RNA–Protein interactions for RNA: ENST00000378156.8

NPHP4-201, Transcript of nephrocystin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPHP4, Length 4,994 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-201ENST00000378156 PCDHGA3Q9Y5H0 932 aa14.53□□□□□ -0.08
NPHP4-201ENST00000378156 TSPAN6O43657 245 aa14.52□□□□□ -0.08
NPHP4-201ENST00000378156 GSTT2BP0CG30 244 aa14.52□□□□□ -0.08
NPHP4-201ENST00000378156 CD36P16671 472 aa14.52□□□□□ -0.08
NPHP4-201ENST00000378156 ITGA3P26006 1051 aa14.52□□□□□ -0.08
NPHP4-201ENST00000378156 DNAJA1P31689 397 aaKnown RBP14.52□□□□□ -0.08
NPHP4-201ENST00000378156 TAS2R50P59544 299 aa14.52□□□□□ -0.08
NPHP4-201ENST00000378156 EIF5AP63241 154 aaKnown RBP14.52□□□□□ -0.08
NPHP4-201ENST00000378156 TUBA1BP68363 451 aa14.52□□□□□ -0.08
NPHP4-201ENST00000378156 KLHL22Q53GT1 634 aa14.52□□□□□ -0.08
NPHP4-201ENST00000378156 TUBA1AQ71U36 451 aa14.52□□□□□ -0.08
NPHP4-201ENST00000378156 APCDD1Q8J025 514 aa14.52□□□□□ -0.08
NPHP4-201ENST00000378156 TRAM1L1Q8N609 369 aa14.52□□□□□ -0.08
NPHP4-201ENST00000378156 SLC45A3Q96JT2 553 aa14.52□□□□□ -0.08
NPHP4-201ENST00000378156 CAMK1GQ96NX5 476 aa14.52□□□□□ -0.08
NPHP4-201ENST00000378156 C12orf4Q9NQ89 552 aa14.52□□□□□ -0.08
NPHP4-201ENST00000378156 AIG1Q9NVV5 245 aa14.52□□□□□ -0.08
NPHP4-201ENST00000378156 ACSL5Q9ULC5 683 aa14.52□□□□□ -0.08
NPHP4-201ENST00000378156 CDC14AQ9UNH5 594 aa14.52□□□□□ -0.08
NPHP4-201ENST00000378156 PHF24Q9UPV7 400 aa14.52□□□□□ -0.08
NPHP4-201ENST00000378156 A0A0G2JPF8 293 aa14.52□□□□□ -0.08
NPHP4-201ENST00000378156 HNRNPCL3B7ZW38 293 aa14.52□□□□□ -0.08
NPHP4-201ENST00000378156 HNRNPCL4P0DMR1 293 aa14.52□□□□□ -0.08
NPHP4-201ENST00000378156 RAB8AP61006 207 aa14.52□□□□□ -0.08
NPHP4-201ENST00000378156 ABHD18Q0P651 414 aa14.52□□□□□ -0.08
NPHP4-201ENST00000378156 TARDBPQ13148 414 aaKnown RBP eCLIP14.52□□□□□ -0.082e-6■■■■■ 28.6
NPHP4-201ENST00000378156 EIPR1Q53HC9 387 aa14.52□□□□□ -0.08
NPHP4-201ENST00000378156 NIPAL1Q6NVV3 410 aa14.52□□□□□ -0.08
NPHP4-201ENST00000378156 OR10G2Q8NGC3 310 aa14.52□□□□□ -0.08
NPHP4-201ENST00000378156 KCNC2Q96PR1 638 aa14.52□□□□□ -0.08
NPHP4-201ENST00000378156 TPT1P8Q9HAU6 139 aa14.52□□□□□ -0.08
NPHP4-201ENST00000378156 A6NHS1 94 aa14.52□□□□□ -0.09
NPHP4-201ENST00000378156 CHP2O43745 196 aa14.52□□□□□ -0.09
NPHP4-201ENST00000378156 CBX5P45973 191 aa14.52□□□□□ -0.09
NPHP4-201ENST00000378156 DSC3Q14574 896 aa14.52□□□□□ -0.09
NPHP4-201ENST00000378156 CMPK2Q5EBM0 449 aa14.52□□□□□ -0.09
NPHP4-201ENST00000378156 ADNP2Q6IQ32 1131 aa14.52□□□□□ -0.09
NPHP4-201ENST00000378156 TSPEARQ8WU66 669 aa14.52□□□□□ -0.09
NPHP4-201ENST00000378156 SORCS1Q8WY21 1168 aa14.52□□□□□ -0.09
NPHP4-201ENST00000378156 ELL3Q9HB65 397 aaPredicted RBP14.52□□□□□ -0.09
NPHP4-201ENST00000378156 P2RX2Q9UBL9 471 aa14.52□□□□□ -0.09
NPHP4-201ENST00000378156 MKLN1Q9UL63 735 aa14.52□□□□□ -0.09
NPHP4-201ENST00000378156 JUNP05412 331 aaKnown RBP14.52□□□□□ -0.09
NPHP4-201ENST00000378156 CHRM1P11229 460 aaPredicted RBP14.52□□□□□ -0.09
NPHP4-201ENST00000378156 ACRV1P26436 265 aa14.52□□□□□ -0.09
NPHP4-201ENST00000378156 LBX1P52954 281 aa14.52□□□□□ -0.09
NPHP4-201ENST00000378156 BTN3A2P78410 334 aa14.52□□□□□ -0.09
NPHP4-201ENST00000378156 TICAM1Q8IUC6 712 aa14.52□□□□□ -0.09
NPHP4-201ENST00000378156 SPAG16Q8N0X2 631 aa14.52□□□□□ -0.09
NPHP4-201ENST00000378156 PYURFQ96I23 114 aa14.52□□□□□ -0.09
NPHP4-201ENST00000378156 ART5Q96L15 291 aa14.52□□□□□ -0.09
NPHP4-201ENST00000378156 DMRTB1Q96MA1 342 aa14.52□□□□□ -0.09
NPHP4-201ENST00000378156 CCDC115Q96NT0 180 aa14.52□□□□□ -0.09
NPHP4-201ENST00000378156 CDADC1Q9BWV3 514 aa14.52□□□□□ -0.09
NPHP4-201ENST00000378156 ACTL7AQ9Y615 435 aa14.52□□□□□ -0.09
NPHP4-201ENST00000378156 COL22A1Q8NFW1 1626 aaPredicted RBP14.51□□□□□ -0.09
NPHP4-201ENST00000378156 TMEM189-UBE2V1I3L0A0 370 aa14.51□□□□□ -0.09
NPHP4-201ENST00000378156 MAGEB3O15480 346 aa14.51□□□□□ -0.09
NPHP4-201ENST00000378156 KAT7O95251 611 aa14.51□□□□□ -0.09
NPHP4-201ENST00000378156 TIMP1P01033 207 aa14.51□□□□□ -0.09
NPHP4-201ENST00000378156 APOC1P02654 83 aa14.51□□□□□ -0.09
NPHP4-201ENST00000378156 CFIP05156 583 aa14.51□□□□□ -0.09
NPHP4-201ENST00000378156 ELK4P28324 431 aa14.51□□□□□ -0.09
NPHP4-201ENST00000378156 IL12BP29460 328 aa14.51□□□□□ -0.09
NPHP4-201ENST00000378156 HTRA3P83110 453 aa14.51□□□□□ -0.09
NPHP4-201ENST00000378156 MXD1Q05195 221 aa14.51□□□□□ -0.09
NPHP4-201ENST00000378156 FBXO43Q4G163 708 aa14.51□□□□□ -0.09
NPHP4-201ENST00000378156 BLOC1S3Q6QNY0 202 aa14.51□□□□□ -0.09
NPHP4-201ENST00000378156 TMEM25Q86YD3 366 aa14.51□□□□□ -0.09
NPHP4-201ENST00000378156 OR8H3Q8N146 312 aa14.51□□□□□ -0.09
NPHP4-201ENST00000378156 ATP6V1C2Q8NEY4 427 aa14.51□□□□□ -0.09
NPHP4-201ENST00000378156 FIBINQ8TAL6 211 aa14.51□□□□□ -0.09
NPHP4-201ENST00000378156 PREBQ9HCU5 417 aa14.51□□□□□ -0.09
NPHP4-201ENST00000378156 UTS2RQ9UKP6 389 aa14.51□□□□□ -0.09
NPHP4-201ENST00000378156 LDB2O43679 373 aa14.51□□□□□ -0.09
NPHP4-201ENST00000378156 GBAP04062 536 aa14.51□□□□□ -0.09
NPHP4-201ENST00000378156 DHPSP49366 369 aaPredicted RBP14.51□□□□□ -0.09
NPHP4-201ENST00000378156 CDK6Q00534 326 aa14.51□□□□□ -0.09
NPHP4-201ENST00000378156 CXorf57Q6NSI4 855 aaKnown RBP14.51□□□□□ -0.09
NPHP4-201ENST00000378156 CLIP4Q8N3C7 705 aa14.51□□□□□ -0.09
NPHP4-201ENST00000378156 KRTCAP2Q8N6L1 136 aa14.51□□□□□ -0.09
NPHP4-201ENST00000378156 ZNF433Q8N7K0 673 aaPredicted RBP14.51□□□□□ -0.09
NPHP4-201ENST00000378156 UFD1Q92890 307 aa14.51□□□□□ -0.09
NPHP4-201ENST00000378156 CRELD1Q96HD1 420 aa14.51□□□□□ -0.09
NPHP4-201ENST00000378156 TRIM2Q9C040 744 aa14.51□□□□□ -0.09
NPHP4-201ENST00000378156 STOX2Q9P2F5 926 aaPredicted RBP14.51□□□□□ -0.09
NPHP4-201ENST00000378156 PRODHO43272 600 aa14.51□□□□□ -0.09
NPHP4-201ENST00000378156 DENRO43583 198 aaKnown RBP14.51□□□□□ -0.09
NPHP4-201ENST00000378156 NPPAP01160 153 aa14.51□□□□□ -0.09
NPHP4-201ENST00000378156 MAZP56270 477 aaKnown RBP14.51□□□□□ -0.09
NPHP4-201ENST00000378156 NCEH1Q6PIU2 408 aa14.51□□□□□ -0.09
NPHP4-201ENST00000378156 MINDY1Q8N5J2 469 aa14.51□□□□□ -0.09
NPHP4-201ENST00000378156 OR4C6Q8NH72 309 aa14.51□□□□□ -0.09
NPHP4-201ENST00000378156 PTERQ96BW5 349 aa14.51□□□□□ -0.09
NPHP4-201ENST00000378156 RPL36Q9Y3U8 105 aaKnown RBP14.51□□□□□ -0.09
NPHP4-201ENST00000378156 PCDHGA7Q9Y5G6 932 aa14.51□□□□□ -0.09
NPHP4-201ENST00000378156 TTC34A8MYJ7 566 aa14.51□□□□□ -0.09
NPHP4-201ENST00000378156 SOCS2O14508 198 aa14.51□□□□□ -0.09
NPHP4-201ENST00000378156 STATHP02808 62 aa14.51□□□□□ -0.09
NPHP4-201ENST00000378156 VIPR2P41587 438 aa14.51□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms