RNA–Protein interactions for RNA: ENST00000368021.7

USF1-203, Transcript of upstream transcription factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USF1, Length 1,807 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-203ENST00000368021 SLC9B2Q86UD5 537 aa11.56□□□□□ -0.56
USF1-203ENST00000368021 ADGRF3Q8IZF5 1079 aa11.56□□□□□ -0.56
USF1-203ENST00000368021 PGAM4Q8N0Y7 254 aa11.56□□□□□ -0.56
USF1-203ENST00000368021 LIX1Q8N485 282 aa11.56□□□□□ -0.56
USF1-203ENST00000368021 PCYOX1LQ8NBM8 494 aa11.56□□□□□ -0.56
USF1-203ENST00000368021 ZNF740Q8NDX6 193 aa11.56□□□□□ -0.56
USF1-203ENST00000368021 FAM46DQ8NEK8 389 aa11.56□□□□□ -0.56
USF1-203ENST00000368021 TTLQ8NG68 377 aa11.56□□□□□ -0.56
USF1-203ENST00000368021 OR2L3Q8NG85 312 aa11.56□□□□□ -0.56
USF1-203ENST00000368021 OR4E2Q8NGC2 313 aa11.56□□□□□ -0.56
USF1-203ENST00000368021 SLC37A2Q8TED4 501 aa11.56□□□□□ -0.56
USF1-203ENST00000368021 ZDHHC1Q8WTX9 485 aa11.56□□□□□ -0.56
USF1-203ENST00000368021 ROPN1LQ96C74 230 aa11.56□□□□□ -0.56
USF1-203ENST00000368021 PRAP1Q96NZ9 151 aa11.56□□□□□ -0.56
USF1-203ENST00000368021 SARGQ9BW04 601 aa11.56□□□□□ -0.56
USF1-203ENST00000368021 MRPS30Q9NP92 439 aaKnown RBP11.56□□□□□ -0.56
USF1-203ENST00000368021 TMEM184CQ9NVA4 438 aa11.56□□□□□ -0.56
USF1-203ENST00000368021 GOLGA4Q13439 2230 aaKnown RBP11.56□□□□□ -0.56
USF1-203ENST00000368021 SNRNP200O75643 2136 aaKnown RBP11.56□□□□□ -0.56
USF1-203ENST00000368021 TRBV23OR9-2A0A075B6M9 112 aa11.56□□□□□ -0.56
USF1-203ENST00000368021 C4orf47A7E2U8 309 aa11.56□□□□□ -0.56
USF1-203ENST00000368021 ANGPT2O15123 496 aa11.56□□□□□ -0.56
USF1-203ENST00000368021 ETHE1O95571 254 aa11.56□□□□□ -0.56
USF1-203ENST00000368021 LYNP07948 512 aa11.56□□□□□ -0.56
USF1-203ENST00000368021 CAPN3P20807 821 aa11.56□□□□□ -0.56
USF1-203ENST00000368021 GSTM2P28161 218 aa11.56□□□□□ -0.56
USF1-203ENST00000368021 CMPK1P30085 196 aa11.56□□□□□ -0.56
USF1-203ENST00000368021 RAP1GDS1P52306 607 aa11.56□□□□□ -0.56
USF1-203ENST00000368021 CLDN8P56748 225 aa11.56□□□□□ -0.56
USF1-203ENST00000368021 C21orf59P57076 290 aa11.56□□□□□ -0.56
USF1-203ENST00000368021 RPS13P62277 151 aaKnown RBP11.56□□□□□ -0.56
USF1-203ENST00000368021 MEF2AQ02078 507 aaPredicted RBP11.56□□□□□ -0.56
USF1-203ENST00000368021 ACSM2AQ08AH3 577 aa11.56□□□□□ -0.56
USF1-203ENST00000368021 TBL3Q12788 808 aaKnown RBP11.56□□□□□ -0.56
USF1-203ENST00000368021 C1orf61Q13536 156 aa11.56□□□□□ -0.56
USF1-203ENST00000368021 PTGR1Q14914 329 aa11.56□□□□□ -0.56
USF1-203ENST00000368021 PLCL1Q15111 1095 aa11.56□□□□□ -0.56
USF1-203ENST00000368021 SF1Q15637 639 aaKnown RBP11.56□□□□□ -0.56
USF1-203ENST00000368021 VPS26BQ4G0F5 336 aa11.56□□□□□ -0.56
USF1-203ENST00000368021 ACSM2BQ68CK6 577 aa11.56□□□□□ -0.56
USF1-203ENST00000368021 ADNP2Q6IQ32 1131 aa11.56□□□□□ -0.56
USF1-203ENST00000368021 NOXRED1Q6NXP6 359 aa11.56□□□□□ -0.56
USF1-203ENST00000368021 GALNT18Q6P9A2 607 aa11.56□□□□□ -0.56
USF1-203ENST00000368021 RABEPKQ7Z6M1 372 aa11.56□□□□□ -0.56
USF1-203ENST00000368021 DEFB107AQ8IZN7 70 aa11.56□□□□□ -0.56
USF1-203ENST00000368021 RNF175Q8N4F7 328 aa11.56□□□□□ -0.56
USF1-203ENST00000368021 CHTF18Q8WVB6 975 aa11.56□□□□□ -0.56
USF1-203ENST00000368021 PATE1Q8WXA2 126 aa11.56□□□□□ -0.56
USF1-203ENST00000368021 APOLD1Q96LR9 279 aa11.56□□□□□ -0.56
USF1-203ENST00000368021 SERPINI1Q99574 410 aa11.56□□□□□ -0.56
USF1-203ENST00000368021 ZBTB18Q99592 522 aa11.56□□□□□ -0.56
USF1-203ENST00000368021 NPAS2Q99743 824 aa11.56□□□□□ -0.56
USF1-203ENST00000368021 THTPAQ9BU02 230 aa11.56□□□□□ -0.56
USF1-203ENST00000368021 CAAP1Q9H8G2 361 aa11.56□□□□□ -0.56
USF1-203ENST00000368021 ERVMER34-1Q9H9K5 563 aa11.56□□□□□ -0.56
USF1-203ENST00000368021 IL21RQ9HBE5 538 aa11.56□□□□□ -0.56
USF1-203ENST00000368021 SPHK1Q9NYA1 384 aa11.56□□□□□ -0.56
USF1-203ENST00000368021 PRPF19Q9UMS4 504 aaKnown RBP11.56□□□□□ -0.56
USF1-203ENST00000368021 DLGAP4Q9Y2H0 992 aa11.56□□□□□ -0.56
USF1-203ENST00000368021 ENTPD2Q9Y5L3 495 aa11.56□□□□□ -0.56
USF1-203ENST00000368021 SNX11Q9Y5W9 270 aa11.56□□□□□ -0.56
USF1-203ENST00000368021 CABIN1Q9Y6J0 2220 aa11.55□□□□□ -0.56
USF1-203ENST00000368021 TRBC2A0A5B9 178 aa11.55□□□□□ -0.56
USF1-203ENST00000368021 ANKDD1BA6NHY2 528 aa11.55□□□□□ -0.56
USF1-203ENST00000368021 BTN3A3O00478 584 aa11.55□□□□□ -0.56
USF1-203ENST00000368021 CDX4O14627 284 aaPredicted RBP11.55□□□□□ -0.56
USF1-203ENST00000368021 MRASO14807 208 aa11.55□□□□□ -0.56
USF1-203ENST00000368021 EEDO75530 441 aaKnown RBP11.55□□□□□ -0.56
USF1-203ENST00000368021 MYO1DO94832 1006 aa11.55□□□□□ -0.56
USF1-203ENST00000368021 FKBP9O95302 570 aa11.55□□□□□ -0.56
USF1-203ENST00000368021 SDC1P18827 310 aa11.55□□□□□ -0.56
USF1-203ENST00000368021 PTX3P26022 381 aaPredicted RBP11.55□□□□□ -0.56
USF1-203ENST00000368021 IL12AP29459 219 aa11.55□□□□□ -0.56
USF1-203ENST00000368021 GRK3P35626 688 aa11.55□□□□□ -0.56
USF1-203ENST00000368021 FASLGP48023 281 aa11.55□□□□□ -0.56
USF1-203ENST00000368021 BNC1Q01954 994 aa11.55□□□□□ -0.56
USF1-203ENST00000368021 TEAD4Q15561 434 aa11.55□□□□□ -0.56
USF1-203ENST00000368021 C6orf163Q5TEZ5 329 aa11.55□□□□□ -0.56
USF1-203ENST00000368021 STPG1Q5TH74 334 aa11.55□□□□□ -0.56
USF1-203ENST00000368021 BORAQ6PGQ7 559 aa11.55□□□□□ -0.56
USF1-203ENST00000368021 LRRC74BQ6ZQY2 392 aa11.55□□□□□ -0.56
USF1-203ENST00000368021 VN1R5Q7Z5H4 357 aa11.55□□□□□ -0.56
USF1-203ENST00000368021 SCUBE1Q8IWY4 988 aa11.55□□□□□ -0.56
USF1-203ENST00000368021 ULK2Q8IYT8 1036 aa11.55□□□□□ -0.56
USF1-203ENST00000368021 MINDY1Q8N5J2 469 aa11.55□□□□□ -0.56
USF1-203ENST00000368021 EFHD2Q96C19 240 aaPredicted RBP11.55□□□□□ -0.56
USF1-203ENST00000368021 DPY30Q9C005 99 aa11.55□□□□□ -0.56
USF1-203ENST00000368021 CLMPQ9H6B4 373 aa11.55□□□□□ -0.56
USF1-203ENST00000368021 WDR41Q9HAD4 459 aa11.55□□□□□ -0.56
USF1-203ENST00000368021 RHBDL2Q9NX52 303 aa11.55□□□□□ -0.56
USF1-203ENST00000368021 WDFY3Q8IZQ1 3526 aa11.54□□□□□ -0.56
USF1-203ENST00000368021 A0A088AWK7 358 aa11.54□□□□□ -0.56
USF1-203ENST00000368021 CCDC154A6NI56 674 aa11.54□□□□□ -0.56
USF1-203ENST00000368021 ISM1B1AKI9 464 aa11.54□□□□□ -0.56
USF1-203ENST00000368021 LMO7DNF2Z398 122 aa11.54□□□□□ -0.56
USF1-203ENST00000368021 AQP9O43315 295 aa11.54□□□□□ -0.56
USF1-203ENST00000368021 PRMT3O60678 531 aa11.54□□□□□ -0.56
USF1-203ENST00000368021 SEMA3DO95025 777 aa11.54□□□□□ -0.56
USF1-203ENST00000368021 NPPAP01160 153 aa11.54□□□□□ -0.56
USF1-203ENST00000368021 IL6P05231 212 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms