RNA–Protein interactions for RNA: ENST00000372755.7

VCL-202, Transcript of vinculin, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VCL, Length 6,489 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-202ENST00000372755 TMED4Q7Z7H5 227 aa11.17□□□□□ -0.62
VCL-202ENST00000372755 CMASQ8NFW8 434 aaPredicted RBP11.17□□□□□ -0.62
VCL-202ENST00000372755 GALPQ9UBC7 116 aa11.17□□□□□ -0.62
VCL-202ENST00000372755 DLX3O60479 287 aa11.17□□□□□ -0.62
VCL-202ENST00000372755 MMP20O60882 483 aa11.17□□□□□ -0.62
VCL-202ENST00000372755 EMX2Q04743 252 aa11.17□□□□□ -0.62
VCL-202ENST00000372755 TUBB3Q13509 450 aa11.17□□□□□ -0.62
VCL-202ENST00000372755 MEDAGQ5VYS4 303 aa11.17□□□□□ -0.62
VCL-202ENST00000372755 KLHDC10Q6PID8 442 aa11.17□□□□□ -0.62
VCL-202ENST00000372755 AGTRAPQ6RW13 159 aa11.17□□□□□ -0.62
VCL-202ENST00000372755 ZER1Q7Z7L7 766 aa11.17□□□□□ -0.62
VCL-202ENST00000372755 OR9A1PQ8NGU1 263 aa11.17□□□□□ -0.62
VCL-202ENST00000372755 TMEM41AQ96HV5 264 aa11.17□□□□□ -0.62
VCL-202ENST00000372755 SCLYQ96I15 445 aa11.17□□□□□ -0.62
VCL-202ENST00000372755 GTPBP2Q9BX10 602 aaKnown RBP11.17□□□□□ -0.62
VCL-202ENST00000372755 TMEM165Q9HC07 324 aa11.17□□□□□ -0.62
VCL-202ENST00000372755 ZNF358Q9NW07 568 aa11.17□□□□□ -0.62
VCL-202ENST00000372755 Q9Y3F1 56 aa11.17□□□□□ -0.62
VCL-202ENST00000372755 PREX1Q8TCU6 1659 aa11.17□□□□□ -0.62
VCL-202ENST00000372755 PLIN4Q96Q06 1357 aa11.17□□□□□ -0.62
VCL-202ENST00000372755 C2orf92A0A1B0GVN3 265 aa11.17□□□□□ -0.62
VCL-202ENST00000372755 A0A1B0GVT2 93 aa11.17□□□□□ -0.62
VCL-202ENST00000372755 KLF11O14901 512 aa11.17□□□□□ -0.62
VCL-202ENST00000372755 CA12O43570 354 aa11.17□□□□□ -0.62
VCL-202ENST00000372755 VEGFDO43915 354 aa11.17□□□□□ -0.62
VCL-202ENST00000372755 FARS2O95363 451 aaKnown RBP11.17□□□□□ -0.62
VCL-202ENST00000372755 SYNGR4O95473 234 aa11.17□□□□□ -0.62
VCL-202ENST00000372755 IFI30P13284 250 aa11.17□□□□□ -0.62
VCL-202ENST00000372755 FUT4P22083 530 aa11.17□□□□□ -0.62
VCL-202ENST00000372755 MAN2A2P49641 1150 aa11.17□□□□□ -0.62
VCL-202ENST00000372755 PSMA6P60900 246 aaKnown RBP11.17□□□□□ -0.62
VCL-202ENST00000372755 PLP2Q04941 152 aa11.17□□□□□ -0.62
VCL-202ENST00000372755 MRPL49Q13405 166 aaKnown RBP11.17□□□□□ -0.62
VCL-202ENST00000372755 ABRAXAS2Q15018 415 aa11.17□□□□□ -0.62
VCL-202ENST00000372755 PLEKHN1Q494U1 663 aaPredicted RBP11.17□□□□□ -0.62
VCL-202ENST00000372755 ZC3HC1Q86WB0 502 aaKnown RBP11.17□□□□□ -0.62
VCL-202ENST00000372755 OR5T2Q8NGG2 359 aa11.17□□□□□ -0.62
VCL-202ENST00000372755 CREB3L1Q96BA8 519 aa11.17□□□□□ -0.62
VCL-202ENST00000372755 BARD1Q99728 777 aaKnown RBP11.17□□□□□ -0.62
VCL-202ENST00000372755 TAS2R10Q9NYW0 307 aa11.17□□□□□ -0.62
VCL-202ENST00000372755 A0A1W2PP18 115 aa11.17□□□□□ -0.62
VCL-202ENST00000372755 XRCC1P18887 633 aaPredicted RBP11.17□□□□□ -0.62
VCL-202ENST00000372755 UFM1P61960 85 aa11.17□□□□□ -0.62
VCL-202ENST00000372755 RPS13P62277 151 aaKnown RBP11.17□□□□□ -0.62
VCL-202ENST00000372755 ZNF33AQ06730 810 aa11.17□□□□□ -0.62
VCL-202ENST00000372755 HYAL2Q12891 473 aa11.17□□□□□ -0.62
VCL-202ENST00000372755 ARSKQ6UWY0 536 aa11.17□□□□□ -0.62
VCL-202ENST00000372755 ZNF550Q7Z398 422 aa11.17□□□□□ -0.62
VCL-202ENST00000372755 GID4Q8IVV7 300 aa11.17□□□□□ -0.62
VCL-202ENST00000372755 BBS10Q8TAM1 723 aa11.17□□□□□ -0.62
VCL-202ENST00000372755 FANK1Q8TC84 345 aa11.17□□□□□ -0.62
VCL-202ENST00000372755 BPIFB1Q8TDL5 484 aa11.17□□□□□ -0.62
VCL-202ENST00000372755 ZNF431Q8TF32 576 aaPredicted RBP11.17□□□□□ -0.62
VCL-202ENST00000372755 SH2B3Q9UQQ2 575 aa11.17□□□□□ -0.62
VCL-202ENST00000372755 FARSAQ9Y285 508 aaKnown RBP11.17□□□□□ -0.62
VCL-202ENST00000372755 RNF13O43567 381 aa11.17□□□□□ -0.62
VCL-202ENST00000372755 CH25HO95992 272 aa11.17□□□□□ -0.62
VCL-202ENST00000372755 ERP29P30040 261 aaKnown RBP11.17□□□□□ -0.62
VCL-202ENST00000372755 UGT2B10P36537 528 aa11.17□□□□□ -0.62
VCL-202ENST00000372755 CD83Q01151 205 aa11.17□□□□□ -0.62
VCL-202ENST00000372755 ANKDD1AQ495B1 522 aa11.17□□□□□ -0.62
VCL-202ENST00000372755 C10orf62Q5T681 223 aaPredicted RBP11.17□□□□□ -0.62
VCL-202ENST00000372755 GLT8D1Q68CQ7 371 aa11.17□□□□□ -0.62
VCL-202ENST00000372755 C22orf39Q6P5X5 142 aa11.17□□□□□ -0.62
VCL-202ENST00000372755 EPGNQ6UW88 154 aa11.17□□□□□ -0.62
VCL-202ENST00000372755 ZDHHC24Q6UX98 284 aa11.17□□□□□ -0.62
VCL-202ENST00000372755 BEND4Q6ZU67 534 aa11.17□□□□□ -0.62
VCL-202ENST00000372755 ZNF280BQ86YH2 543 aa11.17□□□□□ -0.62
VCL-202ENST00000372755 LRCH3Q96II8 777 aa11.17□□□□□ -0.62
VCL-202ENST00000372755 OR52B2Q96RD2 323 aa11.17□□□□□ -0.62
VCL-202ENST00000372755 C1orf21Q9H246 121 aa11.17□□□□□ -0.62
VCL-202ENST00000372755 SLC17A6Q9P2U8 582 aa11.17□□□□□ -0.62
VCL-202ENST00000372755 ZDHHC2Q9UIJ5 367 aa11.17□□□□□ -0.62
VCL-202ENST00000372755 HCN4Q9Y3Q4 1203 aa11.17□□□□□ -0.62
VCL-202ENST00000372755 PCDHGA2Q9Y5H1 932 aa11.17□□□□□ -0.62
VCL-202ENST00000372755 CFAP20Q9Y6A4 193 aaKnown RBP11.17□□□□□ -0.62
VCL-202ENST00000372755 PRSS51A0A1B0GVH4 220 aa11.16□□□□□ -0.62
VCL-202ENST00000372755 A8MU76 341 aa11.16□□□□□ -0.62
VCL-202ENST00000372755 J3KR12 359 aa11.16□□□□□ -0.62
VCL-202ENST00000372755 PDLIM1O00151 329 aa11.16□□□□□ -0.62
VCL-202ENST00000372755 HEXBP07686 556 aa11.16□□□□□ -0.62
VCL-202ENST00000372755 NRIP1P48552 1158 aa11.16□□□□□ -0.62
VCL-202ENST00000372755 ATP4BP51164 291 aa11.16□□□□□ -0.62
VCL-202ENST00000372755 KIAA1614Q5VZ46 1190 aa11.16□□□□□ -0.62
VCL-202ENST00000372755 PPP1R3FQ6ZSY5 799 aaPredicted RBP11.16□□□□□ -0.62
VCL-202ENST00000372755 C12orf42Q96LP6 360 aa11.16□□□□□ -0.62
VCL-202ENST00000372755 POPDC3Q9HBV1 291 aa11.16□□□□□ -0.62
VCL-202ENST00000372755 HHATLQ9HCP6 504 aa11.16□□□□□ -0.62
VCL-202ENST00000372755 LRRN3E7EW58 273 aa11.16□□□□□ -0.62
VCL-202ENST00000372755 ACVRL1P37023 503 aa11.16□□□□□ -0.62
VCL-202ENST00000372755 TRAM1Q15629 374 aa11.16□□□□□ -0.62
VCL-202ENST00000372755 VMACQ2NL98 169 aa11.16□□□□□ -0.62
VCL-202ENST00000372755 ASTE1Q2TB18 679 aaPredicted RBP11.16□□□□□ -0.62
VCL-202ENST00000372755 KCTD9Q7L273 389 aa11.16□□□□□ -0.62
VCL-202ENST00000372755 ARMCX6Q7L4S7 300 aa11.16□□□□□ -0.62
VCL-202ENST00000372755 ERMP1Q7Z2K6 904 aa11.16□□□□□ -0.62
VCL-202ENST00000372755 IFNL1Q8IU54 200 aa11.16□□□□□ -0.62
VCL-202ENST00000372755 BIRC7Q96CA5 298 aa11.16□□□□□ -0.62
VCL-202ENST00000372755 GPR22Q99680 433 aa11.16□□□□□ -0.62
VCL-202ENST00000372755 SLC30A2Q9BRI3 323 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms