RNA–Protein interactions for RNA: ENST00000372235.7

TMEM53-201, Transcript of transmembrane protein 53, humanhuman

TSL 2 BASIC

Gene TMEM53, Length 890 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-201ENST00000372235 LGI4Q8N135 537 aa17.8■□□□□ 0.44
TMEM53-201ENST00000372235 FAR2Q96K12 515 aa17.8■□□□□ 0.44
TMEM53-201ENST00000372235 TSNARE1Q96NA8 513 aa17.8■□□□□ 0.44
TMEM53-201ENST00000372235 SLX1AQ9BQ83 275 aa17.8■□□□□ 0.44
TMEM53-201ENST00000372235 MESP1Q9BRJ9 268 aa17.8■□□□□ 0.44
TMEM53-201ENST00000372235 SLC6A16Q9GZN6 736 aa17.8■□□□□ 0.44
TMEM53-201ENST00000372235 DPH5Q9H2P9 285 aa17.8■□□□□ 0.44
TMEM53-201ENST00000372235 KCNK13Q9HB14 408 aa17.8■□□□□ 0.44
TMEM53-201ENST00000372235 NTNG1Q9Y2I2 539 aa17.8■□□□□ 0.44
TMEM53-201ENST00000372235 A0A1B0GUH1 482 aa17.79■□□□□ 0.44
TMEM53-201ENST00000372235 PRAMEF2O60811 474 aa17.79■□□□□ 0.44
TMEM53-201ENST00000372235 WDR47O94967 919 aa17.79■□□□□ 0.44
TMEM53-201ENST00000372235 S100BP04271 92 aaPredicted RBP17.79■□□□□ 0.44
TMEM53-201ENST00000372235 C1GALT1C1LP0DN25 315 aa17.79■□□□□ 0.44
TMEM53-201ENST00000372235 RNH1P13489 461 aaKnown RBP17.79■□□□□ 0.44
TMEM53-201ENST00000372235 STX2P32856 288 aa17.79■□□□□ 0.44
TMEM53-201ENST00000372235 OR4D2P58180 307 aa17.79■□□□□ 0.44
TMEM53-201ENST00000372235 ETF1P62495 437 aaKnown RBP17.79■□□□□ 0.44
TMEM53-201ENST00000372235 RHAGQ02094 409 aa17.79■□□□□ 0.44
TMEM53-201ENST00000372235 NAB1Q13506 487 aa17.79■□□□□ 0.44
TMEM53-201ENST00000372235 TGFBIQ15582 683 aa17.79■□□□□ 0.44
TMEM53-201ENST00000372235 TSNQ15631 228 aaKnown RBP17.79■□□□□ 0.44
TMEM53-201ENST00000372235 ZNF800Q2TB10 664 aaPredicted RBP eCLIP17.79■□□□□ 0.44
TMEM53-201ENST00000372235 GRTP1Q5TC63 336 aa17.79■□□□□ 0.44
TMEM53-201ENST00000372235 SULT1C3Q6IMI6 304 aa17.79■□□□□ 0.44
TMEM53-201ENST00000372235 PAPD4Q6PIY7 484 aaKnown RBP17.79■□□□□ 0.44
TMEM53-201ENST00000372235 QSOX2Q6ZRP7 698 aa17.79■□□□□ 0.44
TMEM53-201ENST00000372235 LANCL3Q6ZV70 420 aa17.79■□□□□ 0.44
TMEM53-201ENST00000372235 ADAMTS18Q8TE60 1221 aa17.79■□□□□ 0.44
TMEM53-201ENST00000372235 UTP15Q8TED0 518 aaKnown RBP17.79■□□□□ 0.44
TMEM53-201ENST00000372235 RHBDF1Q96CC6 855 aa17.79■□□□□ 0.44
TMEM53-201ENST00000372235 GPR22Q99680 433 aa17.79■□□□□ 0.44
TMEM53-201ENST00000372235 RBBP8Q99708 897 aa17.79■□□□□ 0.44
TMEM53-201ENST00000372235 EHD1Q9H4M9 534 aa17.79■□□□□ 0.44
TMEM53-201ENST00000372235 NT5DC2Q9H857 520 aa17.79■□□□□ 0.44
TMEM53-201ENST00000372235 TCRBV9S1A1TA0A576 114 aa17.78■□□□□ 0.44
TMEM53-201ENST00000372235 A8MUI8 341 aa17.78■□□□□ 0.44
TMEM53-201ENST00000372235 CLGNO14967 610 aa17.78■□□□□ 0.44
TMEM53-201ENST00000372235 RAD51CO43502 376 aa17.78■□□□□ 0.44
TMEM53-201ENST00000372235 CHST10O43529 356 aa17.78■□□□□ 0.44
TMEM53-201ENST00000372235 PRMT3O60678 531 aa17.78■□□□□ 0.44
TMEM53-201ENST00000372235 LDLRP01130 860 aa17.78■□□□□ 0.44
TMEM53-201ENST00000372235 ZNF888P0CJ79 500 aaPredicted RBP17.78■□□□□ 0.44
TMEM53-201ENST00000372235 SSTR1P30872 391 aa17.78■□□□□ 0.44
TMEM53-201ENST00000372235 GGT5P36269 586 aa17.78■□□□□ 0.44
TMEM53-201ENST00000372235 SLC6A12P48065 614 aa17.78■□□□□ 0.44
TMEM53-201ENST00000372235 RCN2Q14257 317 aa17.78■□□□□ 0.44
TMEM53-201ENST00000372235 SFT2D3Q587I9 215 aa17.78■□□□□ 0.44
TMEM53-201ENST00000372235 ACER2Q5QJU3 275 aa17.78■□□□□ 0.44
TMEM53-201ENST00000372235 TMIGD1Q6UXZ0 262 aa17.78■□□□□ 0.44
TMEM53-201ENST00000372235 CAPN12Q6ZSI9 719 aa17.78■□□□□ 0.44
TMEM53-201ENST00000372235 CCDC91Q7Z6B0 441 aa17.78■□□□□ 0.44
TMEM53-201ENST00000372235 GPSM1Q86YR5 675 aa17.78■□□□□ 0.44
TMEM53-201ENST00000372235 CEP97Q8IW35 865 aa17.78■□□□□ 0.44
TMEM53-201ENST00000372235 C7orf57Q8NEG2 295 aa17.78■□□□□ 0.44
TMEM53-201ENST00000372235 NR4A3Q92570 626 aa17.78■□□□□ 0.44
TMEM53-201ENST00000372235 NPLQ9BXD5 320 aaPredicted RBP17.78■□□□□ 0.44
TMEM53-201ENST00000372235 LANCL2Q9NS86 450 aa17.78■□□□□ 0.44
TMEM53-201ENST00000372235 PLA2G3Q9NZ20 509 aa17.78■□□□□ 0.44
TMEM53-201ENST00000372235 WWOXQ9NZC7 414 aa17.78■□□□□ 0.44
TMEM53-201ENST00000372235 COPG2Q9UBF2 871 aa17.78■□□□□ 0.44
TMEM53-201ENST00000372235 ERRFI1Q9UJM3 462 aaPredicted RBP17.78■□□□□ 0.44
TMEM53-201ENST00000372235 ANKDD1BA6NHY2 528 aa17.77■□□□□ 0.44
TMEM53-201ENST00000372235 FAM159BA6NKW6 160 aa17.77■□□□□ 0.44
TMEM53-201ENST00000372235 CDC123O75794 336 aaPredicted RBP17.77■□□□□ 0.44
TMEM53-201ENST00000372235 CCDC166P0CW27 439 aa17.77■□□□□ 0.44
TMEM53-201ENST00000372235 PGGT1BP53609 377 aa17.77■□□□□ 0.44
TMEM53-201ENST00000372235 RAB10P61026 200 aa17.77■□□□□ 0.44
TMEM53-201ENST00000372235 RBPJQ06330 500 aa17.77■□□□□ 0.44
TMEM53-201ENST00000372235 CKAP4Q07065 602 aaKnown RBP17.77■□□□□ 0.44
TMEM53-201ENST00000372235 TGM3Q08188 693 aa17.77■□□□□ 0.44
TMEM53-201ENST00000372235 LAPTM5Q13571 262 aa17.77■□□□□ 0.44
TMEM53-201ENST00000372235 ZNF460Q14592 562 aa17.77■□□□□ 0.44
TMEM53-201ENST00000372235 HIST2H2ACQ16777 129 aaPredicted RBP17.77■□□□□ 0.44
TMEM53-201ENST00000372235 PAGE2BQ5JRK9 111 aa17.77■□□□□ 0.44
TMEM53-201ENST00000372235 HIST2H2AA3Q6FI13 130 aa17.77■□□□□ 0.44
TMEM53-201ENST00000372235 CEP128Q6ZU80 1094 aa17.77■□□□□ 0.44
TMEM53-201ENST00000372235 MAMDC2Q7Z304 686 aaPredicted RBP17.77■□□□□ 0.44
TMEM53-201ENST00000372235 CTAGE3PQ8IX95 158 aa17.77■□□□□ 0.44
TMEM53-201ENST00000372235 ANKRD49Q8WVL7 239 aa17.77■□□□□ 0.44
TMEM53-201ENST00000372235 GAL3ST3Q96A11 431 aa17.77■□□□□ 0.44
TMEM53-201ENST00000372235 MOCOSQ96EN8 888 aa17.77■□□□□ 0.44
TMEM53-201ENST00000372235 PTCHD1Q96NR3 888 aa17.77■□□□□ 0.44
TMEM53-201ENST00000372235 UTP23Q9BRU9 249 aaKnown RBP17.77■□□□□ 0.44
TMEM53-201ENST00000372235 PRDM9Q9NQV7 894 aa17.77■□□□□ 0.44
TMEM53-201ENST00000372235 DNAJC11Q9NVH1 559 aa17.77■□□□□ 0.44
TMEM53-201ENST00000372235 IKZF3Q9UKT9 509 aa17.77■□□□□ 0.44
TMEM53-201ENST00000372235 MRPS33Q9Y291 106 aaKnown RBP17.77■□□□□ 0.44
TMEM53-201ENST00000372235 MTO1Q9Y2Z2 717 aaKnown RBP17.77■□□□□ 0.44
TMEM53-201ENST00000372235 MMACHCQ9Y4U1 282 aa17.77■□□□□ 0.44
TMEM53-201ENST00000372235 IGHV3-20A0A0C4DH32 117 aa17.76■□□□□ 0.43
TMEM53-201ENST00000372235 CCDC189A1A4V9 331 aa17.76■□□□□ 0.43
TMEM53-201ENST00000372235 ZNF860A6NHJ4 632 aa17.76■□□□□ 0.43
TMEM53-201ENST00000372235 E2F3O00716 465 aa17.76■□□□□ 0.43
TMEM53-201ENST00000372235 CLDN4O14493 209 aa17.76■□□□□ 0.43
TMEM53-201ENST00000372235 CLEC3AO75596 197 aa17.76■□□□□ 0.43
TMEM53-201ENST00000372235 STK16O75716 305 aa17.76■□□□□ 0.43
TMEM53-201ENST00000372235 CELA2AP08217 269 aa17.76■□□□□ 0.43
TMEM53-201ENST00000372235 SMIM10L1P0DMW3 83 aa17.76■□□□□ 0.43
TMEM53-201ENST00000372235 PLTPP55058 493 aa17.76■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 142.3 ms