RNA–Protein interactions for RNA: ENST00000368436.1

CKS1B-202, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 2 BASIC

Gene CKS1B, Length 820 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-202ENST00000368436 SKP1P63208 163 aa15.04■□□□□ -0
CKS1B-202ENST00000368436 PDAP1Q13442 181 aaKnown RBP15.04■□□□□ -0
CKS1B-202ENST00000368436 C3AR1Q16581 482 aa15.04■□□□□ -0
CKS1B-202ENST00000368436 DEFB134Q4QY38 66 aa15.04■□□□□ -0
CKS1B-202ENST00000368436 HECTD2Q5U5R9 776 aa15.04■□□□□ -0
CKS1B-202ENST00000368436 XKRXQ6PP77 449 aa15.04■□□□□ -0
CKS1B-202ENST00000368436 Q6ZPB1 254 aaPredicted RBP15.04■□□□□ -0
CKS1B-202ENST00000368436 TBC1D19Q8N5T2 526 aa15.04■□□□□ -0
CKS1B-202ENST00000368436 TMEM178AQ8NBL3 297 aa15.04■□□□□ -0
CKS1B-202ENST00000368436 UTP15Q8TED0 518 aaKnown RBP15.04■□□□□ -0
CKS1B-202ENST00000368436 SLC5A11Q8WWX8 675 aa15.04■□□□□ -0
CKS1B-202ENST00000368436 ATL1Q8WXF7 558 aa15.04■□□□□ -0
CKS1B-202ENST00000368436 SLCO2A1Q92959 643 aa15.04■□□□□ -0
CKS1B-202ENST00000368436 NEIL2Q969S2 332 aa15.04■□□□□ -0
CKS1B-202ENST00000368436 PDLIM5Q96HC4 596 aaKnown RBP15.04■□□□□ -0
CKS1B-202ENST00000368436 FRMD6Q96NE9 622 aa15.04■□□□□ -0
CKS1B-202ENST00000368436 SPNS1Q9H2V7 528 aa15.04■□□□□ -0
CKS1B-202ENST00000368436 CDCP1Q9H5V8 836 aa15.04■□□□□ -0
CKS1B-202ENST00000368436 CLK4Q9HAZ1 481 aaKnown RBP15.04■□□□□ -0
CKS1B-202ENST00000368436 CHST11Q9NPF2 352 aa15.04■□□□□ -0
CKS1B-202ENST00000368436 KLHL1Q9NR64 748 aa15.04■□□□□ -0
CKS1B-202ENST00000368436 SLC17A6Q9P2U8 582 aa15.04■□□□□ -0
CKS1B-202ENST00000368436 SH3BGRL2Q9UJC5 107 aa15.04■□□□□ -0
CKS1B-202ENST00000368436 ZFP69BQ9UJL9 534 aa15.04■□□□□ -0
CKS1B-202ENST00000368436 VWA7Q9Y334 891 aa15.04■□□□□ -0
CKS1B-202ENST00000368436 B3GALT4O96024 378 aa15.03■□□□□ -0
CKS1B-202ENST00000368436 SMIM10L1P0DMW3 83 aa15.03■□□□□ -0
CKS1B-202ENST00000368436 AGAP20933 346 aa15.03■□□□□ -0
CKS1B-202ENST00000368436 IVDP26440 423 aa15.03■□□□□ -0
CKS1B-202ENST00000368436 HTR1EP28566 365 aa15.03■□□□□ -0
CKS1B-202ENST00000368436 PTGER4P35408 488 aa15.03■□□□□ -0
CKS1B-202ENST00000368436 ST13P50502 369 aaKnown RBP15.03■□□□□ -0
CKS1B-202ENST00000368436 CASP6P55212 293 aa15.03■□□□□ -0
CKS1B-202ENST00000368436 TAS2R50P59544 299 aa15.03■□□□□ -0
CKS1B-202ENST00000368436 OLR1P78380 273 aa15.03■□□□□ -0
CKS1B-202ENST00000368436 ADORA2A-AS1P86434 159 aa15.03■□□□□ -0
CKS1B-202ENST00000368436 ALDH6A1Q02252 535 aaKnown RBP15.03■□□□□ -0
CKS1B-202ENST00000368436 RGS1Q08116 209 aa15.03■□□□□ -0
CKS1B-202ENST00000368436 CSHL1Q14406 222 aa15.03■□□□□ -0
CKS1B-202ENST00000368436 SLC25A25Q6KCM7 469 aa15.03■□□□□ -0
CKS1B-202ENST00000368436 FAM45BPQ6NSW5 357 aa15.03■□□□□ -0
CKS1B-202ENST00000368436 SBSNQ6UWP8 590 aa15.03■□□□□ -0
CKS1B-202ENST00000368436 RPS19BP1Q86WX3 136 aaKnown RBP15.03■□□□□ -0
CKS1B-202ENST00000368436 SPPL2CQ8IUH8 684 aa15.03■□□□□ -0
CKS1B-202ENST00000368436 SIAH3Q8IW03 269 aa15.03■□□□□ -0
CKS1B-202ENST00000368436 SLC35F6Q8N357 371 aa15.03■□□□□ -0
CKS1B-202ENST00000368436 HORMAD2Q8N7B1 307 aa15.03■□□□□ -0
CKS1B-202ENST00000368436 FAM45AQ8TCE6 357 aa15.03■□□□□ -0
CKS1B-202ENST00000368436 ADAMTS18Q8TE60 1221 aa15.03■□□□□ -0
CKS1B-202ENST00000368436 SMIM10Q96HG1 83 aa15.03■□□□□ -0
CKS1B-202ENST00000368436 OLFM1Q99784 485 aa15.03■□□□□ -0
CKS1B-202ENST00000368436 ASIC3Q9UHC3 531 aa15.03■□□□□ -0
CKS1B-202ENST00000368436 IKZF3Q9UKT9 509 aa15.03■□□□□ -0
CKS1B-202ENST00000368436 SNX12Q9UMY4 172 aa15.03■□□□□ -0
CKS1B-202ENST00000368436 PABPN1LA6NDY0 278 aaKnown RBP15.02■□□□□ -0
CKS1B-202ENST00000368436 FAM227AF5H4B4 570 aa15.02■□□□□ -0
CKS1B-202ENST00000368436 NDC80O14777 642 aa15.02■□□□□ -0
CKS1B-202ENST00000368436 B4GALT2O60909 372 aa15.02■□□□□ -0
CKS1B-202ENST00000368436 GUCA1CO95843 209 aa15.02■□□□□ -0
CKS1B-202ENST00000368436 SERPIND1P05546 499 aa15.02■□□□□ -0
CKS1B-202ENST00000368436 ZNF888P0CJ79 500 aaPredicted RBP15.02■□□□□ -0
CKS1B-202ENST00000368436 ELAVL4P26378 380 aaKnown RBP15.02■□□□□ -0
CKS1B-202ENST00000368436 BTG2P78543 158 aa15.02■□□□□ -0
CKS1B-202ENST00000368436 REEP5Q00765 189 aa15.02■□□□□ -0
CKS1B-202ENST00000368436 OC90Q02509 493 aaPredicted RBP15.02■□□□□ -0
CKS1B-202ENST00000368436 HYAL2Q12891 473 aa15.02■□□□□ -0
CKS1B-202ENST00000368436 BBS9Q3SYG4 887 aa15.02■□□□□ -0
CKS1B-202ENST00000368436 ZNF468Q5VIY5 522 aaPredicted RBP15.02■□□□□ -0
CKS1B-202ENST00000368436 QSOX2Q6ZRP7 698 aa15.02■□□□□ -0
CKS1B-202ENST00000368436 ABHD13Q7L211 337 aa15.02■□□□□ -0
CKS1B-202ENST00000368436 GALNTL5Q7Z4T8 443 aa15.02■□□□□ -0
CKS1B-202ENST00000368436 KIF2BQ8N4N8 673 aa15.02■□□□□ -0
CKS1B-202ENST00000368436 GPATCH11Q8N954 259 aa15.02■□□□□ -0
CKS1B-202ENST00000368436 NFAM1Q8NET5 270 aaPredicted RBP15.02■□□□□ -0
CKS1B-202ENST00000368436 PTCHD1Q96NR3 888 aa15.02■□□□□ -0
CKS1B-202ENST00000368436 SLC6A16Q9GZN6 736 aa15.02■□□□□ -0
CKS1B-202ENST00000368436 DDX47Q9H0S4 455 aaKnown RBP15.02■□□□□ -0
CKS1B-202ENST00000368436 TRIM45Q9H8W5 580 aaPredicted RBP15.02■□□□□ -0
CKS1B-202ENST00000368436 PELI2Q9HAT8 420 aa15.02■□□□□ -0
CKS1B-202ENST00000368436 LRFN1Q9P244 771 aa15.02■□□□□ -0
CKS1B-202ENST00000368436 TINAGQ9UJW2 476 aa15.02■□□□□ -0
CKS1B-202ENST00000368436 PDZD2O15018 2839 aa15.01□□□□□ -0.01
CKS1B-202ENST00000368436 TCRBV16S1A1N1A0A5B0 115 aa15.01□□□□□ -0.01
CKS1B-202ENST00000368436 CTAGE15A4D2H0 777 aa15.01□□□□□ -0.01
CKS1B-202ENST00000368436 NPIPA5E9PKD4 350 aa15.01□□□□□ -0.01
CKS1B-202ENST00000368436 ASNA1O43681 348 aa15.01□□□□□ -0.01
CKS1B-202ENST00000368436 PRMT3O60678 531 aa15.01□□□□□ -0.01
CKS1B-202ENST00000368436 TPP2P29144 1249 aaPredicted RBP15.01□□□□□ -0.01
CKS1B-202ENST00000368436 ELK3P41970 407 aa15.01□□□□□ -0.01
CKS1B-202ENST00000368436 MLF1P58340 268 aa15.01□□□□□ -0.01
CKS1B-202ENST00000368436 FRG1Q14331 258 aaKnown RBP15.01□□□□□ -0.01
CKS1B-202ENST00000368436 PPP1R3AQ16821 1122 aa15.01□□□□□ -0.01
CKS1B-202ENST00000368436 STEAP4Q687X5 459 aa15.01□□□□□ -0.01
CKS1B-202ENST00000368436 TRMT10BQ6PF06 316 aaKnown RBP15.01□□□□□ -0.01
CKS1B-202ENST00000368436 PNPLA5Q7Z6Z6 429 aaPredicted RBP15.01□□□□□ -0.01
CKS1B-202ENST00000368436 CTAGE6Q86UF2 777 aa15.01□□□□□ -0.01
CKS1B-202ENST00000368436 THOC6Q86W42 341 aaKnown RBP15.01□□□□□ -0.01
CKS1B-202ENST00000368436 ZNF227Q86WZ6 799 aa15.01□□□□□ -0.01
CKS1B-202ENST00000368436 ARMC10Q8N2F6 343 aa15.01□□□□□ -0.01
CKS1B-202ENST00000368436 ANKRD53Q8N9V6 530 aa15.01□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms