RNA–Protein interactions for RNA: ENST00000373560.6

HDAC8-204, Transcript of histone deacetylase 8, humanhuman

TSL 3 BASIC

Gene HDAC8, Length 819 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-204ENST00000373560 PDK1Q15118 436 aa11.32□□□□□ -0.6
HDAC8-204ENST00000373560 HIST2H2BDQ6DRA6 164 aa11.32□□□□□ -0.6
HDAC8-204ENST00000373560 ZNF425Q6IV72 752 aa11.32□□□□□ -0.6
HDAC8-204ENST00000373560 SUSD1Q6UWL2 747 aa11.32□□□□□ -0.6
HDAC8-204ENST00000373560 SLC22A16Q86VW1 577 aa11.32□□□□□ -0.6
HDAC8-204ENST00000373560 ZCCHC10Q8TBK6 192 aa11.32□□□□□ -0.6
HDAC8-204ENST00000373560 SARAFQ96BY9 339 aa11.32□□□□□ -0.6
HDAC8-204ENST00000373560 PIK3IP1Q96FE7 263 aa11.32□□□□□ -0.6
HDAC8-204ENST00000373560 FSD1LQ9BXM9 530 aa11.32□□□□□ -0.6
HDAC8-204ENST00000373560 REG4Q9BYZ8 158 aa11.32□□□□□ -0.6
HDAC8-204ENST00000373560 ADAM19Q9H013 955 aa11.32□□□□□ -0.6
HDAC8-204ENST00000373560 SLC6A15Q9H2J7 730 aa11.32□□□□□ -0.6
HDAC8-204ENST00000373560 KLHL8Q9P2G9 620 aaPredicted RBP11.32□□□□□ -0.6
HDAC8-204ENST00000373560 EIF3LQ9Y262 564 aaKnown RBP11.32□□□□□ -0.6
HDAC8-204ENST00000373560 TESMINQ9Y4I5 508 aa11.32□□□□□ -0.6
HDAC8-204ENST00000373560 FREM3P0C091 2139 aa11.32□□□□□ -0.6
HDAC8-204ENST00000373560 TRBV11-1A0A0K0K1C0 115 aa11.31□□□□□ -0.6
HDAC8-204ENST00000373560 SLC35F4A4IF30 521 aa11.31□□□□□ -0.6
HDAC8-204ENST00000373560 C5orf60A6NFR6 353 aa11.31□□□□□ -0.6
HDAC8-204ENST00000373560 SAGE2PA6NJ88 616 aa11.31□□□□□ -0.6
HDAC8-204ENST00000373560 A8MUA0 341 aa11.31□□□□□ -0.6
HDAC8-204ENST00000373560 MAGEB17A8MXT2 336 aa11.31□□□□□ -0.6
HDAC8-204ENST00000373560 TMEM229AB2RXF0 380 aa11.31□□□□□ -0.6
HDAC8-204ENST00000373560 H0YIG0 161 aa11.31□□□□□ -0.6
HDAC8-204ENST00000373560 CDK2AP1O14519 115 aa11.31□□□□□ -0.6
HDAC8-204ENST00000373560 PPP1R12AO14974 1030 aaPredicted RBP11.31□□□□□ -0.6
HDAC8-204ENST00000373560 VPS26AO75436 327 aa11.31□□□□□ -0.6
HDAC8-204ENST00000373560 OR6B1O95007 311 aa11.31□□□□□ -0.6
HDAC8-204ENST00000373560 NSA2O95478 260 aaKnown RBP11.31□□□□□ -0.6
HDAC8-204ENST00000373560 GZMAP12544 262 aa11.31□□□□□ -0.6
HDAC8-204ENST00000373560 GABRA1P14867 456 aa11.31□□□□□ -0.6
HDAC8-204ENST00000373560 PECAM1P16284 738 aaPredicted RBP11.31□□□□□ -0.6
HDAC8-204ENST00000373560 FPR1P21462 350 aa11.31□□□□□ -0.6
HDAC8-204ENST00000373560 ADRA1AP35348 466 aa11.31□□□□□ -0.6
HDAC8-204ENST00000373560 HYAL2Q12891 473 aa11.31□□□□□ -0.6
HDAC8-204ENST00000373560 MPP3Q13368 585 aa11.31□□□□□ -0.6
HDAC8-204ENST00000373560 HADHQ16836 314 aaKnown RBP11.31□□□□□ -0.6
HDAC8-204ENST00000373560 GPR33Q49SQ1 333 aa11.31□□□□□ -0.6
HDAC8-204ENST00000373560 FKBP15Q5T1M5 1219 aa11.31□□□□□ -0.6
HDAC8-204ENST00000373560 CDKAL1Q5VV42 579 aa11.31□□□□□ -0.6
HDAC8-204ENST00000373560 PPP1R2P3Q6NXS1 205 aa11.31□□□□□ -0.6
HDAC8-204ENST00000373560 VN1R4Q7Z5H5 301 aa11.31□□□□□ -0.6
HDAC8-204ENST00000373560 TMEM156Q8N614 296 aa11.31□□□□□ -0.6
HDAC8-204ENST00000373560 APCDD1LQ8NCL9 501 aa11.31□□□□□ -0.6
HDAC8-204ENST00000373560 PLPP5Q8NEB5 264 aa11.31□□□□□ -0.6
HDAC8-204ENST00000373560 DEFB126Q9BYW3 111 aa11.31□□□□□ -0.6
HDAC8-204ENST00000373560 ISCUQ9H1K1 167 aa11.31□□□□□ -0.6
HDAC8-204ENST00000373560 LDAHQ9H6V9 325 aa11.31□□□□□ -0.6
HDAC8-204ENST00000373560 LRTM1Q9HBL6 345 aa11.31□□□□□ -0.6
HDAC8-204ENST00000373560 TIMMDC1Q9NPL8 285 aa11.31□□□□□ -0.6
HDAC8-204ENST00000373560 ZNF629Q9UEG4 869 aaPredicted RBP11.31□□□□□ -0.6
HDAC8-204ENST00000373560 CDC42EP3Q9UKI2 254 aa11.31□□□□□ -0.6
HDAC8-204ENST00000373560 PCDHA3Q9Y5H8 950 aa11.31□□□□□ -0.6
HDAC8-204ENST00000373560 TRGV5A0A0B4J1U4 118 aa11.3□□□□□ -0.6
HDAC8-204ENST00000373560 LRRC53A6NM62 1247 aa11.3□□□□□ -0.6
HDAC8-204ENST00000373560 APOL1O14791 398 aa11.3□□□□□ -0.6
HDAC8-204ENST00000373560 GPRIN2O60269 458 aa11.3□□□□□ -0.6
HDAC8-204ENST00000373560 SUSD5O60279 629 aa11.3□□□□□ -0.6
HDAC8-204ENST00000373560 GPC4O75487 556 aa11.3□□□□□ -0.6
HDAC8-204ENST00000373560 MYBL1P10243 752 aa11.3□□□□□ -0.6
HDAC8-204ENST00000373560 CMPK1P30085 196 aa11.3□□□□□ -0.6
HDAC8-204ENST00000373560 BCL6P41182 706 aa11.3□□□□□ -0.6
HDAC8-204ENST00000373560 TNNT3P45378 269 aaPredicted RBP11.3□□□□□ -0.6
HDAC8-204ENST00000373560 ATP5J2P56134 94 aa11.3□□□□□ -0.6
HDAC8-204ENST00000373560 CLEC12BQ2HXU8 276 aa11.3□□□□□ -0.6
HDAC8-204ENST00000373560 ZNF750Q32MQ0 723 aa11.3□□□□□ -0.6
HDAC8-204ENST00000373560 XKR6Q5GH73 641 aa11.3□□□□□ -0.6
HDAC8-204ENST00000373560 WIPI1Q5MNZ9 446 aaPredicted RBP11.3□□□□□ -0.6
HDAC8-204ENST00000373560 C6orf52Q5T4I8 152 aa11.3□□□□□ -0.6
HDAC8-204ENST00000373560 PLXDC2Q6UX71 529 aa11.3□□□□□ -0.6
HDAC8-204ENST00000373560 IL20RBQ6UXL0 311 aa11.3□□□□□ -0.6
HDAC8-204ENST00000373560 PACS1Q6VY07 963 aa11.3□□□□□ -0.6
HDAC8-204ENST00000373560 MAATS1Q7Z4T9 603 aa11.3□□□□□ -0.6
HDAC8-204ENST00000373560 LUZP2Q86TE4 346 aa11.3□□□□□ -0.6
HDAC8-204ENST00000373560 HMGCLL1Q8TB92 370 aa11.3□□□□□ -0.6
HDAC8-204ENST00000373560 ZBED6CLQ96FA7 236 aaPredicted RBP11.3□□□□□ -0.6
HDAC8-204ENST00000373560 LCORQ96JN0 433 aaPredicted RBP11.3□□□□□ -0.6
HDAC8-204ENST00000373560 RBM24Q9BX46 236 aaKnown RBP11.3□□□□□ -0.6
HDAC8-204ENST00000373560 EXO5Q9H790 373 aa11.3□□□□□ -0.6
HDAC8-204ENST00000373560 C10orf88Q9H8K7 445 aa11.3□□□□□ -0.6
HDAC8-204ENST00000373560 ZNF701Q9NV72 531 aaPredicted RBP11.3□□□□□ -0.6
HDAC8-204ENST00000373560 TUBA8Q9NY65 449 aaPredicted RBP11.3□□□□□ -0.6
HDAC8-204ENST00000373560 YLPM1P49750 1951 aaKnown RBP11.29□□□□□ -0.6
HDAC8-204ENST00000373560 LRRD1A4D1F6 860 aa11.29□□□□□ -0.6
HDAC8-204ENST00000373560 C1orf105O95561 183 aa11.29□□□□□ -0.6
HDAC8-204ENST00000373560 EPPINO95925 133 aa11.29□□□□□ -0.6
HDAC8-204ENST00000373560 B3GALT4O96024 378 aa11.29□□□□□ -0.6
HDAC8-204ENST00000373560 RFPL3SP0C7P2 107 aa11.29□□□□□ -0.6
HDAC8-204ENST00000373560 SKILP12757 684 aa11.29□□□□□ -0.6
HDAC8-204ENST00000373560 PAX1P15863 534 aa11.29□□□□□ -0.6
HDAC8-204ENST00000373560 SOX18P35713 384 aa11.29□□□□□ -0.6
HDAC8-204ENST00000373560 SOX3P41225 446 aa11.29□□□□□ -0.6
HDAC8-204ENST00000373560 OLR1P78380 273 aa11.29□□□□□ -0.6
HDAC8-204ENST00000373560 BTG2P78543 158 aa11.29□□□□□ -0.6
HDAC8-204ENST00000373560 DENND5AQ6IQ26 1287 aa11.29□□□□□ -0.6
HDAC8-204ENST00000373560 RANBP10Q6VN20 620 aa11.29□□□□□ -0.6
HDAC8-204ENST00000373560 C20orf204Q6ZNR8 217 aa11.29□□□□□ -0.6
HDAC8-204ENST00000373560 RGS9BPQ6ZS82 235 aa11.29□□□□□ -0.6
HDAC8-204ENST00000373560 IL17RELQ6ZVW7 336 aa11.29□□□□□ -0.6
HDAC8-204ENST00000373560 PCGF5Q86SE9 256 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms