RNA–Protein interactions for RNA: ENST00000368069.7

COPA-202, Transcript of coatomer protein complex subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene COPA, Length 4,664 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPA-202ENST00000368069 SLC15A1P46059 708 aa11.28□□□□□ -0.6
COPA-202ENST00000368069 ST3GAL4Q11206 333 aa11.28□□□□□ -0.6
COPA-202ENST00000368069 HDDC3Q8N4P3 179 aa11.28□□□□□ -0.6
COPA-202ENST00000368069 RHBDF1Q96CC6 855 aa11.28□□□□□ -0.6
COPA-202ENST00000368069 INPP5KQ9BT40 448 aa11.28□□□□□ -0.6
COPA-202ENST00000368069 NEUROD4Q9HD90 331 aa11.28□□□□□ -0.6
COPA-202ENST00000368069 UTS2RQ9UKP6 389 aa11.28□□□□□ -0.6
COPA-202ENST00000368069 ABCA3Q99758 1704 aa11.28□□□□□ -0.6
COPA-202ENST00000368069 ARHGEF33A8MVX0 844 aa11.28□□□□□ -0.6
COPA-202ENST00000368069 FAM47E-STBD1D6RA91 191 aa11.28□□□□□ -0.6
COPA-202ENST00000368069 H3BMQ9 156 aa11.28□□□□□ -0.6
COPA-202ENST00000368069 BTN3A3O00478 584 aa11.28□□□□□ -0.6
COPA-202ENST00000368069 GABBR2O75899 941 aa11.28□□□□□ -0.6
COPA-202ENST00000368069 MAGEA12P43365 314 aa11.28□□□□□ -0.6
COPA-202ENST00000368069 FAM189BP81408 668 aa11.28□□□□□ -0.6
COPA-202ENST00000368069 NPRL3Q12980 569 aa11.28□□□□□ -0.6
COPA-202ENST00000368069 TUBB3Q13509 450 aa11.28□□□□□ -0.6
COPA-202ENST00000368069 EXOC3L2Q2M3D2 409 aa11.28□□□□□ -0.6
COPA-202ENST00000368069 RTL4Q6ZR62 310 aa11.28□□□□□ -0.6
COPA-202ENST00000368069 IQCHQ86VS3 1027 aa11.28□□□□□ -0.6
COPA-202ENST00000368069 HS3ST5Q8IZT8 346 aa11.28□□□□□ -0.6
COPA-202ENST00000368069 TTLQ8NG68 377 aa11.28□□□□□ -0.6
COPA-202ENST00000368069 GLYATL1Q969I3 302 aa11.28□□□□□ -0.6
COPA-202ENST00000368069 KCTD7Q96MP8 289 aa11.28□□□□□ -0.6
COPA-202ENST00000368069 COG8Q96MW5 612 aa11.28□□□□□ -0.6
COPA-202ENST00000368069 MND1Q9BWT6 205 aa11.28□□□□□ -0.6
COPA-202ENST00000368069 ADAP2Q9NPF8 381 aa11.28□□□□□ -0.6
COPA-202ENST00000368069 PAK1IP1Q9NWT1 392 aaPredicted RBP11.28□□□□□ -0.6
COPA-202ENST00000368069 GMEB1Q9Y692 573 aa11.28□□□□□ -0.6
COPA-202ENST00000368069 BOLA2-SMG1P6H3BVE0 249 aa11.28□□□□□ -0.6
COPA-202ENST00000368069 MPIP34949 423 aa11.28□□□□□ -0.6
COPA-202ENST00000368069 IKBIPQ70UQ0 350 aa11.28□□□□□ -0.6
COPA-202ENST00000368069 CCDC80Q76M96 950 aa11.28□□□□□ -0.6
COPA-202ENST00000368069 CHERPQ8IWX8 916 aaKnown RBP11.28□□□□□ -0.6
COPA-202ENST00000368069 ZNF433Q8N7K0 673 aaPredicted RBP11.28□□□□□ -0.6
COPA-202ENST00000368069 MFSD2AQ8NA29 543 aa11.28□□□□□ -0.6
COPA-202ENST00000368069 ZNF675Q8TD23 568 aa11.28□□□□□ -0.6
COPA-202ENST00000368069 IRF7Q92985 503 aa11.28□□□□□ -0.6
COPA-202ENST00000368069 APIPQ96GX9 242 aa11.28□□□□□ -0.6
COPA-202ENST00000368069 SPACA7Q96KW9 195 aa11.28□□□□□ -0.6
COPA-202ENST00000368069 C11orf84Q9BUA3 381 aaPredicted RBP11.28□□□□□ -0.6
COPA-202ENST00000368069 KCNN2Q9H2S1 579 aa11.28□□□□□ -0.6
COPA-202ENST00000368069 ANKHQ9HCJ1 492 aa11.28□□□□□ -0.6
COPA-202ENST00000368069 TAS2R7Q9NYW3 318 aa11.28□□□□□ -0.6
COPA-202ENST00000368069 BACE2Q9Y5Z0 518 aa11.28□□□□□ -0.6
COPA-202ENST00000368069 LOXHD1Q8IVV2 1947 aa11.28□□□□□ -0.6
COPA-202ENST00000368069 HHLA1C9JL84 531 aa11.27□□□□□ -0.6
COPA-202ENST00000368069 MAGEB3O15480 346 aa11.27□□□□□ -0.6
COPA-202ENST00000368069 FGF18O76093 207 aa11.27□□□□□ -0.6
COPA-202ENST00000368069 GSRP00390 522 aa11.27□□□□□ -0.6
COPA-202ENST00000368069 DDX6P26196 483 aaKnown RBP eCLIP11.27□□□□□ -0.62e-8■□□□□ 8.4
COPA-202ENST00000368069 CD70P32970 193 aa11.27□□□□□ -0.6
COPA-202ENST00000368069 DCTP40126 519 aa11.27□□□□□ -0.6
COPA-202ENST00000368069 PRMT2P55345 433 aa11.27□□□□□ -0.6
COPA-202ENST00000368069 CRTC1Q6UUV9 634 aa11.27□□□□□ -0.6
COPA-202ENST00000368069 SH2D5Q6ZV89 423 aa11.27□□□□□ -0.6
COPA-202ENST00000368069 ADGRG2Q8IZP9 1017 aa11.27□□□□□ -0.6
COPA-202ENST00000368069 COX18Q8N8Q8 333 aa11.27□□□□□ -0.6
COPA-202ENST00000368069 ZBTB8BQ8NAP8 495 aaPredicted RBP11.27□□□□□ -0.6
COPA-202ENST00000368069 FAM46DQ8NEK8 389 aa11.27□□□□□ -0.6
COPA-202ENST00000368069 TBX5Q99593 518 aa11.27□□□□□ -0.6
COPA-202ENST00000368069 IFT27Q9BW83 186 aa11.27□□□□□ -0.6
COPA-202ENST00000368069 RAB11FIP5Q9BXF6 653 aa11.27□□□□□ -0.6
COPA-202ENST00000368069 CERS4Q9HA82 394 aa11.27□□□□□ -0.6
COPA-202ENST00000368069 MOV10Q9HCE1 1003 aaKnown RBP11.27□□□□□ -0.6
COPA-202ENST00000368069 POLE4Q9NR33 117 aa11.27□□□□□ -0.6
COPA-202ENST00000368069 GPRC5BQ9NZH0 403 aa11.27□□□□□ -0.6
COPA-202ENST00000368069 B4GAT1O43505 415 aa11.27□□□□□ -0.61
COPA-202ENST00000368069 RPS3P23396 243 aaKnown RBP eCLIP11.27□□□□□ -0.615e-7■■■□□ 19.1
COPA-202ENST00000368069 APLP1P51693 650 aa11.27□□□□□ -0.61
COPA-202ENST00000368069 ERVK-21P61565 698 aa11.27□□□□□ -0.61
COPA-202ENST00000368069 CLCA4Q14CN2 919 aa11.27□□□□□ -0.61
COPA-202ENST00000368069 SHQ1Q6PI26 577 aaKnown RBP11.27□□□□□ -0.61
COPA-202ENST00000368069 TMEM102Q8N9M5 508 aaPredicted RBP11.27□□□□□ -0.61
COPA-202ENST00000368069 TRUB1Q8WWH5 349 aaKnown RBP11.27□□□□□ -0.61
COPA-202ENST00000368069 SLC39A13Q96H72 371 aa11.27□□□□□ -0.61
COPA-202ENST00000368069 SRMSQ9H3Y6 488 aa11.27□□□□□ -0.61
COPA-202ENST00000368069 TAS2R9Q9NYW1 312 aa11.27□□□□□ -0.61
COPA-202ENST00000368069 SLAMF8Q9P0V8 285 aa11.27□□□□□ -0.61
COPA-202ENST00000368069 UBE2QL1A1L167 161 aa11.27□□□□□ -0.61
COPA-202ENST00000368069 MROH6A6NGR9 719 aa11.27□□□□□ -0.61
COPA-202ENST00000368069 GSTM3P21266 225 aa11.27□□□□□ -0.61
COPA-202ENST00000368069 KCNC4Q03721 635 aa11.27□□□□□ -0.61
COPA-202ENST00000368069 IDNKQ5T6J7 187 aa11.27□□□□□ -0.61
COPA-202ENST00000368069 DCUN1D3Q8IWE4 304 aa11.27□□□□□ -0.61
COPA-202ENST00000368069 TRAM1L1Q8N609 369 aa11.27□□□□□ -0.61
COPA-202ENST00000368069 TCEANCQ8N8B7 351 aa11.27□□□□□ -0.61
COPA-202ENST00000368069 TMEM145Q8NBT3 493 aa11.27□□□□□ -0.61
COPA-202ENST00000368069 SHKBP1Q8TBC3 707 aa11.27□□□□□ -0.61
COPA-202ENST00000368069 SNX33Q8WV41 574 aa11.27□□□□□ -0.61
COPA-202ENST00000368069 LGALS12Q96DT0 336 aa11.27□□□□□ -0.61
COPA-202ENST00000368069 TMEM138Q9NPI0 162 aa11.27□□□□□ -0.61
COPA-202ENST00000368069 MAGED1Q9Y5V3 778 aaPredicted RBP11.27□□□□□ -0.61
COPA-202ENST00000368069 NDUFS4O43181 175 aa11.27□□□□□ -0.61
COPA-202ENST00000368069 LATS1O95835 1130 aa11.27□□□□□ -0.61
COPA-202ENST00000368069 IL3P08700 152 aa11.27□□□□□ -0.61
COPA-202ENST00000368069 C1GALT1C1LP0DN25 315 aa11.27□□□□□ -0.61
COPA-202ENST00000368069 HSD3B1P14060 373 aa11.27□□□□□ -0.61
COPA-202ENST00000368069 CD72P21854 359 aa11.27□□□□□ -0.61
COPA-202ENST00000368069 HSD3B2P26439 372 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms