RNA–Protein interactions for RNA: ENST00000368530.6

TPM3-210, Transcript of tropomyosin 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TPM3, Length 1,523 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-210ENST00000368530 TCAIMQ8N3R3 496 aa9.56□□□□□ -0.88
TPM3-210ENST00000368530 FAM26EQ8N5C1 309 aa9.56□□□□□ -0.88
TPM3-210ENST00000368530 ESX1Q8N693 406 aa9.56□□□□□ -0.88
TPM3-210ENST00000368530 RCN3Q96D15 328 aa9.56□□□□□ -0.88
TPM3-210ENST00000368530 RNF31Q96EP0 1072 aa9.56□□□□□ -0.88
TPM3-210ENST00000368530 HBEGFQ99075 208 aa9.56□□□□□ -0.88
TPM3-210ENST00000368530 LDHAL6BQ9BYZ2 381 aaPredicted RBP9.56□□□□□ -0.88
TPM3-210ENST00000368530 RASSF4Q9H2L5 321 aa9.56□□□□□ -0.88
TPM3-210ENST00000368530 EPB41L1Q9H4G0 881 aa9.56□□□□□ -0.88
TPM3-210ENST00000368530 KLC4Q9NSK0 619 aa9.56□□□□□ -0.88
TPM3-210ENST00000368530 RNF11Q9Y3C5 154 aa9.56□□□□□ -0.88
TPM3-210ENST00000368530 PSMD12O00232 456 aaPredicted RBP9.55□□□□□ -0.88
TPM3-210ENST00000368530 LIN7AO14910 233 aaPredicted RBP9.55□□□□□ -0.88
TPM3-210ENST00000368530 PSIP1O75475 530 aaKnown RBP9.55□□□□□ -0.88
TPM3-210ENST00000368530 MATN4O95460 622 aa9.55□□□□□ -0.88
TPM3-210ENST00000368530 CATP04040 527 aaKnown RBP9.55□□□□□ -0.88
TPM3-210ENST00000368530 PDGFAP04085 211 aa9.55□□□□□ -0.88
TPM3-210ENST00000368530 EPB42P16452 691 aa9.55□□□□□ -0.88
TPM3-210ENST00000368530 LBPP18428 481 aa9.55□□□□□ -0.88
TPM3-210ENST00000368530 ITGAXP20702 1163 aa9.55□□□□□ -0.88
TPM3-210ENST00000368530 CPOXP36551 454 aa9.55□□□□□ -0.88
TPM3-210ENST00000368530 MNAT1P51948 309 aa9.55□□□□□ -0.88
TPM3-210ENST00000368530 MLLT10P55197 1068 aa9.55□□□□□ -0.88
TPM3-210ENST00000368530 STX1BP61266 288 aa9.55□□□□□ -0.88
TPM3-210ENST00000368530 CDKL1Q00532 357 aa9.55□□□□□ -0.88
TPM3-210ENST00000368530 KLRB1Q12918 225 aa9.55□□□□□ -0.88
TPM3-210ENST00000368530 CYLC2Q14093 348 aaPredicted RBP9.55□□□□□ -0.88
TPM3-210ENST00000368530 FASTKQ14296 549 aaKnown RBP9.55□□□□□ -0.88
TPM3-210ENST00000368530 ZXDCQ2QGD7 858 aaPredicted RBP9.55□□□□□ -0.88
TPM3-210ENST00000368530 PTCHD3Q3KNS1 767 aa9.55□□□□□ -0.88
TPM3-210ENST00000368530 DNAL1Q4LDG9 190 aa9.55□□□□□ -0.88
TPM3-210ENST00000368530 ZNF658BQ4V348 819 aaPredicted RBP9.55□□□□□ -0.88
TPM3-210ENST00000368530 TMEM26Q6ZUK4 368 aa9.55□□□□□ -0.88
TPM3-210ENST00000368530 LRRC70Q7Z2Q7 622 aa9.55□□□□□ -0.88
TPM3-210ENST00000368530 PARP9Q8IXQ6 854 aa9.55□□□□□ -0.88
TPM3-210ENST00000368530 FAM13CQ8NE31 585 aa9.55□□□□□ -0.88
TPM3-210ENST00000368530 OR2T11Q8NH01 316 aa9.55□□□□□ -0.88
TPM3-210ENST00000368530 HMGCLL1Q8TB92 370 aa9.55□□□□□ -0.88
TPM3-210ENST00000368530 ZNF514Q96K75 400 aaPredicted RBP9.55□□□□□ -0.88
TPM3-210ENST00000368530 CLPTM1LQ96KA5 538 aa9.55□□□□□ -0.88
TPM3-210ENST00000368530 FOPNLQ96NB1 174 aa9.55□□□□□ -0.88
TPM3-210ENST00000368530 PKP4Q99569 1192 aa9.55□□□□□ -0.88
TPM3-210ENST00000368530 THTPAQ9BU02 230 aa9.55□□□□□ -0.88
TPM3-210ENST00000368530 ZNF768Q9H5H4 540 aaKnown RBP9.55□□□□□ -0.88
TPM3-210ENST00000368530 ACTR8Q9H981 624 aa9.55□□□□□ -0.88
TPM3-210ENST00000368530 BAIAP2L1Q9UHR4 511 aa9.55□□□□□ -0.88
TPM3-210ENST00000368530 CROTQ9UKG9 612 aa9.55□□□□□ -0.88
TPM3-210ENST00000368530 SEC23IPQ9Y6Y8 1000 aaKnown RBP9.55□□□□□ -0.88
TPM3-210ENST00000368530 NBPF19A0A087WUL8 3843 aa9.55□□□□□ -0.88
TPM3-210ENST00000368530 UNC79Q9P2D8 2635 aa9.54□□□□□ -0.88
TPM3-210ENST00000368530 SPTAN1Q13813 2472 aaKnown RBP9.54□□□□□ -0.88
TPM3-210ENST00000368530 C9JVG2 144 aa9.54□□□□□ -0.88
TPM3-210ENST00000368530 SLC22A2O15244 555 aa9.54□□□□□ -0.88
TPM3-210ENST00000368530 TOX3O15405 576 aaPredicted RBP9.54□□□□□ -0.88
TPM3-210ENST00000368530 KIF1CO43896 1103 aaKnown RBP9.54□□□□□ -0.88
TPM3-210ENST00000368530 VPS4BO75351 444 aa9.54□□□□□ -0.88
TPM3-210ENST00000368530 TIAF1O95411 115 aa9.54□□□□□ -0.88
TPM3-210ENST00000368530 RECKO95980 971 aa9.54□□□□□ -0.88
TPM3-210ENST00000368530 FGF5P12034 268 aa9.54□□□□□ -0.88
TPM3-210ENST00000368530 SLC2A4P14672 509 aa9.54□□□□□ -0.88
TPM3-210ENST00000368530 TYRP1P17643 537 aa9.54□□□□□ -0.88
TPM3-210ENST00000368530 EPORP19235 508 aa9.54□□□□□ -0.88
TPM3-210ENST00000368530 DLSTP36957 453 aa9.54□□□□□ -0.88
TPM3-210ENST00000368530 MAPK9P45984 424 aa9.54□□□□□ -0.88
TPM3-210ENST00000368530 SLC6A12P48065 614 aa9.54□□□□□ -0.88
TPM3-210ENST00000368530 HNMTP50135 292 aa9.54□□□□□ -0.88
TPM3-210ENST00000368530 NUDT2P50583 147 aa9.54□□□□□ -0.88
TPM3-210ENST00000368530 AP1S2P56377 157 aa9.54□□□□□ -0.88
TPM3-210ENST00000368530 CDC16Q13042 620 aa9.54□□□□□ -0.88
TPM3-210ENST00000368530 TSTA3Q13630 321 aaPredicted RBP9.54□□□□□ -0.88
TPM3-210ENST00000368530 ABRAXAS2Q15018 415 aa9.54□□□□□ -0.88
TPM3-210ENST00000368530 CDKL4Q5MAI5 379 aa9.54□□□□□ -0.88
TPM3-210ENST00000368530 PAOXQ6QHF9 649 aa9.54□□□□□ -0.88
TPM3-210ENST00000368530 ABRAXAS1Q6UWZ7 409 aa9.54□□□□□ -0.88
TPM3-210ENST00000368530 C6orf15Q6UXA7 325 aaPredicted RBP9.54□□□□□ -0.88
TPM3-210ENST00000368530 LRRTM4Q86VH4 590 aa9.54□□□□□ -0.88
TPM3-210ENST00000368530 LMNTD1Q8N9Z9 388 aa9.54□□□□□ -0.88
TPM3-210ENST00000368530 GALNT6Q8NCL4 622 aa9.54□□□□□ -0.88
TPM3-210ENST00000368530 PPFIBP2Q8ND30 876 aa9.54□□□□□ -0.88
TPM3-210ENST00000368530 OR9I1Q8NGQ6 314 aa9.54□□□□□ -0.88
TPM3-210ENST00000368530 OR2L2Q8NH16 312 aa9.54□□□□□ -0.88
TPM3-210ENST00000368530 RP9Q8TA86 221 aaKnown RBP9.54□□□□□ -0.88
TPM3-210ENST00000368530 HM13Q8TCT9 377 aa9.54□□□□□ -0.88
TPM3-210ENST00000368530 KLHL6Q8WZ60 621 aa9.54□□□□□ -0.88
TPM3-210ENST00000368530 FBXL8Q96CD0 374 aa9.54□□□□□ -0.88
TPM3-210ENST00000368530 MTFMTQ96DP5 389 aaKnown RBP9.54□□□□□ -0.88
TPM3-210ENST00000368530 OR6C1Q96RD1 312 aa9.54□□□□□ -0.88
TPM3-210ENST00000368530 C1orf50Q9BV19 199 aa9.54□□□□□ -0.88
TPM3-210ENST00000368530 REPIN1Q9BWE0 567 aaKnown RBP9.54□□□□□ -0.88
TPM3-210ENST00000368530 ULBP3Q9BZM4 244 aa9.54□□□□□ -0.88
TPM3-210ENST00000368530 AKIRIN1Q9H9L7 192 aaPredicted RBP9.54□□□□□ -0.88
TPM3-210ENST00000368530 FARSBQ9NSD9 589 aaKnown RBP9.54□□□□□ -0.88
TPM3-210ENST00000368530 DNAJC11Q9NVH1 559 aa9.54□□□□□ -0.88
TPM3-210ENST00000368530 RIC8BQ9NVN3 520 aa9.54□□□□□ -0.88
TPM3-210ENST00000368530 CCDC167Q9P0B6 97 aa9.54□□□□□ -0.88
TPM3-210ENST00000368530 SEMA5BQ9P283 1151 aa9.54□□□□□ -0.88
TPM3-210ENST00000368530 PSMD13Q9UNM6 376 aa9.54□□□□□ -0.88
TPM3-210ENST00000368530 SLC22A14Q9Y267 594 aa9.54□□□□□ -0.88
TPM3-210ENST00000368530 PCDHGA6Q9Y5G7 932 aa9.54□□□□□ -0.88
TPM3-210ENST00000368530 BLACEA4D250 179 aa9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms