RNA–Protein interactions for RNA: ENST00000367279.8

PTPN7-202, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN7, Length 3,265 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-202ENST00000367279 GGHQ92820 318 aa11.86□□□□□ -0.51
PTPN7-202ENST00000367279 NDUFAF4Q9P032 175 aa11.86□□□□□ -0.51
PTPN7-202ENST00000367279 CAB39Q9Y376 341 aaPredicted RBP11.86□□□□□ -0.51
PTPN7-202ENST00000367279 LYVE1Q9Y5Y7 322 aa11.86□□□□□ -0.51
PTPN7-202ENST00000367279 FADS2P1A8MWK0 482 aa11.85□□□□□ -0.51
PTPN7-202ENST00000367279 GFRA2O00451 464 aa11.85□□□□□ -0.51
PTPN7-202ENST00000367279 ADAMDEC1O15204 470 aa11.85□□□□□ -0.51
PTPN7-202ENST00000367279 AQP9O43315 295 aa11.85□□□□□ -0.51
PTPN7-202ENST00000367279 PRMT3O60678 531 aa11.85□□□□□ -0.51
PTPN7-202ENST00000367279 ALOX5P09917 674 aa11.85□□□□□ -0.51
PTPN7-202ENST00000367279 IDSP22304 550 aa11.85□□□□□ -0.51
PTPN7-202ENST00000367279 PRPH2P23942 346 aa11.85□□□□□ -0.51
PTPN7-202ENST00000367279 HNF4AP41235 474 aa11.85□□□□□ -0.51
PTPN7-202ENST00000367279 CRYBA2P53672 197 aa11.85□□□□□ -0.51
PTPN7-202ENST00000367279 CRISP3P54108 245 aa11.85□□□□□ -0.51
PTPN7-202ENST00000367279 PTPN5P54829 565 aa11.85□□□□□ -0.51
PTPN7-202ENST00000367279 SELENOWP63302 87 aa11.85□□□□□ -0.51
PTPN7-202ENST00000367279 RAE1P78406 368 aaKnown RBP11.85□□□□□ -0.51
PTPN7-202ENST00000367279 ST3GAL4Q11206 333 aa11.85□□□□□ -0.51
PTPN7-202ENST00000367279 VEZF1Q14119 521 aa11.85□□□□□ -0.51
PTPN7-202ENST00000367279 SLBPQ14493 270 aaKnown RBP eCLIP11.85□□□□□ -0.51
PTPN7-202ENST00000367279 ARMCX4Q5H9R4 360 aa11.85□□□□□ -0.51
PTPN7-202ENST00000367279 GCNT6Q5T4J0 391 aa11.85□□□□□ -0.51
PTPN7-202ENST00000367279 CFAP206Q8IYR0 622 aa11.85□□□□□ -0.51
PTPN7-202ENST00000367279 FAM83FQ8NEG4 500 aaPredicted RBP11.85□□□□□ -0.51
PTPN7-202ENST00000367279 PHF10Q8WUB8 498 aaKnown RBP11.85□□□□□ -0.51
PTPN7-202ENST00000367279 ATL1Q8WXF7 558 aa11.85□□□□□ -0.51
PTPN7-202ENST00000367279 PPCDCQ96CD2 204 aa11.85□□□□□ -0.51
PTPN7-202ENST00000367279 SLC46A2Q9BY10 475 aa11.85□□□□□ -0.51
PTPN7-202ENST00000367279 RERGLQ9H628 205 aa11.85□□□□□ -0.51
PTPN7-202ENST00000367279 HCFC1R1Q9NWW0 138 aa11.85□□□□□ -0.51
PTPN7-202ENST00000367279 LINC00854A0A1B0GVQ3 168 aa11.85□□□□□ -0.51
PTPN7-202ENST00000367279 FAM227AF5H4B4 570 aa11.85□□□□□ -0.51
PTPN7-202ENST00000367279 CYP2A6P11509 494 aaPredicted RBP11.85□□□□□ -0.51
PTPN7-202ENST00000367279 PABPC1P11940 636 aaKnown RBP11.85□□□□□ -0.51
PTPN7-202ENST00000367279 MED27Q6P2C8 311 aa11.85□□□□□ -0.51
PTPN7-202ENST00000367279 FAHD1Q6P587 224 aa11.85□□□□□ -0.51
PTPN7-202ENST00000367279 TTC23LQ6PF05 361 aa11.85□□□□□ -0.51
PTPN7-202ENST00000367279 HTR3DQ70Z44 454 aa11.85□□□□□ -0.51
PTPN7-202ENST00000367279 TRMT11Q7Z4G4 463 aaKnown RBP11.85□□□□□ -0.51
PTPN7-202ENST00000367279 FAM124AQ86V42 546 aa11.85□□□□□ -0.51
PTPN7-202ENST00000367279 TRAPPC5Q8IUR0 188 aa11.85□□□□□ -0.51
PTPN7-202ENST00000367279 TCEAL8Q8IYN2 117 aa11.85□□□□□ -0.51
PTPN7-202ENST00000367279 RASGEF1AQ8N9B8 481 aa11.85□□□□□ -0.51
PTPN7-202ENST00000367279 HRASLS5Q96KN8 279 aa11.85□□□□□ -0.51
PTPN7-202ENST00000367279 EPYCQ99645 322 aa11.85□□□□□ -0.51
PTPN7-202ENST00000367279 KCNS3Q9BQ31 491 aa11.85□□□□□ -0.51
PTPN7-202ENST00000367279 LINC00597Q9H2U6 94 aa11.85□□□□□ -0.51
PTPN7-202ENST00000367279 MS4A12Q9NXJ0 267 aa11.85□□□□□ -0.51
PTPN7-202ENST00000367279 SLC6A14Q9UN76 642 aa11.85□□□□□ -0.51
PTPN7-202ENST00000367279 ATP11BQ9Y2G3 1177 aa11.85□□□□□ -0.51
PTPN7-202ENST00000367279 IGLV3-16A0A075B6K0 115 aa11.85□□□□□ -0.51
PTPN7-202ENST00000367279 H3BM21 787 aa11.85□□□□□ -0.51
PTPN7-202ENST00000367279 M0R082 166 aa11.85□□□□□ -0.51
PTPN7-202ENST00000367279 PCDH17O14917 1159 aa11.85□□□□□ -0.51
PTPN7-202ENST00000367279 SLC16A5O15375 505 aa11.85□□□□□ -0.51
PTPN7-202ENST00000367279 ATG13O75143 517 aa11.85□□□□□ -0.51
PTPN7-202ENST00000367279 RFPL2O75678 378 aa11.85□□□□□ -0.51
PTPN7-202ENST00000367279 KLK1P06870 262 aa11.85□□□□□ -0.51
PTPN7-202ENST00000367279 GSTM1P09488 218 aa11.85□□□□□ -0.51
PTPN7-202ENST00000367279 IMPA1P29218 277 aa11.85□□□□□ -0.51
PTPN7-202ENST00000367279 TIA1P31483 386 aaKnown RBP eCLIP11.85□□□□□ -0.51
PTPN7-202ENST00000367279 GGT2P36268 569 aa11.85□□□□□ -0.51
PTPN7-202ENST00000367279 ALDH9A1P49189 494 aa11.85□□□□□ -0.51
PTPN7-202ENST00000367279 PPP5CP53041 499 aa11.85□□□□□ -0.51
PTPN7-202ENST00000367279 RPS26P62854 115 aaKnown RBP11.85□□□□□ -0.51
PTPN7-202ENST00000367279 TPRG1LQ5T0D9 272 aa11.85□□□□□ -0.51
PTPN7-202ENST00000367279 GRHL2Q6ISB3 625 aa11.85□□□□□ -0.51
PTPN7-202ENST00000367279 DDX53Q86TM3 631 aaKnown RBP11.85□□□□□ -0.51
PTPN7-202ENST00000367279 CACTIN-AS1Q8N1I8 211 aa11.85□□□□□ -0.51
PTPN7-202ENST00000367279 AMER2Q8N7J2 671 aa11.85□□□□□ -0.51
PTPN7-202ENST00000367279 RHOXF1Q8NHV9 184 aa11.85□□□□□ -0.51
PTPN7-202ENST00000367279 WDR48Q8TAF3 677 aa11.85□□□□□ -0.51
PTPN7-202ENST00000367279 STARD8Q92502 1023 aa11.85□□□□□ -0.51
PTPN7-202ENST00000367279 AP2M1Q96CW1 435 aa11.85□□□□□ -0.51
PTPN7-202ENST00000367279 ECHDC3Q96DC8 303 aa11.85□□□□□ -0.51
PTPN7-202ENST00000367279 VPS35Q96QK1 796 aa11.85□□□□□ -0.51
PTPN7-202ENST00000367279 MCCC1Q96RQ3 725 aaPredicted RBP11.85□□□□□ -0.51
PTPN7-202ENST00000367279 IL4I1Q96RQ9 567 aa11.85□□□□□ -0.51
PTPN7-202ENST00000367279 CCM2Q9BSQ5 444 aa11.85□□□□□ -0.51
PTPN7-202ENST00000367279 SORBS1Q9BX66 1292 aaKnown RBP11.85□□□□□ -0.51
PTPN7-202ENST00000367279 FBXO8Q9NRD0 319 aa11.85□□□□□ -0.51
PTPN7-202ENST00000367279 SPATA6Q9NWH7 488 aaPredicted RBP11.85□□□□□ -0.51
PTPN7-202ENST00000367279 ZNF282Q9UDV7 671 aaPredicted RBP11.85□□□□□ -0.51
PTPN7-202ENST00000367279 CORO2BQ9UQ03 480 aa11.85□□□□□ -0.51
PTPN7-202ENST00000367279 DYRK1BQ9Y463 629 aa11.85□□□□□ -0.51
PTPN7-202ENST00000367279 SCN8AQ9UQD0 1980 aa11.85□□□□□ -0.51
PTPN7-202ENST00000367279 EIF3FO00303 357 aaPredicted RBP11.84□□□□□ -0.51
PTPN7-202ENST00000367279 KPNA3O00505 521 aaPredicted RBP11.84□□□□□ -0.51
PTPN7-202ENST00000367279 TGM5O43548 720 aa11.84□□□□□ -0.51
PTPN7-202ENST00000367279 PTHP01270 115 aa11.84□□□□□ -0.51
PTPN7-202ENST00000367279 TGM1P22735 817 aa11.84□□□□□ -0.51
PTPN7-202ENST00000367279 GRK5P34947 590 aa11.84□□□□□ -0.51
PTPN7-202ENST00000367279 TAS2R50P59544 299 aa11.84□□□□□ -0.51
PTPN7-202ENST00000367279 TEAD4Q15561 434 aa11.84□□□□□ -0.51
PTPN7-202ENST00000367279 ARMC8Q8IUR7 673 aa11.84□□□□□ -0.51
PTPN7-202ENST00000367279 CEP19Q96LK0 163 aa11.84□□□□□ -0.51
PTPN7-202ENST00000367279 C11orf16Q9NQ32 467 aa11.84□□□□□ -0.51
PTPN7-202ENST00000367279 KLHL42Q9P2K6 505 aa11.84□□□□□ -0.51
PTPN7-202ENST00000367279 CLCA1A8K7I4 914 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms