RNA–Protein interactions for RNA: ENST00000375759.7

SPEN-201, Transcript of spen family transcriptional repressor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPEN, Length 12,232 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPEN-201ENST00000375759 PCDH10Q9P2E7 1040 aa9.53□□□□□ -0.88
SPEN-201ENST00000375759 SRRDQ9UH36 339 aa9.53□□□□□ -0.88
SPEN-201ENST00000375759 CCL16O15467 120 aa9.53□□□□□ -0.88
SPEN-201ENST00000375759 PORP16435 677 aaPredicted RBP9.53□□□□□ -0.88
SPEN-201ENST00000375759 ZNF182P17025 639 aaPredicted RBP9.53□□□□□ -0.88
SPEN-201ENST00000375759 NDUFV1P49821 464 aa9.53□□□□□ -0.88
SPEN-201ENST00000375759 PLPP4Q5VZY2 271 aa9.53□□□□□ -0.88
SPEN-201ENST00000375759 FBXL3Q9UKT7 428 aa9.53□□□□□ -0.88
SPEN-201ENST00000375759 UBR1Q8IWV7 1749 aa9.53□□□□□ -0.88
SPEN-201ENST00000375759 MROH1Q8NDA8 1641 aa9.53□□□□□ -0.88
SPEN-201ENST00000375759 NID2Q14112 1375 aa9.53□□□□□ -0.88
SPEN-201ENST00000375759 A0A1W2PPW3 197 aa9.53□□□□□ -0.88
SPEN-201ENST00000375759 CREBL2O60519 120 aaPredicted RBP9.53□□□□□ -0.88
SPEN-201ENST00000375759 DDNO94850 711 aaPredicted RBP9.53□□□□□ -0.88
SPEN-201ENST00000375759 TCEA1P23193 301 aaKnown RBP9.53□□□□□ -0.88
SPEN-201ENST00000375759 GABARAPL2P60520 117 aa9.53□□□□□ -0.88
SPEN-201ENST00000375759 ST3GAL4Q11206 333 aa9.53□□□□□ -0.88
SPEN-201ENST00000375759 FADDQ13158 208 aa9.53□□□□□ -0.88
SPEN-201ENST00000375759 NPAS3Q8IXF0 933 aa9.53□□□□□ -0.88
SPEN-201ENST00000375759 PHTF2Q8N3S3 785 aa9.53□□□□□ -0.88
SPEN-201ENST00000375759 DNAJC27Q9NZQ0 273 aa9.53□□□□□ -0.88
SPEN-201ENST00000375759 HAS3O00219 553 aa9.53□□□□□ -0.88
SPEN-201ENST00000375759 TREHO43280 583 aa9.53□□□□□ -0.88
SPEN-201ENST00000375759 SSX5O60225 188 aa9.53□□□□□ -0.88
SPEN-201ENST00000375759 DLX3O60479 287 aa9.53□□□□□ -0.88
SPEN-201ENST00000375759 CSF2P04141 144 aa9.53□□□□□ -0.88
SPEN-201ENST00000375759 ACTC1P68032 377 aa9.53□□□□□ -0.88
SPEN-201ENST00000375759 ACTA1P68133 377 aa9.53□□□□□ -0.88
SPEN-201ENST00000375759 OR4F3Q6IEY1 312 aa9.53□□□□□ -0.88
SPEN-201ENST00000375759 RBM12BQ8IXT5 1001 aaKnown RBP9.53□□□□□ -0.88
SPEN-201ENST00000375759 OSBPL2Q9H1P3 480 aa9.53□□□□□ -0.88
SPEN-201ENST00000375759 ST14Q9Y5Y6 855 aa9.53□□□□□ -0.88
SPEN-201ENST00000375759 DCCP43146 1447 aa9.53□□□□□ -0.88
SPEN-201ENST00000375759 GRID2O43424 1007 aa9.53□□□□□ -0.88
SPEN-201ENST00000375759 OAZ2O95190 189 aa9.53□□□□□ -0.88
SPEN-201ENST00000375759 TRAM2Q15035 370 aa9.53□□□□□ -0.88
SPEN-201ENST00000375759 MARVELD2Q8N4S9 558 aa9.53□□□□□ -0.88
SPEN-201ENST00000375759 GNPDA2Q8TDQ7 276 aa9.53□□□□□ -0.88
SPEN-201ENST00000375759 TPT1P8Q9HAU6 139 aa9.53□□□□□ -0.88
SPEN-201ENST00000375759 PCDHB14Q9Y5E9 798 aa9.53□□□□□ -0.88
SPEN-201ENST00000375759 EIF1AYO14602 144 aaKnown RBP9.53□□□□□ -0.88
SPEN-201ENST00000375759 SIX3O95343 332 aaPredicted RBP9.53□□□□□ -0.88
SPEN-201ENST00000375759 EIF1AXP47813 144 aaKnown RBP9.53□□□□□ -0.88
SPEN-201ENST00000375759 ABRAXAS2Q15018 415 aa9.53□□□□□ -0.88
SPEN-201ENST00000375759 VARS2Q5ST30 1063 aaKnown RBP9.53□□□□□ -0.88
SPEN-201ENST00000375759 FUT10Q6P4F1 479 aa9.53□□□□□ -0.88
SPEN-201ENST00000375759 BRAT1Q6PJG6 821 aa9.53□□□□□ -0.88
SPEN-201ENST00000375759 FAM86B1Q8N7N1 296 aa9.53□□□□□ -0.88
SPEN-201ENST00000375759 KCTD13Q8WZ19 329 aa9.53□□□□□ -0.88
SPEN-201ENST00000375759 RIOK2Q9BVS4 552 aaKnown RBP9.53□□□□□ -0.88
SPEN-201ENST00000375759 TSSK6Q9BXA6 273 aa9.53□□□□□ -0.88
SPEN-201ENST00000375759 TMEM59LQ9UK28 342 aa9.53□□□□□ -0.88
SPEN-201ENST00000375759 CDC7O00311 574 aa9.53□□□□□ -0.88
SPEN-201ENST00000375759 SPATA31D3P0C874 917 aa9.53□□□□□ -0.88
SPEN-201ENST00000375759 MAP2K3P46734 347 aa9.53□□□□□ -0.88
SPEN-201ENST00000375759 TAS2R50P59544 299 aa9.53□□□□□ -0.88
SPEN-201ENST00000375759 SPATA31D4Q6ZUB0 917 aa9.53□□□□□ -0.88
SPEN-201ENST00000375759 TRUB1Q8WWH5 349 aaKnown RBP9.53□□□□□ -0.88
SPEN-201ENST00000375759 TREX2Q9BQ50 279 aaPredicted RBP9.53□□□□□ -0.88
SPEN-201ENST00000375759 ZNF649Q9BS31 505 aa9.53□□□□□ -0.88
SPEN-201ENST00000375759 EIF5A2Q9GZV4 153 aaKnown RBP9.53□□□□□ -0.88
SPEN-201ENST00000375759 IKZF4Q9H2S9 585 aa9.53□□□□□ -0.88
SPEN-201ENST00000375759 DPEP3Q9H4B8 488 aa9.53□□□□□ -0.88
SPEN-201ENST00000375759 SDHAF3Q9NRP4 125 aa9.53□□□□□ -0.88
SPEN-201ENST00000375759 SLC22A14Q9Y267 594 aa9.53□□□□□ -0.88
SPEN-201ENST00000375759 OPN1SWP03999 348 aa9.52□□□□□ -0.88
SPEN-201ENST00000375759 CCND3P30281 292 aaPredicted RBP9.52□□□□□ -0.88
SPEN-201ENST00000375759 RORAP35398 523 aa9.52□□□□□ -0.88
SPEN-201ENST00000375759 COL28A1Q2UY09 1125 aa9.52□□□□□ -0.88
SPEN-201ENST00000375759 LRRC66Q68CR7 880 aa9.52□□□□□ -0.88
SPEN-201ENST00000375759 TSPAN33Q86UF1 283 aa9.52□□□□□ -0.88
SPEN-201ENST00000375759 ZNF584Q8IVC4 421 aa9.52□□□□□ -0.88
SPEN-201ENST00000375759 TMEM185BQ9H7F4 350 aa9.52□□□□□ -0.88
SPEN-201ENST00000375759 NEMP2A6NFY4 417 aa9.52□□□□□ -0.88
SPEN-201ENST00000375759 CXorf49A8MYA2 514 aaPredicted RBP9.52□□□□□ -0.88
SPEN-201ENST00000375759 NARSO43776 548 aaKnown RBP9.52□□□□□ -0.88
SPEN-201ENST00000375759 FUT4P22083 530 aa9.52□□□□□ -0.88
SPEN-201ENST00000375759 PCLAFQ15004 111 aa9.52□□□□□ -0.88
SPEN-201ENST00000375759 SCML4Q8N228 414 aa9.52□□□□□ -0.88
SPEN-201ENST00000375759 OR5T2Q8NGG2 359 aa9.52□□□□□ -0.88
SPEN-201ENST00000375759 OR14K1Q8NGZ2 314 aa9.52□□□□□ -0.88
SPEN-201ENST00000375759 KIAA1191Q96A73 305 aa9.52□□□□□ -0.88
SPEN-201ENST00000375759 YIPF4Q9BSR8 244 aa9.52□□□□□ -0.88
SPEN-201ENST00000375759 CCDC32Q9BV29 185 aa9.52□□□□□ -0.88
SPEN-201ENST00000375759 KATNBL1Q9H079 304 aa9.52□□□□□ -0.88
SPEN-201ENST00000375759 OR2AG1Q9H205 316 aa9.52□□□□□ -0.88
SPEN-201ENST00000375759 YJEFN3A6XGL0 299 aa9.52□□□□□ -0.89
SPEN-201ENST00000375759 F5H0A9 414 aaPredicted RBP9.52□□□□□ -0.89
SPEN-201ENST00000375759 CH25HO95992 272 aa9.52□□□□□ -0.89
SPEN-201ENST00000375759 DLDP09622 509 aaKnown RBP9.52□□□□□ -0.89
SPEN-201ENST00000375759 EBLN1P0CF75 366 aa9.52□□□□□ -0.89
SPEN-201ENST00000375759 ZNF33AQ06730 810 aa9.52□□□□□ -0.89
SPEN-201ENST00000375759 LNX2Q8N448 690 aa9.52□□□□□ -0.89
SPEN-201ENST00000375759 AVL9Q8NBF6 648 aa9.52□□□□□ -0.89
SPEN-201ENST00000375759 POGLUT1Q8NBL1 392 aa9.52□□□□□ -0.89
SPEN-201ENST00000375759 ELP5Q8TE02 316 aa9.52□□□□□ -0.89
SPEN-201ENST00000375759 ESAMQ96AP7 390 aa9.52□□□□□ -0.89
SPEN-201ENST00000375759 BORCS8Q96FH0 119 aa9.52□□□□□ -0.89
SPEN-201ENST00000375759 MTG2Q9H4K7 406 aa9.52□□□□□ -0.89
SPEN-201ENST00000375759 PNO1Q9NRX1 252 aaKnown RBP9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms