RNA–Protein interactions for RNA: ENST00000377017.5

TIMP1-202, Transcript of TIMP metallopeptidase inhibitor 1, humanhuman

TSL 2 BASIC

Gene TIMP1, Length 626 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP1-202ENST00000377017 TNFRSF12AQ9NP84 129 aa12.54□□□□□ -0.4
TIMP1-202ENST00000377017 STARD5Q9NSY2 213 aa12.54□□□□□ -0.4
TIMP1-202ENST00000377017 RIC8BQ9NVN3 520 aa12.54□□□□□ -0.4
TIMP1-202ENST00000377017 FAM53CQ9NYF3 392 aa12.54□□□□□ -0.4
TIMP1-202ENST00000377017 VTI1BQ9UEU0 232 aa12.54□□□□□ -0.4
TIMP1-202ENST00000377017 CDC14AQ9UNH5 594 aa12.54□□□□□ -0.4
TIMP1-202ENST00000377017 SLC12A4Q9UP95 1085 aa12.54□□□□□ -0.4
TIMP1-202ENST00000377017 NEUROG3Q9Y4Z2 214 aa12.54□□□□□ -0.4
TIMP1-202ENST00000377017 PCDHGA7Q9Y5G6 932 aa12.54□□□□□ -0.4
TIMP1-202ENST00000377017 DNAJC15Q9Y5T4 150 aa12.54□□□□□ -0.4
TIMP1-202ENST00000377017 B3GALT1Q9Y5Z6 326 aa12.54□□□□□ -0.4
TIMP1-202ENST00000377017 SLC22A7Q9Y694 548 aa12.54□□□□□ -0.4
TIMP1-202ENST00000377017 CFAP54Q96N23 3096 aa12.54□□□□□ -0.4
TIMP1-202ENST00000377017 A0A1W2PNU3 283 aaPredicted RBP12.53□□□□□ -0.4
TIMP1-202ENST00000377017 TRPC5OSA6NMA1 111 aa12.53□□□□□ -0.4
TIMP1-202ENST00000377017 TMEM233B4DJY2 109 aa12.53□□□□□ -0.4
TIMP1-202ENST00000377017 TCP11X1B4DZS4 312 aa12.53□□□□□ -0.4
TIMP1-202ENST00000377017 DSCR3O14972 297 aa12.53□□□□□ -0.4
TIMP1-202ENST00000377017 NVLO15381 856 aaKnown RBP12.53□□□□□ -0.4
TIMP1-202ENST00000377017 ERI3O43414 337 aaKnown RBP12.53□□□□□ -0.4
TIMP1-202ENST00000377017 SKAP2O75563 359 aaPredicted RBP12.53□□□□□ -0.4
TIMP1-202ENST00000377017 KIAA0754O94854 1291 aa12.53□□□□□ -0.4
TIMP1-202ENST00000377017 ALOX12P18054 663 aa12.53□□□□□ -0.4
TIMP1-202ENST00000377017 TSFMP43897 325 aaKnown RBP12.53□□□□□ -0.4
TIMP1-202ENST00000377017 AVPR1BP47901 424 aa12.53□□□□□ -0.4
TIMP1-202ENST00000377017 HTR6P50406 440 aa12.53□□□□□ -0.4
TIMP1-202ENST00000377017 HYAL2Q12891 473 aa12.53□□□□□ -0.4
TIMP1-202ENST00000377017 RTP5Q14D33 572 aa12.53□□□□□ -0.4
TIMP1-202ENST00000377017 ABRAXAS2Q15018 415 aa12.53□□□□□ -0.4
TIMP1-202ENST00000377017 PDCD2Q16342 344 aaPredicted RBP12.53□□□□□ -0.4
TIMP1-202ENST00000377017 ADPRMQ3LIE5 342 aa12.53□□□□□ -0.4
TIMP1-202ENST00000377017 TUBB8Q3ZCM7 444 aa12.53□□□□□ -0.4
TIMP1-202ENST00000377017 DEPDC1Q5TB30 811 aa12.53□□□□□ -0.4
TIMP1-202ENST00000377017 PRMT9Q6P2P2 845 aa12.53□□□□□ -0.4
TIMP1-202ENST00000377017 ATG14Q6ZNE5 492 aa12.53□□□□□ -0.4
TIMP1-202ENST00000377017 FAM47EQ6ZV65 393 aa12.53□□□□□ -0.4
TIMP1-202ENST00000377017 TTLL10Q6ZVT0 673 aa12.53□□□□□ -0.4
TIMP1-202ENST00000377017 TRIM46Q7Z4K8 759 aa12.53□□□□□ -0.4
TIMP1-202ENST00000377017 MARCH9Q86YJ5 346 aa12.53□□□□□ -0.4
TIMP1-202ENST00000377017 RGMAQ96B86 450 aa12.53□□□□□ -0.4
TIMP1-202ENST00000377017 MS4A6EQ96DS6 147 aa12.53□□□□□ -0.4
TIMP1-202ENST00000377017 SLC46A1Q96NT5 459 aa12.53□□□□□ -0.4
TIMP1-202ENST00000377017 MACROD1Q9BQ69 325 aa12.53□□□□□ -0.4
TIMP1-202ENST00000377017 SCNM1Q9BWG6 230 aa12.53□□□□□ -0.4
TIMP1-202ENST00000377017 OR51B5Q9H339 312 aa12.53□□□□□ -0.4
TIMP1-202ENST00000377017 COPS7BQ9H9Q2 264 aaPredicted RBP12.53□□□□□ -0.4
TIMP1-202ENST00000377017 THSD1Q9NS62 852 aa12.53□□□□□ -0.4
TIMP1-202ENST00000377017 FARSBQ9NSD9 589 aaKnown RBP12.53□□□□□ -0.4
TIMP1-202ENST00000377017 PNPOQ9NVS9 261 aa12.53□□□□□ -0.4
TIMP1-202ENST00000377017 VPS29Q9UBQ0 182 aa12.53□□□□□ -0.4
TIMP1-202ENST00000377017 MARCOQ9UEW3 520 aaPredicted RBP12.53□□□□□ -0.4
TIMP1-202ENST00000377017 NDOR1Q9UHB4 597 aa12.53□□□□□ -0.4
TIMP1-202ENST00000377017 KLK13Q9UKR3 277 aa12.53□□□□□ -0.4
TIMP1-202ENST00000377017 AK5Q9Y6K8 562 aa12.53□□□□□ -0.4
TIMP1-202ENST00000377017 A0A1B0GX78 115 aa12.52□□□□□ -0.41
TIMP1-202ENST00000377017 PMS2P1A4D2B8 440 aa12.52□□□□□ -0.41
TIMP1-202ENST00000377017 C9orf172C9J069 976 aa12.52□□□□□ -0.41
TIMP1-202ENST00000377017 PIP5K1BO14986 540 aa12.52□□□□□ -0.41
TIMP1-202ENST00000377017 POLR3GO15318 223 aaPredicted RBP12.52□□□□□ -0.41
TIMP1-202ENST00000377017 HDAC3O15379 428 aa12.52□□□□□ -0.41
TIMP1-202ENST00000377017 RSL1D1O76021 490 aaKnown RBP12.52□□□□□ -0.41
TIMP1-202ENST00000377017 DXOO77932 396 aaKnown RBP12.52□□□□□ -0.41
TIMP1-202ENST00000377017 STK17BO94768 372 aa12.52□□□□□ -0.41
TIMP1-202ENST00000377017 KLK3P07288 261 aaPredicted RBP12.52□□□□□ -0.41
TIMP1-202ENST00000377017 CTSBP07858 339 aa12.52□□□□□ -0.41
TIMP1-202ENST00000377017 ADRB1P08588 477 aa12.52□□□□□ -0.41
TIMP1-202ENST00000377017 VIMP08670 466 aaKnown RBP12.52□□□□□ -0.41
TIMP1-202ENST00000377017 ZNF888P0CJ79 500 aaPredicted RBP12.52□□□□□ -0.41
TIMP1-202ENST00000377017 KITP10721 976 aa12.52□□□□□ -0.41
TIMP1-202ENST00000377017 PIM1P11309 404 aaPredicted RBP12.52□□□□□ -0.41
TIMP1-202ENST00000377017 AGXTP21549 392 aa12.52□□□□□ -0.41
TIMP1-202ENST00000377017 ALAS2P22557 587 aa12.52□□□□□ -0.41
TIMP1-202ENST00000377017 HNRNPH1P31943 449 aaKnown RBP12.52□□□□□ -0.41
TIMP1-202ENST00000377017 PLA2G16P53816 162 aa12.52□□□□□ -0.41
TIMP1-202ENST00000377017 CAMK2BQ13554 666 aa12.52□□□□□ -0.41
TIMP1-202ENST00000377017 AP5B1Q2VPB7 878 aa12.52□□□□□ -0.41
TIMP1-202ENST00000377017 UGT3A2Q3SY77 523 aa12.52□□□□□ -0.41
TIMP1-202ENST00000377017 SPIN4Q56A73 249 aa12.52□□□□□ -0.41
TIMP1-202ENST00000377017 PAGE2Q7Z2X7 111 aa12.52□□□□□ -0.41
TIMP1-202ENST00000377017 RNF175Q8N4F7 328 aa12.52□□□□□ -0.41
TIMP1-202ENST00000377017 UTP15Q8TED0 518 aaKnown RBP12.52□□□□□ -0.41
TIMP1-202ENST00000377017 C19orf60Q96EN9 201 aa12.52□□□□□ -0.41
TIMP1-202ENST00000377017 METTL2AQ96IZ6 378 aaKnown RBP12.52□□□□□ -0.41
TIMP1-202ENST00000377017 C10orf90Q96M02 699 aa12.52□□□□□ -0.41
TIMP1-202ENST00000377017 LRFN5Q96NI6 719 aa12.52□□□□□ -0.41
TIMP1-202ENST00000377017 QRFPRQ96P65 431 aa12.52□□□□□ -0.41
TIMP1-202ENST00000377017 F2RL3Q96RI0 385 aa12.52□□□□□ -0.41
TIMP1-202ENST00000377017 HBEGFQ99075 208 aa12.52□□□□□ -0.41
TIMP1-202ENST00000377017 DPH2Q9BQC3 489 aaPredicted RBP12.52□□□□□ -0.41
TIMP1-202ENST00000377017 TBCDQ9BTW9 1192 aa12.52□□□□□ -0.41
TIMP1-202ENST00000377017 ACPTQ9BZG2 426 aa12.52□□□□□ -0.41
TIMP1-202ENST00000377017 SLCO1B3Q9NPD5 702 aa12.52□□□□□ -0.41
TIMP1-202ENST00000377017 MSRB2Q9Y3D2 182 aa12.52□□□□□ -0.41
TIMP1-202ENST00000377017 SPTBP11277 2137 aa12.52□□□□□ -0.41
TIMP1-202ENST00000377017 SPTBN4Q9H254 2564 aa12.51□□□□□ -0.41
TIMP1-202ENST00000377017 ARHGAP10A1A4S6 786 aa12.51□□□□□ -0.41
TIMP1-202ENST00000377017 TRABD2BA6NFA1 517 aa12.51□□□□□ -0.41
TIMP1-202ENST00000377017 H0YIG0 161 aa12.51□□□□□ -0.41
TIMP1-202ENST00000377017 STMND1H3BQB6 276 aa12.51□□□□□ -0.41
TIMP1-202ENST00000377017 EDF1O60869 148 aaKnown RBP12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms