNASE1L3Q13609 305 aa6.3□□□□□ -1.4
NEDD9-202ENST00000379446 SLBPQ14493 270 aaKnown RBP eCLIP6.3□□□□□ -1.4
NEDD9-202ENST00000379446 ZNF460Q14592 562 aa6.3□□□□□ -1.4
NEDD9-202ENST00000379446 MPP7Q5T2T1 576 aa6.3□□□□□ -1.4
NEDD9-202ENST00000379446 GUSBP11Q6P575 273 aa6.3□□□□□ -1.4
NEDD9-202ENST00000379446 CISD2Q8N5K1 135 aaKnown RBP6.3□□□□□ -1.4
NEDD9-202ENST00000379446 TRPV3Q8NET8 790 aa6.3□□□□□ -1.4
NEDD9-202ENST00000379446 SNX33Q8WV41 574 aa6.3□□□□□ -1.4
NEDD9-202ENST00000379446 EXTL1Q92935 676 aa6.3□□□□□ -1.4
NEDD9-202ENST00000379446 ZNF707Q96C28 371 aaPredicted RBP6.3□□□□□ -1.4
NEDD9-202ENST00000379446 ARL5BQ96KC2 179 aa6.3□□□□□ -1.4
NEDD9-202ENST00000379446 DHRS4Q9BTZ2 278 aa6.3□□□□□ -1.4
NEDD9-202ENST00000379446 MED18Q9BUE0 208 aa6.3□□□□□ -1.4
NEDD9-202ENST00000379446 WASH6PQ9NQA3 447 aa6.3□□□□□ -1.4
NEDD9-202ENST00000379446 TMEM248Q9NWD8 314 aa6.3□□□□□ -1.4
NEDD9-202ENST00000379446 NDRG3Q9UGV2 375 aa6.3□□□□□ -1.4
NEDD9-202ENST00000379446 RPH3AQ9Y2J0 694 aaPredicted RBP6.3□□□□□ -1.4
NEDD9-202ENST00000379446 VWA7Q9Y334 891 aa6.3□□□□□ -1.4
NEDD9-202ENST00000379446 POLR2AP24928 1970 aaKnown RBP6.3□□□□□ -1.4
NEDD9-202ENST00000379446 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP6.3□□□□□ -1.4
NEDD9-202ENST00000379446 NPEPPSL1A6NEC2 478 aa6.3□□□□□ -1.4
NEDD9-202ENST00000379446 POM121BA6NF01 834 aa6.3□□□□□ -1.4
NEDD9-202ENST00000379446 KLRC4-KLRK1H3BQV0 150 aa6.3□□□□□ -1.4
NEDD9-202ENST00000379446 K7ESM1 405 aa6.3□□□□□ -1.4
NEDD9-202ENST00000379446 HRO43593 1189 aa6.3□□□□□ -1.4
NEDD9-202ENST00000379446 AKAP8O43823 692 aaKnown RBP6.3□□□□□ -1.4
NEDD9-202ENST00000379446 THRAP10827 490 aa6.3□□□□□ -1.4
NEDD9-202ENST00000379446 TCF3P15923 654 aa6.3□□□□□ -1.4
NEDD9-202ENST00000379446 TPSB2P20231 275 aa6.3□□□□□ -1.4
NEDD9-202ENST00000379446 ST13P50502 369 aaKnown RBP6.3□□□□□ -1.4
NEDD9-202ENST00000379446 DIO3P55073 304 aa6.3□□□□□ -1.4
NEDD9-202ENST00000379446 GPLD1P80108 840 aa6.3□□□□□ -1.4
NEDD9-202ENST00000379446 PLP2Q04941 152 aa6.3□□□□□ -1.4
NEDD9-202ENST00000379446 KLF10Q13118 480 aa6.3□□□□□ -1.4
NEDD9-202ENST00000379446 PCBP2Q15366 365 aaKnown RBP eCLIP6.3□□□□□ -1.43e-6■■■■□ 20.8
NEDD9-202ENST00000379446 TPSAB1Q15661 275 aa6.3□□□□□ -1.4
NEDD9-202ENST00000379446 SLC9B1Q4ZJI4 515 aa6.3□□□□□ -1.4
NEDD9-202ENST00000379446 GRTP1Q5TC63 336 aa6.3□□□□□ -1.4
NEDD9-202ENST00000379446 NCBP2-AS2Q69YL0 99 aa6.3□□□□□ -1.4
NEDD9-202ENST00000379446 NOXRED1Q6NXP6 359 aa6.3□□□□□ -1.4
NEDD9-202ENST00000379446 C16orf89Q6UX73 402 aa6.3□□□□□ -1.4
NEDD9-202ENST00000379446 ZBTB49Q6ZSB9 765 aa6.3□□□□□ -1.4
NEDD9-202ENST00000379446 SLC22A9Q8IVM8 553 aa6.3□□□□□ -1.4
NEDD9-202ENST00000379446 KYQ8NBH2 561 aa6.3□□□□□ -1.4
NEDD9-202ENST00000379446 DOK4Q8TEW6 326 aa6.3□□□□□ -1.4
NEDD9-202ENST00000379446 ANKRD49Q8WVL7 239 aa6.3□□□□□ -1.4
NEDD9-202ENST00000379446 CPNE1Q99829 537 aa6.3□□□□□ -1.4
NEDD9-202ENST00000379446 MRM3Q9HC36 420 aaKnown RBP6.3□□□□□ -1.4
NEDD9-202ENST00000379446 ENAMQ9NRM1 1142 aa6.3□□□□□ -1.4
NEDD9-202ENST00000379446 SACM1LQ9NTJ5 587 aa6.3□□□□□ -1.4
NEDD9-202ENST00000379446 RBM7Q9Y580 266 aaKnown RBP6.3□□□□□ -1.4
NEDD9-202ENST00000379446 OR51F1A6NGY5 319 aa6.3□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms