RNA–Protein interactions for RNA: ENST00000378161.5

NPHP4-202, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 4,370 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-202ENST00000378161 POP7O75817 140 aaKnown RBP11.39□□□□□ -0.59
NPHP4-202ENST00000378161 POP4O95707 220 aaKnown RBP11.39□□□□□ -0.59
NPHP4-202ENST00000378161 TUBB3Q13509 450 aa11.39□□□□□ -0.59
NPHP4-202ENST00000378161 CDH18Q13634 790 aa11.39□□□□□ -0.59
NPHP4-202ENST00000378161 GRM3Q14832 879 aa11.39□□□□□ -0.59
NPHP4-202ENST00000378161 ETFDHQ16134 617 aa11.39□□□□□ -0.59
NPHP4-202ENST00000378161 VMACQ2NL98 169 aa11.39□□□□□ -0.59
NPHP4-202ENST00000378161 COMTD1Q86VU5 262 aa11.39□□□□□ -0.59
NPHP4-202ENST00000378161 CEP97Q8IW35 865 aa11.39□□□□□ -0.59
NPHP4-202ENST00000378161 C10orf53Q8N6V4 93 aa11.39□□□□□ -0.59
NPHP4-202ENST00000378161 POM121Q96HA1 1249 aa11.39□□□□□ -0.59
NPHP4-202ENST00000378161 CMSS1Q9BQ75 279 aaKnown RBP11.39□□□□□ -0.59
NPHP4-202ENST00000378161 ABCG5Q9H222 651 aa11.39□□□□□ -0.59
NPHP4-202ENST00000378161 TINAGQ9UJW2 476 aa11.39□□□□□ -0.59
NPHP4-202ENST00000378161 ELF5Q9UKW6 265 aaPredicted RBP11.39□□□□□ -0.59
NPHP4-202ENST00000378161 INVSQ9Y283 1065 aa11.39□□□□□ -0.59
NPHP4-202ENST00000378161 LRP6O75581 1613 aa11.39□□□□□ -0.59
NPHP4-202ENST00000378161 GNG14A0A1W2PPG7 69 aa11.39□□□□□ -0.59
NPHP4-202ENST00000378161 H3BRB1 525 aa11.39□□□□□ -0.59
NPHP4-202ENST00000378161 TMEM127O75204 238 aa11.39□□□□□ -0.59
NPHP4-202ENST00000378161 VNN1O95497 513 aa11.39□□□□□ -0.59
NPHP4-202ENST00000378161 AGR2O95994 175 aa11.39□□□□□ -0.59
NPHP4-202ENST00000378161 HSD17B1P14061 328 aa11.39□□□□□ -0.59
NPHP4-202ENST00000378161 GGT5P36269 586 aa11.39□□□□□ -0.59
NPHP4-202ENST00000378161 SMSP52788 366 aa11.39□□□□□ -0.59
NPHP4-202ENST00000378161 KLF1Q13351 362 aaPredicted RBP11.39□□□□□ -0.59
NPHP4-202ENST00000378161 TSTA3Q13630 321 aaPredicted RBP11.39□□□□□ -0.59
NPHP4-202ENST00000378161 DOC2AQ14183 400 aa11.39□□□□□ -0.59
NPHP4-202ENST00000378161 SF3A2Q15428 464 aaKnown RBP11.39□□□□□ -0.59
NPHP4-202ENST00000378161 KLHL22Q53GT1 634 aa11.39□□□□□ -0.59
NPHP4-202ENST00000378161 SMIM15Q7Z3B0 74 aa11.39□□□□□ -0.59
NPHP4-202ENST00000378161 KANSL1Q7Z3B3 1105 aa11.39□□□□□ -0.59
NPHP4-202ENST00000378161 RNF180Q86T96 592 aa11.39□□□□□ -0.59
NPHP4-202ENST00000378161 IGDCC3Q8IVU1 814 aa11.39□□□□□ -0.59
NPHP4-202ENST00000378161 MS4A15Q8N5U1 240 aa11.39□□□□□ -0.59
NPHP4-202ENST00000378161 OR9I1Q8NGQ6 314 aa11.39□□□□□ -0.59
NPHP4-202ENST00000378161 SORT1Q99523 831 aa11.39□□□□□ -0.59
NPHP4-202ENST00000378161 TMEM175Q9BSA9 504 aa11.39□□□□□ -0.59
NPHP4-202ENST00000378161 RBM22Q9NW64 420 aaKnown RBP eCLIP11.39□□□□□ -0.59
NPHP4-202ENST00000378161 TMEM161AQ9NX61 479 aa11.39□□□□□ -0.59
NPHP4-202ENST00000378161 SYNDIG1LA6NDD5 238 aa11.39□□□□□ -0.59
NPHP4-202ENST00000378161 ANKDD1BA6NHY2 528 aa11.39□□□□□ -0.59
NPHP4-202ENST00000378161 NPIPA7E9PJI5 369 aa11.39□□□□□ -0.59
NPHP4-202ENST00000378161 RFXAPO00287 272 aa11.39□□□□□ -0.59
NPHP4-202ENST00000378161 FADS1O60427 444 aa11.39□□□□□ -0.59
NPHP4-202ENST00000378161 CDK14O94921 469 aa11.39□□□□□ -0.59
NPHP4-202ENST00000378161 IFNA17P01571 189 aa11.39□□□□□ -0.59
NPHP4-202ENST00000378161 NPIPA8P0DM63 369 aa11.39□□□□□ -0.59
NPHP4-202ENST00000378161 ODC1P11926 461 aa11.39□□□□□ -0.59
NPHP4-202ENST00000378161 CERS1P27544 350 aa11.39□□□□□ -0.59
NPHP4-202ENST00000378161 GNG10P50151 68 aa11.39□□□□□ -0.59
NPHP4-202ENST00000378161 FOXM1Q08050 763 aa11.39□□□□□ -0.59
NPHP4-202ENST00000378161 HNRNPA0Q13151 305 aaKnown RBP11.39□□□□□ -0.59
NPHP4-202ENST00000378161 HKDC1Q2TB90 917 aa11.39□□□□□ -0.59
NPHP4-202ENST00000378161 EEF1DP3Q658K8 133 aa11.39□□□□□ -0.59
NPHP4-202ENST00000378161 GPR142Q7Z601 462 aa11.39□□□□□ -0.59
NPHP4-202ENST00000378161 CUZD1Q86UP6 607 aa11.39□□□□□ -0.59
NPHP4-202ENST00000378161 DENND1CQ8IV53 801 aa11.39□□□□□ -0.59
NPHP4-202ENST00000378161 OR52H1Q8NGJ2 320 aa11.39□□□□□ -0.59
NPHP4-202ENST00000378161 ACOT11Q8WXI4 607 aaPredicted RBP11.39□□□□□ -0.59
NPHP4-202ENST00000378161 KCNJ9Q92806 393 aa11.39□□□□□ -0.59
NPHP4-202ENST00000378161 CLP1Q92989 425 aaKnown RBP11.39□□□□□ -0.59
NPHP4-202ENST00000378161 WNT8BQ93098 351 aa11.39□□□□□ -0.59
NPHP4-202ENST00000378161 P2RY13Q9BPV8 354 aa11.39□□□□□ -0.59
NPHP4-202ENST00000378161 SDCBP2Q9H190 292 aa11.39□□□□□ -0.59
NPHP4-202ENST00000378161 NMUR1Q9HB89 426 aa11.39□□□□□ -0.59
NPHP4-202ENST00000378161 PTPRHQ9HD43 1115 aa11.39□□□□□ -0.59
NPHP4-202ENST00000378161 OXSMQ9NWU1 459 aa11.39□□□□□ -0.59
NPHP4-202ENST00000378161 RPS6KA6Q9UK32 745 aa11.39□□□□□ -0.59
NPHP4-202ENST00000378161 ZNF490Q9ULM2 529 aaPredicted RBP11.39□□□□□ -0.59
NPHP4-202ENST00000378161 WASF3Q9UPY6 502 aa11.39□□□□□ -0.59
NPHP4-202ENST00000378161 LOC102723532A0A0G2JNH3 316 aa11.38□□□□□ -0.59
NPHP4-202ENST00000378161 KANTRA0A1W2PQU2 76 aa11.38□□□□□ -0.59
NPHP4-202ENST00000378161 CDC40O60508 579 aaKnown RBP eCLIP11.38□□□□□ -0.59
NPHP4-202ENST00000378161 ZNF8P17098 575 aaPredicted RBP11.38□□□□□ -0.59
NPHP4-202ENST00000378161 GDF10P55107 478 aa11.38□□□□□ -0.59
NPHP4-202ENST00000378161 Q5BKY6 102 aa11.38□□□□□ -0.59
NPHP4-202ENST00000378161 VASNQ6EMK4 673 aa11.38□□□□□ -0.59
NPHP4-202ENST00000378161 SLC27A1Q6PCB7 646 aa11.38□□□□□ -0.59
NPHP4-202ENST00000378161 MAMDC2Q7Z304 686 aaPredicted RBP11.38□□□□□ -0.59
NPHP4-202ENST00000378161 OR7G2Q8NG99 324 aa11.38□□□□□ -0.59
NPHP4-202ENST00000378161 CLEC4DQ8WXI8 215 aa11.38□□□□□ -0.59
NPHP4-202ENST00000378161 MYO19Q96H55 970 aa11.38□□□□□ -0.59
NPHP4-202ENST00000378161 SFXN2Q96NB2 322 aa11.38□□□□□ -0.59
NPHP4-202ENST00000378161 OR2A14Q96R47 310 aa11.38□□□□□ -0.59
NPHP4-202ENST00000378161 MARK1Q9P0L2 795 aa11.38□□□□□ -0.59
NPHP4-202ENST00000378161 SPASTQ9UBP0 616 aa11.38□□□□□ -0.59
NPHP4-202ENST00000378161 SRRDQ9UH36 339 aa11.38□□□□□ -0.59
NPHP4-202ENST00000378161 TBC1D24Q9ULP9 559 aa11.38□□□□□ -0.59
NPHP4-202ENST00000378161 LCHNA4D1U4 455 aa11.38□□□□□ -0.59
NPHP4-202ENST00000378161 PRSS47A8MTI9 375 aa11.38□□□□□ -0.59
NPHP4-202ENST00000378161 C5orf58C9J3I9 102 aa11.38□□□□□ -0.59
NPHP4-202ENST00000378161 ALDOBP05062 364 aa11.38□□□□□ -0.59
NPHP4-202ENST00000378161 OXTRP30559 389 aa11.38□□□□□ -0.59
NPHP4-202ENST00000378161 PPP3R1P63098 170 aa11.38□□□□□ -0.59
NPHP4-202ENST00000378161 FAM189A2Q15884 450 aa11.38□□□□□ -0.59
NPHP4-202ENST00000378161 TMEM44Q2T9K0 475 aa11.38□□□□□ -0.59
NPHP4-202ENST00000378161 IRAK1BP1Q5VVH5 260 aa11.38□□□□□ -0.59
NPHP4-202ENST00000378161 LCLAT1Q6UWP7 414 aa11.38□□□□□ -0.59
NPHP4-202ENST00000378161 DNAJB7Q7Z6W7 309 aaPredicted RBP11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms