RNA–Protein interactions for RNA: ENST00000376854.5

C9orf40-201, Transcript of chromosome 9 open reading frame 40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf40, Length 2,327 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf40-201ENST00000376854 OR10G2Q8NGC3 310 aa24.32■■□□□ 1.48
C9orf40-201ENST00000376854 OR4K1Q8NGD4 311 aa24.32■■□□□ 1.48
C9orf40-201ENST00000376854 MCFD2Q8NI22 146 aa24.32■■□□□ 1.48
C9orf40-201ENST00000376854 MYDGFQ969H8 173 aa24.32■■□□□ 1.48
C9orf40-201ENST00000376854 ZSCAN5AQ9BUG6 496 aa24.32■■□□□ 1.48
C9orf40-201ENST00000376854 ZBTB20Q9HC78 741 aaPredicted RBP24.32■■□□□ 1.48
C9orf40-201ENST00000376854 AMBNQ9NP70 447 aa24.32■■□□□ 1.48
C9orf40-201ENST00000376854 EXO1Q9UQ84 846 aaKnown RBP24.32■■□□□ 1.48
C9orf40-201ENST00000376854 PRRC2BQ5JSZ5 2229 aaKnown RBP24.32■■□□□ 1.48
C9orf40-201ENST00000376854 AIREO43918 545 aa24.32■■□□□ 1.48
C9orf40-201ENST00000376854 ATG13O75143 517 aa24.32■■□□□ 1.48
C9orf40-201ENST00000376854 HLA-EP13747 358 aa24.32■■□□□ 1.48
C9orf40-201ENST00000376854 PRMT2P55345 433 aa24.32■■□□□ 1.48
C9orf40-201ENST00000376854 CD300CQ08708 224 aa24.32■■□□□ 1.48
C9orf40-201ENST00000376854 CATSPEREQ5SY80 951 aa24.32■■□□□ 1.48
C9orf40-201ENST00000376854 OR52J3Q8NH60 311 aa24.32■■□□□ 1.48
C9orf40-201ENST00000376854 BTN2A2Q8WVV5 523 aa24.32■■□□□ 1.48
C9orf40-201ENST00000376854 NEIL2Q969S2 332 aa24.32■■□□□ 1.48
C9orf40-201ENST00000376854 PLCXD1Q9NUJ7 323 aa24.32■■□□□ 1.48
C9orf40-201ENST00000376854 GPATCH2Q9NW75 528 aa24.32■■□□□ 1.48
C9orf40-201ENST00000376854 LEFTY1O75610 366 aa24.31■■□□□ 1.48
C9orf40-201ENST00000376854 MVDP53602 400 aa24.31■■□□□ 1.48
C9orf40-201ENST00000376854 LRRC74AQ0VAA2 488 aa24.31■■□□□ 1.48
C9orf40-201ENST00000376854 TBCEQ15813 527 aaPredicted RBP24.31■■□□□ 1.48
C9orf40-201ENST00000376854 PLEKHG7Q6ZR37 379 aa24.31■■□□□ 1.48
C9orf40-201ENST00000376854 TMPRSS11BQ86T26 416 aa24.31■■□□□ 1.48
C9orf40-201ENST00000376854 FAM83CQ9BQN1 747 aa24.31■■□□□ 1.48
C9orf40-201ENST00000376854 HEPHQ9BQS7 1158 aa24.31■■□□□ 1.48
C9orf40-201ENST00000376854 ANKHQ9HCJ1 492 aa24.31■■□□□ 1.48
C9orf40-201ENST00000376854 TMEM39AQ9NV64 488 aa24.31■■□□□ 1.48
C9orf40-201ENST00000376854 RLIMQ9NVW2 624 aa24.31■■□□□ 1.48
C9orf40-201ENST00000376854 KCNE2Q9Y6J6 123 aa24.31■■□□□ 1.48
C9orf40-201ENST00000376854 DENND4CQ5VZ89 1909 aa24.31■■□□□ 1.48
C9orf40-201ENST00000376854 SLC5A10A0PJK1 596 aa24.3■■□□□ 1.48
C9orf40-201ENST00000376854 M0R082 166 aa24.3■■□□□ 1.48
C9orf40-201ENST00000376854 NPC1O15118 1278 aa24.3■■□□□ 1.48
C9orf40-201ENST00000376854 SLC19A1P41440 591 aa24.3■■□□□ 1.48
C9orf40-201ENST00000376854 OR1E2P47887 323 aa24.3■■□□□ 1.48
C9orf40-201ENST00000376854 HBA1P69905 142 aa24.3■■□□□ 1.48
C9orf40-201ENST00000376854 SPIBQ01892 262 aa24.3■■□□□ 1.48
C9orf40-201ENST00000376854 ZNF284Q2VY69 593 aa24.3■■□□□ 1.48
C9orf40-201ENST00000376854 MED27Q6P2C8 311 aa24.3■■□□□ 1.48
C9orf40-201ENST00000376854 CCDC103Q8IW40 242 aa24.3■■□□□ 1.48
C9orf40-201ENST00000376854 DNAJC22Q8N4W6 341 aa24.3■■□□□ 1.48
C9orf40-201ENST00000376854 RHOXF1Q8NHV9 184 aa24.3■■□□□ 1.48
C9orf40-201ENST00000376854 SAMD11Q96NU1 681 aa24.3■■□□□ 1.48
C9orf40-201ENST00000376854 DACH2Q96NX9 599 aa24.3■■□□□ 1.48
C9orf40-201ENST00000376854 CORO1BQ9BR76 489 aa24.3■■□□□ 1.48
C9orf40-201ENST00000376854 BHLHE41Q9C0J9 482 aaPredicted RBP24.3■■□□□ 1.48
C9orf40-201ENST00000376854 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP24.3■■□□□ 1.48
C9orf40-201ENST00000376854 ITGB8P26012 769 aa24.3■■□□□ 1.48
C9orf40-201ENST00000376854 CCR2P41597 374 aa24.3■■□□□ 1.48
C9orf40-201ENST00000376854 PXNP49023 591 aaPredicted RBP24.3■■□□□ 1.48
C9orf40-201ENST00000376854 VEGFBP49765 207 aa24.3■■□□□ 1.48
C9orf40-201ENST00000376854 TUBA1BP68363 451 aa24.3■■□□□ 1.48
C9orf40-201ENST00000376854 ARHGEF6Q15052 776 aa24.3■■□□□ 1.48
C9orf40-201ENST00000376854 TIGD6Q17RP2 521 aa24.3■■□□□ 1.48
C9orf40-201ENST00000376854 IFI44LQ53G44 452 aa24.3■■□□□ 1.48
C9orf40-201ENST00000376854 ARSIQ5FYB1 569 aa24.3■■□□□ 1.48
C9orf40-201ENST00000376854 MLIPQ5VWP3 458 aa24.3■■□□□ 1.48
C9orf40-201ENST00000376854 SLCO4C1Q6ZQN7 724 aa24.3■■□□□ 1.48
C9orf40-201ENST00000376854 TUBA1AQ71U36 451 aa24.3■■□□□ 1.48
C9orf40-201ENST00000376854 CADM3Q8N126 398 aa24.3■■□□□ 1.48
C9orf40-201ENST00000376854 CXorf40BQ96DE9 158 aa24.3■■□□□ 1.48
C9orf40-201ENST00000376854 FOPNLQ96NB1 174 aa24.3■■□□□ 1.48
C9orf40-201ENST00000376854 PSD2Q9BQI7 771 aa24.3■■□□□ 1.48
C9orf40-201ENST00000376854 SLC35A5Q9BS91 424 aa24.3■■□□□ 1.48
C9orf40-201ENST00000376854 CCM2Q9BSQ5 444 aa24.3■■□□□ 1.48
C9orf40-201ENST00000376854 REEP4Q9H6H4 257 aa24.3■■□□□ 1.48
C9orf40-201ENST00000376854 HCFC1R1Q9NWW0 138 aa24.3■■□□□ 1.48
C9orf40-201ENST00000376854 ATP6V1HQ9UI12 483 aa24.3■■□□□ 1.48
C9orf40-201ENST00000376854 TMEM221A6NGB7 291 aa24.29■■□□□ 1.48
C9orf40-201ENST00000376854 CLCA1A8K7I4 914 aa24.29■■□□□ 1.48
C9orf40-201ENST00000376854 TIMP2P16035 220 aa24.29■■□□□ 1.48
C9orf40-201ENST00000376854 ZNF8P17098 575 aaPredicted RBP24.29■■□□□ 1.48
C9orf40-201ENST00000376854 PDHA2P29803 388 aa24.29■■□□□ 1.48
C9orf40-201ENST00000376854 PBLDP30039 288 aaPredicted RBP24.29■■□□□ 1.48
C9orf40-201ENST00000376854 IDH2P48735 452 aaKnown RBP24.29■■□□□ 1.48
C9orf40-201ENST00000376854 CDH12P55289 794 aa24.29■■□□□ 1.48
C9orf40-201ENST00000376854 MAPK11Q15759 364 aa24.29■■□□□ 1.48
C9orf40-201ENST00000376854 OTOP2Q7RTS6 562 aa24.29■■□□□ 1.48
C9orf40-201ENST00000376854 ADIPOR2Q86V24 386 aa24.29■■□□□ 1.48
C9orf40-201ENST00000376854 OR4C15Q8NGM1 316 aa24.29■■□□□ 1.48
C9orf40-201ENST00000376854 GGHQ92820 318 aa24.29■■□□□ 1.48
C9orf40-201ENST00000376854 SPASTQ9UBP0 616 aa24.29■■□□□ 1.48
C9orf40-201ENST00000376854 TNFRSF21O75509 655 aa24.29■■□□□ 1.48
C9orf40-201ENST00000376854 C6orf47O95873 294 aa24.29■■□□□ 1.48
C9orf40-201ENST00000376854 GBAP04062 536 aa24.29■■□□□ 1.48
C9orf40-201ENST00000376854 CDK1P06493 297 aa24.29■■□□□ 1.48
C9orf40-201ENST00000376854 C8AP07357 584 aa24.29■■□□□ 1.48
C9orf40-201ENST00000376854 ANXA8P13928 327 aa24.29■■□□□ 1.48
C9orf40-201ENST00000376854 UGT2B10P36537 528 aa24.29■■□□□ 1.48
C9orf40-201ENST00000376854 PRLHRP49683 370 aa24.29■■□□□ 1.48
C9orf40-201ENST00000376854 PPP5CP53041 499 aa24.29■■□□□ 1.48
C9orf40-201ENST00000376854 ZNF763Q0D2J5 394 aa24.29■■□□□ 1.48
C9orf40-201ENST00000376854 GCNT6Q5T4J0 391 aa24.29■■□□□ 1.48
C9orf40-201ENST00000376854 PSMA8Q8TAA3 256 aa24.29■■□□□ 1.48
C9orf40-201ENST00000376854 POFUT2Q9Y2G5 429 aa24.29■■□□□ 1.48
C9orf40-201ENST00000376854 PCDHGA2Q9Y5H1 932 aa24.29■■□□□ 1.48
C9orf40-201ENST00000376854 GADD45AP24522 165 aa24.28■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms