RNA–Protein interactions for RNA: ENST00000367042.5

CD46-208, Transcript of CD46 molecule, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD46, Length 3,326 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-208ENST00000367042 TUBA3EQ6PEY2 450 aa7.88□□□□□ -1.15
CD46-208ENST00000367042 LINC00299Q6ZSB3 139 aa7.88□□□□□ -1.15
CD46-208ENST00000367042 LRRC70Q7Z2Q7 622 aa7.88□□□□□ -1.15
CD46-208ENST00000367042 NPAS3Q8IXF0 933 aa7.88□□□□□ -1.15
CD46-208ENST00000367042 C2orf73Q8N5S3 287 aaPredicted RBP7.88□□□□□ -1.15
CD46-208ENST00000367042 ARL14EPQ8N8R7 260 aaPredicted RBP7.88□□□□□ -1.15
CD46-208ENST00000367042 ASCC1Q8N9N2 400 aaKnown RBP7.88□□□□□ -1.15
CD46-208ENST00000367042 HJURPQ8NCD3 748 aaPredicted RBP7.88□□□□□ -1.15
CD46-208ENST00000367042 OR52E4Q8NGH9 312 aa7.88□□□□□ -1.15
CD46-208ENST00000367042 SCAMP4Q969E2 229 aa7.88□□□□□ -1.15
CD46-208ENST00000367042 TESCQ96BS2 214 aa7.88□□□□□ -1.15
CD46-208ENST00000367042 SLC35A5Q9BS91 424 aa7.88□□□□□ -1.15
CD46-208ENST00000367042 GABARAPL1Q9H0R8 117 aa7.88□□□□□ -1.15
CD46-208ENST00000367042 RPRD1BQ9NQG5 326 aaKnown RBP7.88□□□□□ -1.15
CD46-208ENST00000367042 PLSCR3Q9NRY6 295 aa7.88□□□□□ -1.15
CD46-208ENST00000367042 POFUT2Q9Y2G5 429 aa7.88□□□□□ -1.15
CD46-208ENST00000367042 ANKRD34BA5PLL1 514 aa7.88□□□□□ -1.15
CD46-208ENST00000367042 CCDC182A6NF36 153 aa7.88□□□□□ -1.15
CD46-208ENST00000367042 GABRR3A8MPY1 467 aa7.88□□□□□ -1.15
CD46-208ENST00000367042 YY2O15391 372 aa7.88□□□□□ -1.15
CD46-208ENST00000367042 C6orf47O95873 294 aa7.88□□□□□ -1.15
CD46-208ENST00000367042 IGSF6O95976 241 aa7.88□□□□□ -1.15
CD46-208ENST00000367042 ANXA8P13928 327 aa7.88□□□□□ -1.15
CD46-208ENST00000367042 TNNI3P19429 210 aa7.88□□□□□ -1.15
CD46-208ENST00000367042 PSMA1P25786 263 aaKnown RBP7.88□□□□□ -1.15
CD46-208ENST00000367042 AOAHP28039 575 aa7.88□□□□□ -1.15
CD46-208ENST00000367042 PTPN6P29350 595 aa7.88□□□□□ -1.15
CD46-208ENST00000367042 CNR2P34972 360 aa7.88□□□□□ -1.15
CD46-208ENST00000367042 ALDH9A1P49189 494 aa7.88□□□□□ -1.15
CD46-208ENST00000367042 NKX3-2P78367 333 aa7.88□□□□□ -1.15
CD46-208ENST00000367042 RGNQ15493 299 aa7.88□□□□□ -1.15
CD46-208ENST00000367042 PYDC2Q56P42 97 aa7.88□□□□□ -1.15
CD46-208ENST00000367042 EEF1AKMT2Q5JPI9 291 aaKnown RBP7.88□□□□□ -1.15
CD46-208ENST00000367042 TYW3Q6IPR3 259 aaKnown RBP7.88□□□□□ -1.15
CD46-208ENST00000367042 ZNF852Q6ZMS4 543 aa7.88□□□□□ -1.15
CD46-208ENST00000367042 TRIB2Q92519 343 aa7.88□□□□□ -1.15
CD46-208ENST00000367042 PIK3R3Q92569 461 aa7.88□□□□□ -1.15
CD46-208ENST00000367042 DIRAS2Q96HU8 199 aa7.88□□□□□ -1.15
CD46-208ENST00000367042 POLR2J2Q9GZM3 115 aaKnown RBP7.88□□□□□ -1.15
CD46-208ENST00000367042 CTPS2Q9NRF8 586 aa7.88□□□□□ -1.15
CD46-208ENST00000367042 ABCB8Q9NUT2 735 aa7.88□□□□□ -1.15
CD46-208ENST00000367042 FAM120CQ9NX05 1096 aaKnown RBP7.88□□□□□ -1.15
CD46-208ENST00000367042 NDUFAF4Q9P032 175 aa7.88□□□□□ -1.15
CD46-208ENST00000367042 MBD1Q9UIS9 605 aaPredicted RBP7.88□□□□□ -1.15
CD46-208ENST00000367042 RUVBL1Q9Y265 456 aaKnown RBP7.88□□□□□ -1.15
CD46-208ENST00000367042 Q9Y3F1 56 aa7.88□□□□□ -1.15
CD46-208ENST00000367042 ARHGAP33O14559 1287 aa7.87□□□□□ -1.15
CD46-208ENST00000367042 MYL12BO14950 172 aa7.87□□□□□ -1.15
CD46-208ENST00000367042 SLITRK5O94991 958 aa7.87□□□□□ -1.15
CD46-208ENST00000367042 CD160O95971 181 aa7.87□□□□□ -1.15
CD46-208ENST00000367042 TGFB1P01137 390 aa7.87□□□□□ -1.15
CD46-208ENST00000367042 GPX2P18283 190 aa7.87□□□□□ -1.15
CD46-208ENST00000367042 CD9P21926 228 aa7.87□□□□□ -1.15
CD46-208ENST00000367042 PAX3P23760 479 aa7.87□□□□□ -1.15
CD46-208ENST00000367042 HNF4AP41235 474 aa7.87□□□□□ -1.15
CD46-208ENST00000367042 PREPP48147 710 aa7.87□□□□□ -1.15
CD46-208ENST00000367042 AP1S1P61966 158 aa7.87□□□□□ -1.15
CD46-208ENST00000367042 KCNJ10P78508 379 aa7.87□□□□□ -1.15
CD46-208ENST00000367042 MC1RQ01726 317 aa7.87□□□□□ -1.15
CD46-208ENST00000367042 MEF2AQ02078 507 aaPredicted RBP7.87□□□□□ -1.15
CD46-208ENST00000367042 DSC1Q08554 894 aa7.87□□□□□ -1.15
CD46-208ENST00000367042 DOC2AQ14183 400 aa7.87□□□□□ -1.15
CD46-208ENST00000367042 PTGES3Q15185 160 aaKnown RBP7.87□□□□□ -1.15
CD46-208ENST00000367042 FBXO43Q4G163 708 aa7.87□□□□□ -1.15
CD46-208ENST00000367042 LIPKQ5VXJ0 399 aa7.87□□□□□ -1.15
CD46-208ENST00000367042 CASP12Q6UXS9 341 aa7.87□□□□□ -1.15
CD46-208ENST00000367042 DEF8Q6ZN54 512 aa7.87□□□□□ -1.15
CD46-208ENST00000367042 BCDIN3DQ7Z5W3 292 aaKnown RBP7.87□□□□□ -1.15
CD46-208ENST00000367042 RNF130Q86XS8 419 aa7.87□□□□□ -1.15
CD46-208ENST00000367042 LAX1Q8IWV1 398 aa7.87□□□□□ -1.15
CD46-208ENST00000367042 LILRB4Q8NHJ6 448 aa7.87□□□□□ -1.15
CD46-208ENST00000367042 ENKURQ8TC29 256 aa7.87□□□□□ -1.15
CD46-208ENST00000367042 FBLIM1Q8WUP2 373 aa7.87□□□□□ -1.15
CD46-208ENST00000367042 POP5Q969H6 163 aaKnown RBP7.87□□□□□ -1.15
CD46-208ENST00000367042 TMCO6Q96DC7 493 aa7.87□□□□□ -1.15
CD46-208ENST00000367042 SMAD5Q99717 465 aaKnown RBP7.87□□□□□ -1.15
CD46-208ENST00000367042 SMURF1Q9HCE7 757 aa7.87□□□□□ -1.15
CD46-208ENST00000367042 ZDHHC3Q9NYG2 299 aa7.87□□□□□ -1.15
CD46-208ENST00000367042 NUFIP1Q9UHK0 495 aaKnown RBP7.87□□□□□ -1.15
CD46-208ENST00000367042 TMCC3Q9ULS5 477 aa7.87□□□□□ -1.15
CD46-208ENST00000367042 ZNF197O14709 1029 aa7.87□□□□□ -1.15
CD46-208ENST00000367042 AOC2O75106 756 aa7.87□□□□□ -1.15
CD46-208ENST00000367042 CPNE3O75131 537 aaKnown RBP7.87□□□□□ -1.15
CD46-208ENST00000367042 TSPAN19P0C672 248 aa7.87□□□□□ -1.15
CD46-208ENST00000367042 ELNP15502 786 aa7.87□□□□□ -1.15
CD46-208ENST00000367042 TIE1P35590 1138 aa7.87□□□□□ -1.15
CD46-208ENST00000367042 RPS26P62854 115 aaKnown RBP7.87□□□□□ -1.15
CD46-208ENST00000367042 SELENOWP63302 87 aa7.87□□□□□ -1.15
CD46-208ENST00000367042 PRKCDQ05655 676 aa7.87□□□□□ -1.15
CD46-208ENST00000367042 VEPH1Q14D04 833 aa7.87□□□□□ -1.15
CD46-208ENST00000367042 GCNT6Q5T4J0 391 aa7.87□□□□□ -1.15
CD46-208ENST00000367042 TXNDC8Q6A555 127 aa7.87□□□□□ -1.15
CD46-208ENST00000367042 TNFAIP8L2Q6P589 184 aaPredicted RBP7.87□□□□□ -1.15
CD46-208ENST00000367042 HMGN2P46Q86SG4 172 aa7.87□□□□□ -1.15
CD46-208ENST00000367042 THOC6Q86W42 341 aaKnown RBP7.87□□□□□ -1.15
CD46-208ENST00000367042 KRT73Q86Y46 540 aa7.87□□□□□ -1.15
CD46-208ENST00000367042 SREK1IP1Q8N9Q2 155 aaPredicted RBP7.87□□□□□ -1.15
CD46-208ENST00000367042 CIDECQ96AQ7 238 aaPredicted RBP7.87□□□□□ -1.15
CD46-208ENST00000367042 TMEM159Q96B96 161 aa7.87□□□□□ -1.15
CD46-208ENST00000367042 OTULINQ96BN8 352 aa7.87□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 124 ms