RNA–Protein interactions for RNA: ENST00000366813.1

H3F3A-201, Transcript of H3 histone family member 3A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene H3F3A, Length 1,308 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3A-201ENST00000366813 PNLDC1Q8NA58 520 aaKnown RBP6.91□□□□□ -1.3
H3F3A-201ENST00000366813 DCAF4L2Q8NA75 395 aa6.91□□□□□ -1.3
H3F3A-201ENST00000366813 MR1Q95460 341 aa6.91□□□□□ -1.3
H3F3A-201ENST00000366813 ZBTB9Q96C00 473 aa6.91□□□□□ -1.3
H3F3A-201ENST00000366813 C9orf72Q96LT7 481 aa6.91□□□□□ -1.3
H3F3A-201ENST00000366813 PDE7BQ9NP56 450 aa6.91□□□□□ -1.3
H3F3A-201ENST00000366813 CISHQ9NSE2 258 aa6.91□□□□□ -1.3
H3F3A-201ENST00000366813 SIRT4Q9Y6E7 314 aaPredicted RBP6.91□□□□□ -1.3
H3F3A-201ENST00000366813 SYNJ2BP-COX16A0A087WUM0 186 aa6.9□□□□□ -1.3
H3F3A-201ENST00000366813 CCDC189A1A4V9 331 aa6.9□□□□□ -1.3
H3F3A-201ENST00000366813 AGAP5A6NIR3 686 aa6.9□□□□□ -1.3
H3F3A-201ENST00000366813 C3orf70A6NLC5 250 aaPredicted RBP6.9□□□□□ -1.3
H3F3A-201ENST00000366813 INAFM1C9JVW0 142 aa6.9□□□□□ -1.3
H3F3A-201ENST00000366813 KCNAB3O43448 404 aa6.9□□□□□ -1.3
H3F3A-201ENST00000366813 ZMPSTE24O75844 475 aa6.9□□□□□ -1.3
H3F3A-201ENST00000366813 EML2O95834 649 aa6.9□□□□□ -1.3
H3F3A-201ENST00000366813 TRUB2O95900 331 aaKnown RBP6.9□□□□□ -1.3
H3F3A-201ENST00000366813 ANKRD34CP0C6C1 535 aa6.9□□□□□ -1.3
H3F3A-201ENST00000366813 ACTR1BP42025 376 aa6.9□□□□□ -1.3
H3F3A-201ENST00000366813 TSFMP43897 325 aaKnown RBP6.9□□□□□ -1.3
H3F3A-201ENST00000366813 FASLGP48023 281 aa6.9□□□□□ -1.3
H3F3A-201ENST00000366813 ZNF84P51523 738 aa6.9□□□□□ -1.3
H3F3A-201ENST00000366813 TDGF1P3P51864 188 aa6.9□□□□□ -1.3
H3F3A-201ENST00000366813 CDH4P55283 916 aa6.9□□□□□ -1.3
H3F3A-201ENST00000366813 ACTR1AP61163 376 aa6.9□□□□□ -1.3
H3F3A-201ENST00000366813 ARF5P84085 180 aa6.9□□□□□ -1.3
H3F3A-201ENST00000366813 MYLK3Q32MK0 819 aa6.9□□□□□ -1.3
H3F3A-201ENST00000366813 RILPL1Q5EBL4 403 aa6.9□□□□□ -1.3
H3F3A-201ENST00000366813 CEP78Q5JTW2 689 aa6.9□□□□□ -1.3
H3F3A-201ENST00000366813 C1orf220Q5T0J3 134 aa6.9□□□□□ -1.3
H3F3A-201ENST00000366813 CHCHD2P9Q5T1J5 151 aaPredicted RBP6.9□□□□□ -1.3
H3F3A-201ENST00000366813 LCN10Q6JVE6 187 aa6.9□□□□□ -1.3
H3F3A-201ENST00000366813 TMEM207Q6UWW9 146 aa6.9□□□□□ -1.3
H3F3A-201ENST00000366813 ENDOVQ8N8Q3 282 aaKnown RBP6.9□□□□□ -1.3
H3F3A-201ENST00000366813 SRFBP1Q8NEF9 429 aaKnown RBP6.9□□□□□ -1.3
H3F3A-201ENST00000366813 TAS1R2Q8TE23 839 aa6.9□□□□□ -1.3
H3F3A-201ENST00000366813 TM9SF4Q92544 642 aa6.9□□□□□ -1.3
H3F3A-201ENST00000366813 FAM149B1Q96BN6 582 aa6.9□□□□□ -1.3
H3F3A-201ENST00000366813 ZNF845Q96IR2 970 aaPredicted RBP6.9□□□□□ -1.3
H3F3A-201ENST00000366813 UBXN10Q96LJ8 280 aa6.9□□□□□ -1.3
H3F3A-201ENST00000366813 TREX2Q9BQ50 279 aaPredicted RBP6.9□□□□□ -1.3
H3F3A-201ENST00000366813 WDR77Q9BQA1 342 aaPredicted RBP6.9□□□□□ -1.3
H3F3A-201ENST00000366813 TBC1D10AQ9BXI6 508 aa6.9□□□□□ -1.3
H3F3A-201ENST00000366813 TRNAU1APQ9NX07 287 aaKnown RBP6.9□□□□□ -1.3
H3F3A-201ENST00000366813 COX16Q9P0S2 106 aa6.9□□□□□ -1.3
H3F3A-201ENST00000366813 SLC12A6Q9UHW9 1150 aa6.9□□□□□ -1.3
H3F3A-201ENST00000366813 SNX7Q9UNH6 387 aa6.9□□□□□ -1.3
H3F3A-201ENST00000366813 PLEKHA6Q9Y2H5 1048 aa6.9□□□□□ -1.3
H3F3A-201ENST00000366813 ANKRD36A6QL64 1941 aa6.9□□□□□ -1.31
H3F3A-201ENST00000366813 EIF3FO00303 357 aaPredicted RBP6.89□□□□□ -1.31
H3F3A-201ENST00000366813 KIF1CO43896 1103 aaKnown RBP6.89□□□□□ -1.31
H3F3A-201ENST00000366813 CD160O95971 181 aa6.89□□□□□ -1.31
H3F3A-201ENST00000366813 ALDOAP04075 364 aaKnown RBP6.89□□□□□ -1.31
H3F3A-201ENST00000366813 TUBB4AP04350 444 aa6.89□□□□□ -1.31
H3F3A-201ENST00000366813 CYP2A6P11509 494 aaPredicted RBP6.89□□□□□ -1.31
H3F3A-201ENST00000366813 AGAP20933 346 aa6.89□□□□□ -1.31
H3F3A-201ENST00000366813 LONP1P36776 959 aaKnown RBP6.89□□□□□ -1.31
H3F3A-201ENST00000366813 POLD2P49005 469 aa6.89□□□□□ -1.31
H3F3A-201ENST00000366813 VPS41P49754 854 aa6.89□□□□□ -1.31
H3F3A-201ENST00000366813 PAPOLAP51003 745 aaKnown RBP6.89□□□□□ -1.31
H3F3A-201ENST00000366813 SMSP52788 366 aa6.89□□□□□ -1.31
H3F3A-201ENST00000366813 PDCLQ13371 301 aa6.89□□□□□ -1.31
H3F3A-201ENST00000366813 ZNF324BQ6AW86 544 aaPredicted RBP6.89□□□□□ -1.31
H3F3A-201ENST00000366813 RETSATQ6NUM9 610 aa6.89□□□□□ -1.31
H3F3A-201ENST00000366813 GDPD4Q6W3E5 623 aa6.89□□□□□ -1.31
H3F3A-201ENST00000366813 NCCRP1Q6ZVX7 275 aaPredicted RBP6.89□□□□□ -1.31
H3F3A-201ENST00000366813 TFAP2DQ7Z6R9 452 aa6.89□□□□□ -1.31
H3F3A-201ENST00000366813 CCDC65Q8IXS2 484 aa6.89□□□□□ -1.31
H3F3A-201ENST00000366813 GALNT16Q8N428 558 aa6.89□□□□□ -1.31
H3F3A-201ENST00000366813 BCORP1Q8N888 145 aa6.89□□□□□ -1.31
H3F3A-201ENST00000366813 FAM184AQ8NB25 1140 aa6.89□□□□□ -1.31
H3F3A-201ENST00000366813 SLC35F5Q8WV83 523 aa6.89□□□□□ -1.31
H3F3A-201ENST00000366813 HMCESQ96FZ2 354 aa6.89□□□□□ -1.31
H3F3A-201ENST00000366813 CNDP1Q96KN2 507 aa6.89□□□□□ -1.31
H3F3A-201ENST00000366813 TGM7Q96PF1 710 aa6.89□□□□□ -1.31
H3F3A-201ENST00000366813 NPAS1Q99742 590 aa6.89□□□□□ -1.31
H3F3A-201ENST00000366813 PANK2Q9BZ23 570 aa6.89□□□□□ -1.31
H3F3A-201ENST00000366813 NUAK2Q9H093 628 aa6.89□□□□□ -1.31
H3F3A-201ENST00000366813 CHODLQ9H9P2 273 aa6.89□□□□□ -1.31
H3F3A-201ENST00000366813 ASNSD1Q9NWL6 643 aa6.89□□□□□ -1.31
H3F3A-201ENST00000366813 BAG5Q9UL15 447 aa6.89□□□□□ -1.31
H3F3A-201ENST00000366813 SUFUQ9UMX1 484 aa6.89□□□□□ -1.31
H3F3A-201ENST00000366813 RCE1Q9Y256 329 aa6.89□□□□□ -1.31
H3F3A-201ENST00000366813 SNX10Q9Y5X0 201 aa6.89□□□□□ -1.31
H3F3A-201ENST00000366813 NCOA6Q14686 2063 aaPredicted RBP6.89□□□□□ -1.31
H3F3A-201ENST00000366813 PKD1L1Q8TDX9 2849 aa6.89□□□□□ -1.31
H3F3A-201ENST00000366813 O00370 1275 aa6.88□□□□□ -1.31
H3F3A-201ENST00000366813 RECQL5O94762 991 aaPredicted RBP6.88□□□□□ -1.31
H3F3A-201ENST00000366813 SIX3O95343 332 aaPredicted RBP6.88□□□□□ -1.31
H3F3A-201ENST00000366813 POP4O95707 220 aaKnown RBP6.88□□□□□ -1.31
H3F3A-201ENST00000366813 IGLV3-25P01717 112 aa6.88□□□□□ -1.31
H3F3A-201ENST00000366813 HOXC4P09017 264 aaPredicted RBP6.88□□□□□ -1.31
H3F3A-201ENST00000366813 TRIM23P36406 574 aa6.88□□□□□ -1.31
H3F3A-201ENST00000366813 GCLMP48507 274 aa6.88□□□□□ -1.31
H3F3A-201ENST00000366813 PDE1BQ01064 536 aa6.88□□□□□ -1.31
H3F3A-201ENST00000366813 SLC20A2Q08357 652 aa6.88□□□□□ -1.31
H3F3A-201ENST00000366813 GPS2Q13227 327 aa6.88□□□□□ -1.31
H3F3A-201ENST00000366813 EIF4EBP2Q13542 120 aaPredicted RBP6.88□□□□□ -1.31
H3F3A-201ENST00000366813 KPNB1Q14974 876 aaKnown RBP6.88□□□□□ -1.31
H3F3A-201ENST00000366813 LEKR1Q6ZMV7 388 aa6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms