RNA–Protein interactions for RNA: ENST00000367255.9

SYNE1-207, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SYNE1, Length 27,748 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-207ENST00000367255 ADPRHL1Q8NDY3 354 aa3.65□□□□□ -1.83
SYNE1-207ENST00000367255 SLC16A10Q8TF71 515 aa3.65□□□□□ -1.83
SYNE1-207ENST00000367255 SLIT2O94813 1529 aa3.65□□□□□ -1.83
SYNE1-207ENST00000367255 TMEM82A0PJX8 343 aa3.65□□□□□ -1.83
SYNE1-207ENST00000367255 HLA-HP01893 362 aa3.65□□□□□ -1.83
SYNE1-207ENST00000367255 MT-ND5P03915 603 aa3.65□□□□□ -1.83
SYNE1-207ENST00000367255 GGT5P36269 586 aa3.65□□□□□ -1.83
SYNE1-207ENST00000367255 IL10RBQ08334 325 aa3.65□□□□□ -1.83
SYNE1-207ENST00000367255 DAG1Q14118 895 aa3.65□□□□□ -1.83
SYNE1-207ENST00000367255 SURF2Q15527 256 aaPredicted RBP3.65□□□□□ -1.83
SYNE1-207ENST00000367255 OVCA2Q8WZ82 227 aa3.65□□□□□ -1.83
SYNE1-207ENST00000367255 CHRDL1Q9BU40 450 aa3.65□□□□□ -1.83
SYNE1-207ENST00000367255 SPRTNQ9H040 489 aaPredicted RBP3.65□□□□□ -1.83
SYNE1-207ENST00000367255 GRK4P32298 578 aa3.64□□□□□ -1.83
SYNE1-207ENST00000367255 SF3A2Q15428 464 aaKnown RBP3.64□□□□□ -1.83
SYNE1-207ENST00000367255 GPRIN3Q6ZVF9 776 aa3.64□□□□□ -1.83
SYNE1-207ENST00000367255 ZBED6CLQ96FA7 236 aaPredicted RBP3.64□□□□□ -1.83
SYNE1-207ENST00000367255 SLC19A3Q9BZV2 496 aa3.64□□□□□ -1.83
SYNE1-207ENST00000367255 RAB6BQ9NRW1 208 aa3.64□□□□□ -1.83
SYNE1-207ENST00000367255 MRC1P22897 1456 aa3.64□□□□□ -1.83
SYNE1-207ENST00000367255 CPNE6O95741 557 aa3.64□□□□□ -1.83
SYNE1-207ENST00000367255 YWHAZP63104 245 aaKnown RBP3.64□□□□□ -1.83
SYNE1-207ENST00000367255 BEX3Q00994 111 aa3.64□□□□□ -1.83
SYNE1-207ENST00000367255 ARHGEF7Q14155 803 aa3.64□□□□□ -1.83
SYNE1-207ENST00000367255 GPR139Q6DWJ6 353 aa3.64□□□□□ -1.83
SYNE1-207ENST00000367255 FAM174AQ8TBP5 190 aa3.64□□□□□ -1.83
SYNE1-207ENST00000367255 SOWAHBA6NEL2 793 aa3.64□□□□□ -1.83
SYNE1-207ENST00000367255 H0YGN5 161 aa3.64□□□□□ -1.83
SYNE1-207ENST00000367255 CDKL1Q00532 357 aa3.64□□□□□ -1.83
SYNE1-207ENST00000367255 MAPKAPK3Q16644 382 aa3.64□□□□□ -1.83
SYNE1-207ENST00000367255 MIDNQ504T8 468 aa3.64□□□□□ -1.83
SYNE1-207ENST00000367255 SAPCD1Q5SSQ6 148 aa3.64□□□□□ -1.83
SYNE1-207ENST00000367255 C6orf183Q5T699 404 aa3.64□□□□□ -1.83
SYNE1-207ENST00000367255 GPR148Q8TDV2 347 aa3.64□□□□□ -1.83
SYNE1-207ENST00000367255 LENG8Q96PV6 779 aaPredicted RBP3.64□□□□□ -1.83
SYNE1-207ENST00000367255 LMAN1LQ9HAT1 526 aa3.64□□□□□ -1.83
SYNE1-207ENST00000367255 C11orf16Q9NQ32 467 aa3.64□□□□□ -1.83
SYNE1-207ENST00000367255 NIPSNAP3AQ9UFN0 247 aaPredicted RBP3.64□□□□□ -1.83
SYNE1-207ENST00000367255 DLGAP4Q9Y2H0 992 aa3.64□□□□□ -1.83
SYNE1-207ENST00000367255 NFS1Q9Y697 457 aa3.64□□□□□ -1.83
SYNE1-207ENST00000367255 OR6B2Q6IFH4 312 aa3.64□□□□□ -1.83
SYNE1-207ENST00000367255 MILR1Q7Z6M3 343 aa3.64□□□□□ -1.83
SYNE1-207ENST00000367255 S100PBPQ96BU1 408 aa3.64□□□□□ -1.83
SYNE1-207ENST00000367255 FUBP3Q96I24 572 aaKnown RBP eCLIP3.64□□□□□ -1.83
SYNE1-207ENST00000367255 C8orf37Q96NL8 207 aa3.64□□□□□ -1.83
SYNE1-207ENST00000367255 LXNQ9BS40 222 aa3.64□□□□□ -1.83
SYNE1-207ENST00000367255 COMMD4Q9H0A8 199 aa3.64□□□□□ -1.83
SYNE1-207ENST00000367255 KCNG2Q9UJ96 466 aa3.64□□□□□ -1.83
SYNE1-207ENST00000367255 FAM166BA8MTA8 275 aa3.64□□□□□ -1.83
SYNE1-207ENST00000367255 M0R129 80 aa3.64□□□□□ -1.83
SYNE1-207ENST00000367255 RHCEP18577 417 aa3.64□□□□□ -1.83
SYNE1-207ENST00000367255 AANATQ16613 207 aa3.64□□□□□ -1.83
SYNE1-207ENST00000367255 DPPA2Q7Z7J5 298 aa3.64□□□□□ -1.83
SYNE1-207ENST00000367255 TCP10LQ8TDR4 215 aa3.64□□□□□ -1.83
SYNE1-207ENST00000367255 LGR4Q9BXB1 951 aa3.64□□□□□ -1.83
SYNE1-207ENST00000367255 KCTD3Q9Y597 815 aa3.64□□□□□ -1.83
SYNE1-207ENST00000367255 VWDEQ8N2E2 1590 aa3.64□□□□□ -1.83
SYNE1-207ENST00000367255 A8MUA0 341 aa3.64□□□□□ -1.83
SYNE1-207ENST00000367255 PPP1R2P9O14990 202 aa3.64□□□□□ -1.83
SYNE1-207ENST00000367255 SLC16A6O15403 523 aa3.64□□□□□ -1.83
SYNE1-207ENST00000367255 TOX4O94842 621 aa3.64□□□□□ -1.83
SYNE1-207ENST00000367255 GPR15P49685 360 aa3.64□□□□□ -1.83
SYNE1-207ENST00000367255 CRISP3P54108 245 aa3.64□□□□□ -1.83
SYNE1-207ENST00000367255 MINDY4Q4G0A6 757 aa3.64□□□□□ -1.83
SYNE1-207ENST00000367255 BTBD8Q5XKL5 378 aa3.64□□□□□ -1.83
SYNE1-207ENST00000367255 HSD17B13Q7Z5P4 300 aaPredicted RBP3.64□□□□□ -1.83
SYNE1-207ENST00000367255 TOP6BLQ8N6T0 577 aa3.64□□□□□ -1.83
SYNE1-207ENST00000367255 PYCR2Q96C36 320 aa3.64□□□□□ -1.83
SYNE1-207ENST00000367255 FCRL1Q96LA6 429 aa3.64□□□□□ -1.83
SYNE1-207ENST00000367255 CNTN3Q9P232 1028 aa3.64□□□□□ -1.83
SYNE1-207ENST00000367255 VEGFDO43915 354 aa3.64□□□□□ -1.83
SYNE1-207ENST00000367255 RFPL1O75677 317 aa3.64□□□□□ -1.83
SYNE1-207ENST00000367255 DLDP09622 509 aaKnown RBP3.64□□□□□ -1.83
SYNE1-207ENST00000367255 RPS19P39019 145 aaKnown RBP3.64□□□□□ -1.83
SYNE1-207ENST00000367255 KCNA10Q16322 511 aa3.64□□□□□ -1.83
SYNE1-207ENST00000367255 PLPPR4Q7Z2D5 763 aa3.64□□□□□ -1.83
SYNE1-207ENST00000367255 TMEM80Q96HE8 168 aa3.64□□□□□ -1.83
SYNE1-207ENST00000367255 FAM46AQ96IP4 442 aaKnown RBP3.64□□□□□ -1.83
SYNE1-207ENST00000367255 CITED2Q99967 270 aaPredicted RBP3.64□□□□□ -1.83
SYNE1-207ENST00000367255 C1GALT1Q9NS00 363 aa3.64□□□□□ -1.83
SYNE1-207ENST00000367255 PIGVQ9NUD9 493 aa3.64□□□□□ -1.83
SYNE1-207ENST00000367255 L7N2F9 121 aa3.64□□□□□ -1.83
SYNE1-207ENST00000367255 SNCGO76070 127 aa3.64□□□□□ -1.83
SYNE1-207ENST00000367255 CNOT4O95628 575 aaKnown RBP3.64□□□□□ -1.83
SYNE1-207ENST00000367255 KELP23276 732 aa3.64□□□□□ -1.83
SYNE1-207ENST00000367255 TGFB2P61812 414 aa3.64□□□□□ -1.83
SYNE1-207ENST00000367255 RPL24P83731 157 aaKnown RBP3.64□□□□□ -1.83
SYNE1-207ENST00000367255 C11orf96Q7Z7L8 435 aa3.64□□□□□ -1.83
SYNE1-207ENST00000367255 TMEM139Q8IV31 216 aa3.64□□□□□ -1.83
SYNE1-207ENST00000367255 EDAQ92838 391 aa3.64□□□□□ -1.83
SYNE1-207ENST00000367255 ZC3HAV1LQ96H79 300 aaKnown RBP3.64□□□□□ -1.83
SYNE1-207ENST00000367255 SLITRK1Q96PX8 696 aa3.64□□□□□ -1.83
SYNE1-207ENST00000367255 SLC38A1Q9H2H9 487 aa3.64□□□□□ -1.83
SYNE1-207ENST00000367255 CCDC86Q9H6F5 360 aaKnown RBP3.64□□□□□ -1.83
SYNE1-207ENST00000367255 GREM2Q9H772 168 aa3.64□□□□□ -1.83
SYNE1-207ENST00000367255 SRRDQ9UH36 339 aa3.64□□□□□ -1.83
SYNE1-207ENST00000367255 C1GALT1C1LP0DN25 315 aa3.64□□□□□ -1.83
SYNE1-207ENST00000367255 OTX1P32242 354 aaPredicted RBP3.64□□□□□ -1.83
SYNE1-207ENST00000367255 GGTA1PQ4G0N0 100 aa3.64□□□□□ -1.83
SYNE1-207ENST00000367255 MFSD14BQ5SR56 506 aa3.64□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 81.6 ms