RNA–Protein interactions for RNA: ENST00000374487.6

HMGCL-202, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

TSL 2

Gene HMGCL, Length 2,151 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-202ENST00000374487 E2F2Q14209 437 aa11.61□□□□□ -0.55
HMGCL-202ENST00000374487 FAM46CQ5VWP2 391 aa11.61□□□□□ -0.55
HMGCL-202ENST00000374487 ANGPTL8Q6UXH0 198 aa11.61□□□□□ -0.55
HMGCL-202ENST00000374487 AMZ2Q86W34 360 aa11.61□□□□□ -0.55
HMGCL-202ENST00000374487 CLVS1Q8IUQ0 354 aaPredicted RBP11.61□□□□□ -0.55
HMGCL-202ENST00000374487 ARL10Q8N8L6 244 aa11.61□□□□□ -0.55
HMGCL-202ENST00000374487 PLA2G15Q8NCC3 412 aa11.61□□□□□ -0.55
HMGCL-202ENST00000374487 OR4A15Q8NGL6 344 aa11.61□□□□□ -0.55
HMGCL-202ENST00000374487 RAB7BQ96AH8 199 aa11.61□□□□□ -0.55
HMGCL-202ENST00000374487 NPLQ9BXD5 320 aaPredicted RBP11.61□□□□□ -0.55
HMGCL-202ENST00000374487 ASPSCR1Q9BZE9 553 aa11.61□□□□□ -0.55
HMGCL-202ENST00000374487 EHD1Q9H4M9 534 aa11.61□□□□□ -0.55
HMGCL-202ENST00000374487 POLR1BQ9H9Y6 1135 aa11.61□□□□□ -0.55
HMGCL-202ENST00000374487 IL1RAPQ9NPH3 570 aa11.61□□□□□ -0.55
HMGCL-202ENST00000374487 FZD4Q9ULV1 537 aa11.61□□□□□ -0.55
HMGCL-202ENST00000374487 VPS4AQ9UN37 437 aa11.61□□□□□ -0.55
HMGCL-202ENST00000374487 CORO2BQ9UQ03 480 aa11.61□□□□□ -0.55
HMGCL-202ENST00000374487 ERVK-11Q9UQG0 969 aa11.61□□□□□ -0.55
HMGCL-202ENST00000374487 SH2B3Q9UQQ2 575 aa11.61□□□□□ -0.55
HMGCL-202ENST00000374487 MYO1GB0I1T2 1018 aa11.6□□□□□ -0.55
HMGCL-202ENST00000374487 IDSP22304 550 aa11.6□□□□□ -0.55
HMGCL-202ENST00000374487 ACADLP28330 430 aa11.6□□□□□ -0.55
HMGCL-202ENST00000374487 HLCSP50747 726 aa11.6□□□□□ -0.55
HMGCL-202ENST00000374487 RAD23AP54725 363 aa11.6□□□□□ -0.55
HMGCL-202ENST00000374487 PHEXP78562 749 aa11.6□□□□□ -0.55
HMGCL-202ENST00000374487 LRRC74AQ0VAA2 488 aa11.6□□□□□ -0.55
HMGCL-202ENST00000374487 CNTN1Q12860 1018 aa11.6□□□□□ -0.55
HMGCL-202ENST00000374487 BIRC2Q13490 618 aa11.6□□□□□ -0.55
HMGCL-202ENST00000374487 CAMK2GQ13555 558 aaPredicted RBP11.6□□□□□ -0.55
HMGCL-202ENST00000374487 ANGPT1Q15389 498 aa11.6□□□□□ -0.55
HMGCL-202ENST00000374487 GALNT18Q6P9A2 607 aa11.6□□□□□ -0.55
HMGCL-202ENST00000374487 NXPE4Q6UWF7 544 aa11.6□□□□□ -0.55
HMGCL-202ENST00000374487 UNC5DQ6UXZ4 953 aa11.6□□□□□ -0.55
HMGCL-202ENST00000374487 TMEM26Q6ZUK4 368 aa11.6□□□□□ -0.55
HMGCL-202ENST00000374487 KCTD8Q6ZWB6 473 aa11.6□□□□□ -0.55
HMGCL-202ENST00000374487 CHST15Q7LFX5 561 aaPredicted RBP11.6□□□□□ -0.55
HMGCL-202ENST00000374487 COMMD6Q7Z4G1 85 aa11.6□□□□□ -0.55
HMGCL-202ENST00000374487 CAMKMTQ7Z624 323 aa11.6□□□□□ -0.55
HMGCL-202ENST00000374487 TMEM179BQ7Z7N9 219 aa11.6□□□□□ -0.55
HMGCL-202ENST00000374487 GALNT10Q86SR1 603 aa11.6□□□□□ -0.55
HMGCL-202ENST00000374487 CACUL1Q86Y37 369 aa11.6□□□□□ -0.55
HMGCL-202ENST00000374487 LAS2Q8IYD9 372 aa11.6□□□□□ -0.55
HMGCL-202ENST00000374487 C2orf73Q8N5S3 287 aaPredicted RBP11.6□□□□□ -0.55
HMGCL-202ENST00000374487 UBE2E3Q969T4 207 aa11.6□□□□□ -0.55
HMGCL-202ENST00000374487 RAD51AP1Q96B01 352 aa11.6□□□□□ -0.55
HMGCL-202ENST00000374487 COQ8BQ96D53 544 aa11.6□□□□□ -0.55
HMGCL-202ENST00000374487 WDR34Q96EX3 536 aa11.6□□□□□ -0.55
HMGCL-202ENST00000374487 MBOAT4Q96T53 435 aa11.6□□□□□ -0.55
HMGCL-202ENST00000374487 HDAC8Q9BY41 377 aa11.6□□□□□ -0.55
HMGCL-202ENST00000374487 OR51B5Q9H339 312 aa11.6□□□□□ -0.55
HMGCL-202ENST00000374487 PRSS16Q9NQE7 514 aa11.6□□□□□ -0.55
HMGCL-202ENST00000374487 DMRT3Q9NQL9 472 aa11.6□□□□□ -0.55
HMGCL-202ENST00000374487 ATAD3AQ9NVI7 634 aa11.6□□□□□ -0.55
HMGCL-202ENST00000374487 MRPS17Q9Y2R5 130 aaKnown RBP11.6□□□□□ -0.55
HMGCL-202ENST00000374487 TDRKHQ9Y2W6 561 aaKnown RBP11.6□□□□□ -0.55
HMGCL-202ENST00000374487 hCG_2039718K7EN88 272 aa11.6□□□□□ -0.55
HMGCL-202ENST00000374487 GALR2O43603 387 aaPredicted RBP11.6□□□□□ -0.55
HMGCL-202ENST00000374487 KAT7O95251 611 aa11.6□□□□□ -0.55
HMGCL-202ENST00000374487 PCCBP05166 539 aa11.6□□□□□ -0.55
HMGCL-202ENST00000374487 FABP3P05413 133 aa11.6□□□□□ -0.55
HMGCL-202ENST00000374487 PCSK6P29122 969 aa11.6□□□□□ -0.55
HMGCL-202ENST00000374487 TTKP33981 857 aa11.6□□□□□ -0.55
HMGCL-202ENST00000374487 SHMT2P34897 504 aa11.6□□□□□ -0.55
HMGCL-202ENST00000374487 WASP42768 502 aa11.6□□□□□ -0.55
HMGCL-202ENST00000374487 MAGEA2P43356 314 aa11.6□□□□□ -0.55
HMGCL-202ENST00000374487 GRSF1Q12849 480 aaKnown RBP eCLIP11.6□□□□□ -0.55
HMGCL-202ENST00000374487 KCNAB2Q13303 367 aa11.6□□□□□ -0.55
HMGCL-202ENST00000374487 TMEM259Q4ZIN3 620 aa11.6□□□□□ -0.55
HMGCL-202ENST00000374487 OR2T5Q6IEZ7 315 aa11.6□□□□□ -0.55
HMGCL-202ENST00000374487 SHQ1Q6PI26 577 aaKnown RBP11.6□□□□□ -0.55
HMGCL-202ENST00000374487 FAM83HQ6ZRV2 1179 aaPredicted RBP11.6□□□□□ -0.55
HMGCL-202ENST00000374487 HEATR4Q86WZ0 1026 aa11.6□□□□□ -0.55
HMGCL-202ENST00000374487 PTOV1Q86YD1 416 aa11.6□□□□□ -0.55
HMGCL-202ENST00000374487 ERI1Q8IV48 349 aaKnown RBP11.6□□□□□ -0.55
HMGCL-202ENST00000374487 C1orf210Q8IVY1 113 aa11.6□□□□□ -0.55
HMGCL-202ENST00000374487 PGBD3Q8N328 593 aa11.6□□□□□ -0.55
HMGCL-202ENST00000374487 OR2T29Q8NH02 315 aa11.6□□□□□ -0.55
HMGCL-202ENST00000374487 RPLP0P6Q8NHW5 317 aa11.6□□□□□ -0.55
HMGCL-202ENST00000374487 SETD7Q8WTS6 366 aaKnown RBP11.6□□□□□ -0.55
HMGCL-202ENST00000374487 CXorf40BQ96DE9 158 aa11.6□□□□□ -0.55
HMGCL-202ENST00000374487 NELL2Q99435 816 aa11.6□□□□□ -0.55
HMGCL-202ENST00000374487 ZDHHC5Q9C0B5 715 aa11.6□□□□□ -0.55
HMGCL-202ENST00000374487 AMBRA1Q9C0C7 1298 aa11.6□□□□□ -0.55
HMGCL-202ENST00000374487 REEP4Q9H6H4 257 aa11.6□□□□□ -0.55
HMGCL-202ENST00000374487 CXorf21Q9HAI6 301 aa11.6□□□□□ -0.55
HMGCL-202ENST00000374487 SPASTQ9UBP0 616 aa11.6□□□□□ -0.55
HMGCL-202ENST00000374487 FAF1Q9UNN5 650 aaPredicted RBP11.6□□□□□ -0.55
HMGCL-202ENST00000374487 CACNA1IQ9P0X4 2223 aa11.59□□□□□ -0.55
HMGCL-202ENST00000374487 LOC100130705A0A1B0GUX0 176 aa11.59□□□□□ -0.55
HMGCL-202ENST00000374487 IGLON5A6NGN9 336 aa11.59□□□□□ -0.55
HMGCL-202ENST00000374487 RNASET2O00584 256 aaKnown RBP11.59□□□□□ -0.55
HMGCL-202ENST00000374487 B4GAT1O43505 415 aa11.59□□□□□ -0.55
HMGCL-202ENST00000374487 PCDH8O95206 1070 aa11.59□□□□□ -0.55
HMGCL-202ENST00000374487 KELP23276 732 aa11.59□□□□□ -0.55
HMGCL-202ENST00000374487 TIE1P35590 1138 aa11.59□□□□□ -0.55
HMGCL-202ENST00000374487 CSTF1Q05048 431 aaKnown RBP11.59□□□□□ -0.55
HMGCL-202ENST00000374487 VEZF1Q14119 521 aa11.59□□□□□ -0.55
HMGCL-202ENST00000374487 C16orf72Q14CZ0 275 aa11.59□□□□□ -0.55
HMGCL-202ENST00000374487 NEDD8Q15843 81 aa11.59□□□□□ -0.55
HMGCL-202ENST00000374487 RFX4Q33E94 735 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms