RNA–Protein interactions for RNA: ENST00000374426.6

CXCL12-202, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 1 (best) BASIC

Gene CXCL12, Length 470 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-202ENST00000374426 ASB1Q9Y576 335 aa12.94□□□□□ -0.34
CXCL12-202ENST00000374426 E9PLN8 166 aa12.93□□□□□ -0.34
CXCL12-202ENST00000374426 NDUFS4O43181 175 aa12.93□□□□□ -0.34
CXCL12-202ENST00000374426 CHST10O43529 356 aa12.93□□□□□ -0.34
CXCL12-202ENST00000374426 B3GALT4O96024 378 aa12.93□□□□□ -0.34
CXCL12-202ENST00000374426 KRT14P02533 472 aa12.93□□□□□ -0.34
CXCL12-202ENST00000374426 C8GP07360 202 aa12.93□□□□□ -0.34
CXCL12-202ENST00000374426 CCND1P24385 295 aa12.93□□□□□ -0.34
CXCL12-202ENST00000374426 TPP2P29144 1249 aaPredicted RBP12.93□□□□□ -0.34
CXCL12-202ENST00000374426 GRK3P35626 688 aa12.93□□□□□ -0.34
CXCL12-202ENST00000374426 OLR1P78380 273 aa12.93□□□□□ -0.34
CXCL12-202ENST00000374426 MEF2AQ02078 507 aaPredicted RBP12.93□□□□□ -0.34
CXCL12-202ENST00000374426 SP140Q13342 867 aa12.93□□□□□ -0.34
CXCL12-202ENST00000374426 DEFB134Q4QY38 66 aa12.93□□□□□ -0.34
CXCL12-202ENST00000374426 HSP90AA5PQ58FG0 334 aa12.93□□□□□ -0.34
CXCL12-202ENST00000374426 LRRC8EQ6NSJ5 796 aa12.93□□□□□ -0.34
CXCL12-202ENST00000374426 CALML6Q8TD86 181 aa12.93□□□□□ -0.34
CXCL12-202ENST00000374426 NDNQ99608 321 aa12.93□□□□□ -0.34
CXCL12-202ENST00000374426 OLFM1Q99784 485 aa12.93□□□□□ -0.34
CXCL12-202ENST00000374426 VKORC1Q9BQB6 163 aa12.93□□□□□ -0.34
CXCL12-202ENST00000374426 SARGQ9BW04 601 aa12.93□□□□□ -0.34
CXCL12-202ENST00000374426 ENKD1Q9H0I2 346 aa12.93□□□□□ -0.34
CXCL12-202ENST00000374426 TRIM45Q9H8W5 580 aaPredicted RBP12.93□□□□□ -0.34
CXCL12-202ENST00000374426 LZTFL1Q9NQ48 299 aa12.93□□□□□ -0.34
CXCL12-202ENST00000374426 MAD1L1Q9Y6D9 718 aa12.93□□□□□ -0.34
CXCL12-202ENST00000374426 CDK2AP1O14519 115 aa12.92□□□□□ -0.34
CXCL12-202ENST00000374426 PRRG2O14669 202 aa12.92□□□□□ -0.34
CXCL12-202ENST00000374426 OR1F1O43749 312 aa12.92□□□□□ -0.34
CXCL12-202ENST00000374426 B4GALT2O60909 372 aa12.92□□□□□ -0.34
CXCL12-202ENST00000374426 TSPAN12O95859 305 aa12.92□□□□□ -0.34
CXCL12-202ENST00000374426 ALOX12P18054 663 aa12.92□□□□□ -0.34
CXCL12-202ENST00000374426 CAPN3P20807 821 aa12.92□□□□□ -0.34
CXCL12-202ENST00000374426 PTGER1P34995 402 aa12.92□□□□□ -0.34
CXCL12-202ENST00000374426 CYB561P49447 251 aa12.92□□□□□ -0.34
CXCL12-202ENST00000374426 RGS4P49798 205 aa12.92□□□□□ -0.34
CXCL12-202ENST00000374426 CCR8P51685 355 aa12.92□□□□□ -0.34
CXCL12-202ENST00000374426 MLF1P58340 268 aa12.92□□□□□ -0.34
CXCL12-202ENST00000374426 DHX9Q08211 1270 aaKnown RBP12.92□□□□□ -0.34
CXCL12-202ENST00000374426 PWP1Q13610 501 aa12.92□□□□□ -0.34
CXCL12-202ENST00000374426 PAQR3Q6TCH7 311 aa12.92□□□□□ -0.34
CXCL12-202ENST00000374426 OR4K1Q8NGD4 311 aa12.92□□□□□ -0.34
CXCL12-202ENST00000374426 PYCR2Q96C36 320 aa12.92□□□□□ -0.34
CXCL12-202ENST00000374426 SIGLEC10Q96LC7 697 aa12.92□□□□□ -0.34
CXCL12-202ENST00000374426 OR4K3Q96R72 315 aa12.92□□□□□ -0.34
CXCL12-202ENST00000374426 TREX2Q9BQ50 279 aaPredicted RBP12.92□□□□□ -0.34
CXCL12-202ENST00000374426 HAUS8Q9BT25 410 aa12.92□□□□□ -0.34
CXCL12-202ENST00000374426 FAM167BQ9BTA0 163 aa12.92□□□□□ -0.34
CXCL12-202ENST00000374426 IARS2Q9NSE4 1012 aaKnown RBP12.92□□□□□ -0.34
CXCL12-202ENST00000374426 PPT2Q9UMR5 302 aa12.92□□□□□ -0.34
CXCL12-202ENST00000374426 TRBC2A0A5B9 178 aa12.91□□□□□ -0.34
CXCL12-202ENST00000374426 SLC16A5O15375 505 aa12.91□□□□□ -0.34
CXCL12-202ENST00000374426 ZNF888P0CJ79 500 aaPredicted RBP12.91□□□□□ -0.34
CXCL12-202ENST00000374426 MAOAP21397 527 aa12.91□□□□□ -0.34
CXCL12-202ENST00000374426 JAK1P23458 1154 aa12.91□□□□□ -0.34
CXCL12-202ENST00000374426 GABRB3P28472 473 aa12.91□□□□□ -0.34
CXCL12-202ENST00000374426 TRHRP34981 398 aaPredicted RBP12.91□□□□□ -0.34
CXCL12-202ENST00000374426 ITGA8P53708 1063 aa12.91□□□□□ -0.34
CXCL12-202ENST00000374426 CDKN2DP55273 166 aa12.91□□□□□ -0.34
CXCL12-202ENST00000374426 BTG2P78543 158 aa12.91□□□□□ -0.34
CXCL12-202ENST00000374426 TLE4Q04727 773 aa12.91□□□□□ -0.34
CXCL12-202ENST00000374426 UGT3A1Q6NUS8 523 aa12.91□□□□□ -0.34
CXCL12-202ENST00000374426 ZNF662Q6ZS27 426 aa12.91□□□□□ -0.34
CXCL12-202ENST00000374426 STRA8Q7Z7C7 330 aa12.91□□□□□ -0.34
CXCL12-202ENST00000374426 CDH24Q86UP0 819 aa12.91□□□□□ -0.34
CXCL12-202ENST00000374426 PALM2Q8IXS6 379 aa12.91□□□□□ -0.34
CXCL12-202ENST00000374426 CYP4X1Q8N118 509 aa12.91□□□□□ -0.34
CXCL12-202ENST00000374426 MYO1HQ8N1T3 1032 aa12.91□□□□□ -0.34
CXCL12-202ENST00000374426 ARMC10Q8N2F6 343 aa12.91□□□□□ -0.34
CXCL12-202ENST00000374426 SERBP1Q8NC51 408 aaKnown RBP eCLIP12.91□□□□□ -0.34
CXCL12-202ENST00000374426 C2CD4AQ8NCU7 369 aaPredicted RBP12.91□□□□□ -0.34
CXCL12-202ENST00000374426 NFAM1Q8NET5 270 aaPredicted RBP12.91□□□□□ -0.34
CXCL12-202ENST00000374426 OR56A3Q8NH54 315 aa12.91□□□□□ -0.34
CXCL12-202ENST00000374426 CA5BP1Q8WTZ4 195 aa12.91□□□□□ -0.34
CXCL12-202ENST00000374426 CHTF18Q8WVB6 975 aa12.91□□□□□ -0.34
CXCL12-202ENST00000374426 SDCCAG3Q96C92 435 aa12.91□□□□□ -0.34
CXCL12-202ENST00000374426 LINGO1Q96FE5 620 aa12.91□□□□□ -0.34
CXCL12-202ENST00000374426 SNF8Q96H20 258 aa12.91□□□□□ -0.34
CXCL12-202ENST00000374426 PTCHD1Q96NR3 888 aa12.91□□□□□ -0.34
CXCL12-202ENST00000374426 SPNS1Q9H2V7 528 aa12.91□□□□□ -0.34
CXCL12-202ENST00000374426 MCCC2Q9HCC0 563 aa12.91□□□□□ -0.34
CXCL12-202ENST00000374426 TAS2R13Q9NYV9 303 aa12.91□□□□□ -0.34
CXCL12-202ENST00000374426 NEU2Q9Y3R4 380 aa12.91□□□□□ -0.34
CXCL12-202ENST00000374426 INTS1Q8N201 2190 aaKnown RBP12.91□□□□□ -0.34
CXCL12-202ENST00000374426 NIPBLQ6KC79 2804 aaeCLIP12.9□□□□□ -0.34
CXCL12-202ENST00000374426 IGKV3D-11A0A0A0MRZ8 115 aa12.9□□□□□ -0.34
CXCL12-202ENST00000374426 TCRBV16S1A1N1A0A5B0 115 aa12.9□□□□□ -0.34
CXCL12-202ENST00000374426 CTAGE15A4D2H0 777 aa12.9□□□□□ -0.34
CXCL12-202ENST00000374426 SAGE2PA6NJ88 616 aa12.9□□□□□ -0.34
CXCL12-202ENST00000374426 PRMT3O60678 531 aa12.9□□□□□ -0.34
CXCL12-202ENST00000374426 SERPIND1P05546 499 aa12.9□□□□□ -0.34
CXCL12-202ENST00000374426 HLCSP50747 726 aa12.9□□□□□ -0.34
CXCL12-202ENST00000374426 CATSPEREQ5SY80 951 aa12.9□□□□□ -0.34
CXCL12-202ENST00000374426 RBM20Q5T481 1227 aaKnown RBP12.9□□□□□ -0.34
CXCL12-202ENST00000374426 DUPD1Q68J44 220 aa12.9□□□□□ -0.34
CXCL12-202ENST00000374426 SPNS3Q6ZMD2 512 aa12.9□□□□□ -0.34
CXCL12-202ENST00000374426 MEX3BQ6ZN04 569 aaKnown RBP12.9□□□□□ -0.34
CXCL12-202ENST00000374426 QSOX2Q6ZRP7 698 aa12.9□□□□□ -0.34
CXCL12-202ENST00000374426 CTAGE6Q86UF2 777 aa12.9□□□□□ -0.34
CXCL12-202ENST00000374426 NAT8LQ8N9F0 302 aa12.9□□□□□ -0.34
CXCL12-202ENST00000374426 TRIM58Q8NG06 486 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms