RNA–Protein interactions for RNA: ENST00000366304.3

HMGB1P39-201, Transcript of high mobility group box 1 pseudogene 39, humanhuman

BASIC

Gene HMGB1P39, Length 880 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P39-201ENST00000366304 EZRP15311 586 aaKnown RBP7.88□□□□□ -1.15
HMGB1P39-201ENST00000366304 BMP5P22003 454 aa7.88□□□□□ -1.15
HMGB1P39-201ENST00000366304 MAGEA5P43359 124 aa7.88□□□□□ -1.15
HMGB1P39-201ENST00000366304 AVPR1BP47901 424 aa7.88□□□□□ -1.15
HMGB1P39-201ENST00000366304 TAS2R50P59544 299 aa7.88□□□□□ -1.15
HMGB1P39-201ENST00000366304 BTG2P78543 158 aa7.88□□□□□ -1.15
HMGB1P39-201ENST00000366304 CAPRIN1Q14444 709 aaKnown RBP7.88□□□□□ -1.15
HMGB1P39-201ENST00000366304 XKR6Q5GH73 641 aa7.88□□□□□ -1.15
HMGB1P39-201ENST00000366304 RIPPLY2Q5TAB7 128 aa7.88□□□□□ -1.15
HMGB1P39-201ENST00000366304 YTHDF3Q7Z739 585 aaKnown RBP7.88□□□□□ -1.15
HMGB1P39-201ENST00000366304 CYP4Z2PQ8N1L4 340 aa7.88□□□□□ -1.15
HMGB1P39-201ENST00000366304 TMEM251Q8N6I4 163 aa7.88□□□□□ -1.15
HMGB1P39-201ENST00000366304 KCT2Q8NC54 265 aa7.88□□□□□ -1.15
HMGB1P39-201ENST00000366304 TNIP2Q8NFZ5 429 aa7.88□□□□□ -1.15
HMGB1P39-201ENST00000366304 OR2M7Q8NG81 312 aa7.88□□□□□ -1.15
HMGB1P39-201ENST00000366304 PPP1R14CQ8TAE6 165 aa7.88□□□□□ -1.15
HMGB1P39-201ENST00000366304 STYXQ8WUJ0 223 aa7.88□□□□□ -1.15
HMGB1P39-201ENST00000366304 SREK1Q8WXA9 508 aaKnown RBP7.88□□□□□ -1.15
HMGB1P39-201ENST00000366304 SYN2Q92777 582 aaPredicted RBP7.88□□□□□ -1.15
HMGB1P39-201ENST00000366304 PEX11GQ96HA9 241 aa7.88□□□□□ -1.15
HMGB1P39-201ENST00000366304 CAPZA3Q96KX2 299 aa7.88□□□□□ -1.15
HMGB1P39-201ENST00000366304 CARD6Q9BX69 1037 aa7.88□□□□□ -1.15
HMGB1P39-201ENST00000366304 HEMGNQ9BXL5 484 aa7.88□□□□□ -1.15
HMGB1P39-201ENST00000366304 GOLPH3Q9H4A6 298 aa7.88□□□□□ -1.15
HMGB1P39-201ENST00000366304 LIN28AQ9H9Z2 209 aaKnown RBP7.88□□□□□ -1.15
HMGB1P39-201ENST00000366304 SEMA4BQ9NPR2 832 aaPredicted RBP7.88□□□□□ -1.15
HMGB1P39-201ENST00000366304 TAC3Q9UHF0 121 aa7.88□□□□□ -1.15
HMGB1P39-201ENST00000366304 SH2B3Q9UQQ2 575 aa7.88□□□□□ -1.15
HMGB1P39-201ENST00000366304 NPFFR2Q9Y5X5 522 aa7.88□□□□□ -1.15
HMGB1P39-201ENST00000366304 DUSP10Q9Y6W6 482 aa7.88□□□□□ -1.15
HMGB1P39-201ENST00000366304 ARID1AO14497 2285 aa7.87□□□□□ -1.15
HMGB1P39-201ENST00000366304 MPDZO75970 2070 aa7.87□□□□□ -1.15
HMGB1P39-201ENST00000366304 OR14I1A6ND48 311 aa7.87□□□□□ -1.15
HMGB1P39-201ENST00000366304 MBD3L4A6NDZ8 208 aaPredicted RBP7.87□□□□□ -1.15
HMGB1P39-201ENST00000366304 TUBAL3A6NHL2 446 aa7.87□□□□□ -1.15
HMGB1P39-201ENST00000366304 MBD3L5A6NJ08 208 aaPredicted RBP7.87□□□□□ -1.15
HMGB1P39-201ENST00000366304 HACD1B0YJ81 288 aa7.87□□□□□ -1.15
HMGB1P39-201ENST00000366304 BCKDKO14874 412 aa7.87□□□□□ -1.15
HMGB1P39-201ENST00000366304 ARHGEF9O43307 516 aa7.87□□□□□ -1.15
HMGB1P39-201ENST00000366304 PHF2O75151 1096 aa7.87□□□□□ -1.15
HMGB1P39-201ENST00000366304 VPS26AO75436 327 aa7.87□□□□□ -1.15
HMGB1P39-201ENST00000366304 OR6B1O95007 311 aa7.87□□□□□ -1.15
HMGB1P39-201ENST00000366304 METTL18O95568 372 aa7.87□□□□□ -1.15
HMGB1P39-201ENST00000366304 H2AFZP0C0S5 128 aa7.87□□□□□ -1.15
HMGB1P39-201ENST00000366304 MAOAP21397 527 aa7.87□□□□□ -1.15
HMGB1P39-201ENST00000366304 COMTP21964 271 aa7.87□□□□□ -1.15
HMGB1P39-201ENST00000366304 ASCL1P50553 236 aa7.87□□□□□ -1.15
HMGB1P39-201ENST00000366304 OLR1P78380 273 aa7.87□□□□□ -1.15
HMGB1P39-201ENST00000366304 MPP1Q00013 466 aa7.87□□□□□ -1.15
HMGB1P39-201ENST00000366304 PRDX1Q06830 199 aaKnown RBP7.87□□□□□ -1.15
HMGB1P39-201ENST00000366304 FOXO1Q12778 655 aa7.87□□□□□ -1.15
HMGB1P39-201ENST00000366304 HYAL2Q12891 473 aa7.87□□□□□ -1.15
HMGB1P39-201ENST00000366304 TFDP2Q14188 446 aa7.87□□□□□ -1.15
HMGB1P39-201ENST00000366304 NR1I3Q14994 352 aa7.87□□□□□ -1.15
HMGB1P39-201ENST00000366304 ASTE1Q2TB18 679 aaPredicted RBP7.87□□□□□ -1.15
HMGB1P39-201ENST00000366304 ARSJQ5FYB0 599 aaPredicted RBP7.87□□□□□ -1.15
HMGB1P39-201ENST00000366304 FBXW10Q5XX13 1052 aa7.87□□□□□ -1.15
HMGB1P39-201ENST00000366304 ICE2Q659A1 982 aa7.87□□□□□ -1.15
HMGB1P39-201ENST00000366304 ITPRIPL1Q6GPH6 555 aa7.87□□□□□ -1.15
HMGB1P39-201ENST00000366304 H2AFVQ71UI9 128 aa7.87□□□□□ -1.15
HMGB1P39-201ENST00000366304 BZW1Q7L1Q6 419 aaKnown RBP7.87□□□□□ -1.15
HMGB1P39-201ENST00000366304 P3H2Q8IVL5 708 aa7.87□□□□□ -1.15
HMGB1P39-201ENST00000366304 LRRC56Q8IYG6 542 aaPredicted RBP7.87□□□□□ -1.15
HMGB1P39-201ENST00000366304 ULK2Q8IYT8 1036 aa7.87□□□□□ -1.15
HMGB1P39-201ENST00000366304 LRRC75A-AS1Q8N1F1 130 aa7.87□□□□□ -1.15
HMGB1P39-201ENST00000366304 APCDD1LQ8NCL9 501 aa7.87□□□□□ -1.15
HMGB1P39-201ENST00000366304 PSD4Q8NDX1 1056 aa7.87□□□□□ -1.15
HMGB1P39-201ENST00000366304 ZCCHC10Q8TBK6 192 aa7.87□□□□□ -1.15
HMGB1P39-201ENST00000366304 CREB3L4Q8TEY5 395 aa7.87□□□□□ -1.15
HMGB1P39-201ENST00000366304 RERGQ96A58 199 aaPredicted RBP7.87□□□□□ -1.15
HMGB1P39-201ENST00000366304 BDH2Q9BUT1 245 aa7.87□□□□□ -1.15
HMGB1P39-201ENST00000366304 GALPQ9UBC7 116 aa7.87□□□□□ -1.15
HMGB1P39-201ENST00000366304 AAR2Q9Y312 384 aaKnown RBP7.87□□□□□ -1.15
HMGB1P39-201ENST00000366304 NAALAD2Q9Y3Q0 740 aa7.87□□□□□ -1.15
HMGB1P39-201ENST00000366304 BZW2Q9Y6E2 419 aaKnown RBP7.87□□□□□ -1.15
HMGB1P39-201ENST00000366304 KIAA1549Q9HCM3 1950 aa7.86□□□□□ -1.15
HMGB1P39-201ENST00000366304 IGKV3D-11A0A0A0MRZ8 115 aa7.86□□□□□ -1.15
HMGB1P39-201ENST00000366304 ATP6AP2A0A1C7CYW4 349 aa7.86□□□□□ -1.15
HMGB1P39-201ENST00000366304 SAGE2PA6NJ88 616 aa7.86□□□□□ -1.15
HMGB1P39-201ENST00000366304 A8MUA0 341 aa7.86□□□□□ -1.15
HMGB1P39-201ENST00000366304 H7BY64 318 aa7.86□□□□□ -1.15
HMGB1P39-201ENST00000366304 H7C0C1 242 aa7.86□□□□□ -1.15
HMGB1P39-201ENST00000366304 MYO1CO00159 1063 aa7.86□□□□□ -1.15
HMGB1P39-201ENST00000366304 CLDN4O14493 209 aa7.86□□□□□ -1.15
HMGB1P39-201ENST00000366304 AQP7O14520 342 aa7.86□□□□□ -1.15
HMGB1P39-201ENST00000366304 ZNF354AO60765 605 aaPredicted RBP7.86□□□□□ -1.15
HMGB1P39-201ENST00000366304 SMPD2O60906 423 aa7.86□□□□□ -1.15
HMGB1P39-201ENST00000366304 ITGA10O75578 1167 aa7.86□□□□□ -1.15
HMGB1P39-201ENST00000366304 ATP6AP2O75787 350 aa7.86□□□□□ -1.15
HMGB1P39-201ENST00000366304 MATN4O95460 622 aa7.86□□□□□ -1.15
HMGB1P39-201ENST00000366304 TUBB4AP04350 444 aa7.86□□□□□ -1.15
HMGB1P39-201ENST00000366304 APOA4P06727 396 aa7.86□□□□□ -1.15
HMGB1P39-201ENST00000366304 CEACAM8P31997 349 aaPredicted RBP7.86□□□□□ -1.15
HMGB1P39-201ENST00000366304 RPA3P35244 121 aaPredicted RBP7.86□□□□□ -1.15
HMGB1P39-201ENST00000366304 COILP38432 576 aaPredicted RBP7.86□□□□□ -1.15
HMGB1P39-201ENST00000366304 ATP5OP48047 213 aa7.86□□□□□ -1.15
HMGB1P39-201ENST00000366304 AGFG1P52594 562 aaKnown RBP7.86□□□□□ -1.15
HMGB1P39-201ENST00000366304 ZNF136P52737 540 aa7.86□□□□□ -1.15
HMGB1P39-201ENST00000366304 PLGLB1Q02325 96 aa7.86□□□□□ -1.15
HMGB1P39-201ENST00000366304 RELAQ04206 551 aa7.86□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms