RNA–Protein interactions for RNA: ENST00000376707.4

VSX1-201, Transcript of visual system homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene VSX1, Length 943 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-201ENST00000376707 CHST10O43529 356 aa19.79■□□□□ 0.76
VSX1-201ENST00000376707 ZNF888P0CJ79 500 aaPredicted RBP19.79■□□□□ 0.76
VSX1-201ENST00000376707 ZNF37AP17032 561 aaPredicted RBP19.79■□□□□ 0.76
VSX1-201ENST00000376707 SCTRP47872 440 aa19.79■□□□□ 0.76
VSX1-201ENST00000376707 OLR1P78380 273 aa19.79■□□□□ 0.76
VSX1-201ENST00000376707 PMP22Q01453 160 aa19.79■□□□□ 0.76
VSX1-201ENST00000376707 TUBA3CQ13748 450 aa19.79■□□□□ 0.76
VSX1-201ENST00000376707 USP10Q14694 798 aaKnown RBP19.79■□□□□ 0.76
VSX1-201ENST00000376707 TUBA3EQ6PEY2 450 aa19.79■□□□□ 0.76
VSX1-201ENST00000376707 THOC6Q86W42 341 aaKnown RBP19.79■□□□□ 0.76
VSX1-201ENST00000376707 SLC34A3Q8N130 599 aa19.79■□□□□ 0.76
VSX1-201ENST00000376707 NKAPQ8N5F7 415 aaKnown RBP19.79■□□□□ 0.76
VSX1-201ENST00000376707 SLC5A8Q8N695 610 aa19.79■□□□□ 0.76
VSX1-201ENST00000376707 NT5CQ8TCD5 201 aa19.79■□□□□ 0.76
VSX1-201ENST00000376707 ANKRD7Q92527 254 aa19.79■□□□□ 0.76
VSX1-201ENST00000376707 MCMBPQ9BTE3 642 aa19.79■□□□□ 0.76
VSX1-201ENST00000376707 SPNS1Q9H2V7 528 aa19.79■□□□□ 0.76
VSX1-201ENST00000376707 ANKRD10Q9NXR5 420 aa19.79■□□□□ 0.76
VSX1-201ENST00000376707 IKZF3Q9UKT9 509 aa19.79■□□□□ 0.76
VSX1-201ENST00000376707 CROCCQ5TZA2 2017 aa19.78■□□□□ 0.76
VSX1-201ENST00000376707 B3GALT4O96024 378 aa19.78■□□□□ 0.76
VSX1-201ENST00000376707 AHRP35869 848 aa19.78■□□□□ 0.76
VSX1-201ENST00000376707 TAS2R50P59544 299 aa19.78■□□□□ 0.76
VSX1-201ENST00000376707 REEP5Q00765 189 aa19.78■□□□□ 0.76
VSX1-201ENST00000376707 RBPJQ06330 500 aa19.78■□□□□ 0.76
VSX1-201ENST00000376707 PPP1R3AQ16821 1122 aa19.78■□□□□ 0.76
VSX1-201ENST00000376707 TMPRSS11BQ86T26 416 aa19.78■□□□□ 0.76
VSX1-201ENST00000376707 SPATA4Q8NEY3 305 aa19.78■□□□□ 0.76
VSX1-201ENST00000376707 EGFL8Q99944 293 aa19.78■□□□□ 0.76
VSX1-201ENST00000376707 AIF1LQ9BQI0 150 aa19.78■□□□□ 0.76
VSX1-201ENST00000376707 ERP44Q9BS26 406 aa19.78■□□□□ 0.76
VSX1-201ENST00000376707 PELI2Q9HAT8 420 aa19.78■□□□□ 0.76
VSX1-201ENST00000376707 NSMCE4AQ9NXX6 385 aa19.78■□□□□ 0.76
VSX1-201ENST00000376707 WHRNQ9P202 907 aa19.78■□□□□ 0.76
VSX1-201ENST00000376707 COPG2Q9UBF2 871 aa19.78■□□□□ 0.76
VSX1-201ENST00000376707 SUCOQ9UBS9 1254 aaKnown RBP19.78■□□□□ 0.76
VSX1-201ENST00000376707 PCDHGB6Q9Y5F9 930 aa19.78■□□□□ 0.76
VSX1-201ENST00000376707 KCNE2Q9Y6J6 123 aa19.78■□□□□ 0.76
VSX1-201ENST00000376707 SVILO95425 2214 aa19.78■□□□□ 0.76
VSX1-201ENST00000376707 FAM95CA0A1B0GW59 222 aa19.77■□□□□ 0.76
VSX1-201ENST00000376707 NPEPPSL1A6NEC2 478 aa19.77■□□□□ 0.76
VSX1-201ENST00000376707 FAM187AA6NFU0 413 aa19.77■□□□□ 0.76
VSX1-201ENST00000376707 URADA6NGE7 173 aa19.77■□□□□ 0.76
VSX1-201ENST00000376707 CDC7O00311 574 aa19.77■□□□□ 0.76
VSX1-201ENST00000376707 B4GALT2O60909 372 aa19.77■□□□□ 0.76
VSX1-201ENST00000376707 DNAJB6O75190 326 aa19.77■□□□□ 0.76
VSX1-201ENST00000376707 CD96P40200 585 aa19.77■□□□□ 0.76
VSX1-201ENST00000376707 HNF4AP41235 474 aa19.77■□□□□ 0.76
VSX1-201ENST00000376707 SLC26A5P58743 744 aa19.77■□□□□ 0.76
VSX1-201ENST00000376707 OC90Q02509 493 aaPredicted RBP19.77■□□□□ 0.76
VSX1-201ENST00000376707 ILF2Q12905 390 aaKnown RBP19.77■□□□□ 0.76
VSX1-201ENST00000376707 RBBP5Q15291 538 aaKnown RBP19.77■□□□□ 0.76
VSX1-201ENST00000376707 OR1C1Q15619 314 aa19.77■□□□□ 0.76
VSX1-201ENST00000376707 ZNF800Q2TB10 664 aaPredicted RBP eCLIP19.77■□□□□ 0.76
VSX1-201ENST00000376707 ZBED8Q8IZ13 594 aa19.77■□□□□ 0.76
VSX1-201ENST00000376707 TRPV3Q8NET8 790 aa19.77■□□□□ 0.76
VSX1-201ENST00000376707 UTP15Q8TED0 518 aaKnown RBP19.77■□□□□ 0.76
VSX1-201ENST00000376707 SIGLEC12Q96PQ1 595 aa19.77■□□□□ 0.76
VSX1-201ENST00000376707 NPAS2Q99743 824 aa19.77■□□□□ 0.76
VSX1-201ENST00000376707 KLHL1Q9NR64 748 aa19.77■□□□□ 0.76
VSX1-201ENST00000376707 SLC22A14Q9Y267 594 aa19.77■□□□□ 0.76
VSX1-201ENST00000376707 SCN3AQ9NY46 2000 aa19.76■□□□□ 0.75
VSX1-201ENST00000376707 GABRR3A8MPY1 467 aa19.76■□□□□ 0.75
VSX1-201ENST00000376707 PRSS44E7EML9 344 aa19.76■□□□□ 0.75
VSX1-201ENST00000376707 CD46P15529 392 aa19.76■□□□□ 0.75
VSX1-201ENST00000376707 ST13P50502 369 aaKnown RBP19.76■□□□□ 0.75
VSX1-201ENST00000376707 RAB8AP61006 207 aa19.76■□□□□ 0.75
VSX1-201ENST00000376707 ZNF460Q14592 562 aa19.76■□□□□ 0.75
VSX1-201ENST00000376707 NXPE4Q6UWF7 544 aa19.76■□□□□ 0.75
VSX1-201ENST00000376707 FRA10AC1Q70Z53 315 aa19.76■□□□□ 0.75
VSX1-201ENST00000376707 MAATS1Q7Z4T9 603 aa19.76■□□□□ 0.75
VSX1-201ENST00000376707 CYP4X1Q8N118 509 aa19.76■□□□□ 0.75
VSX1-201ENST00000376707 HORMAD2Q8N7B1 307 aa19.76■□□□□ 0.75
VSX1-201ENST00000376707 ANKRD53Q8N9V6 530 aa19.76■□□□□ 0.75
VSX1-201ENST00000376707 MDS2Q8NDY4 140 aa19.76■□□□□ 0.75
VSX1-201ENST00000376707 VPS39Q96JC1 886 aa19.76■□□□□ 0.75
VSX1-201ENST00000376707 PTCHD1Q96NR3 888 aa19.76■□□□□ 0.75
VSX1-201ENST00000376707 RHOJQ9H4E5 214 aa19.76■□□□□ 0.75
VSX1-201ENST00000376707 CLK4Q9HAZ1 481 aaKnown RBP19.76■□□□□ 0.75
VSX1-201ENST00000376707 ENTPD4Q9Y227 616 aa19.76■□□□□ 0.75
VSX1-201ENST00000376707 ZGRF1Q86YA3 2104 aa19.76■□□□□ 0.75
VSX1-201ENST00000376707 PSMD12O00232 456 aaPredicted RBP19.75■□□□□ 0.75
VSX1-201ENST00000376707 CCL21O00585 134 aa19.75■□□□□ 0.75
VSX1-201ENST00000376707 EIF3HO15372 352 aaKnown RBP eCLIP19.75■□□□□ 0.75
VSX1-201ENST00000376707 MAN1A2O60476 641 aa19.75■□□□□ 0.75
VSX1-201ENST00000376707 PRMT3O60678 531 aa19.75■□□□□ 0.75
VSX1-201ENST00000376707 MLYCDO95822 493 aa19.75■□□□□ 0.75
VSX1-201ENST00000376707 EEF1DP29692 281 aaKnown RBP19.75■□□□□ 0.75
VSX1-201ENST00000376707 HNMTP50135 292 aa19.75■□□□□ 0.75
VSX1-201ENST00000376707 TAS2R39P59534 338 aa19.75■□□□□ 0.75
VSX1-201ENST00000376707 MRPS25P82663 173 aaKnown RBP19.75■□□□□ 0.75
VSX1-201ENST00000376707 CDKL1Q00532 357 aa19.75■□□□□ 0.75
VSX1-201ENST00000376707 CALCOCO2Q13137 446 aa19.75■□□□□ 0.75
VSX1-201ENST00000376707 SPINK14Q6IE38 97 aa19.75■□□□□ 0.75
VSX1-201ENST00000376707 LGI4Q8N135 537 aa19.75■□□□□ 0.75
VSX1-201ENST00000376707 TMEM178AQ8NBL3 297 aa19.75■□□□□ 0.75
VSX1-201ENST00000376707 HES7Q9BYE0 225 aa19.75■□□□□ 0.75
VSX1-201ENST00000376707 SLC6A16Q9GZN6 736 aa19.75■□□□□ 0.75
VSX1-201ENST00000376707 RHBGQ9H310 441 aa19.75■□□□□ 0.75
VSX1-201ENST00000376707 CDCP1Q9H5V8 836 aa19.75■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms