RNA–Protein interactions for RNA: ENST00000365375.1

RNU6-728P-201, Transcript of RNA, U6 small nuclear 728, pseudogene, humanhuman

BASIC

Gene RNU6-728P, Length 104 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-728P-201ENST00000365375 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP0.81□□□□□ -2.28
RNU6-728P-201ENST00000365375 KLK12Q9UKR0 248 aa0.81□□□□□ -2.28
RNU6-728P-201ENST00000365375 IL16Q14005 1332 aa0.81□□□□□ -2.28
RNU6-728P-201ENST00000365375 RNF123Q5XPI4 1314 aa0.81□□□□□ -2.28
RNU6-728P-201ENST00000365375 PTCH1Q13635 1447 aa0.81□□□□□ -2.28
RNU6-728P-201ENST00000365375 TRAV24A0A0B4J272 114 aa0.8□□□□□ -2.28
RNU6-728P-201ENST00000365375 TEX48A0A1B0GUV7 120 aa0.8□□□□□ -2.28
RNU6-728P-201ENST00000365375 FSD2A1L4K1 749 aa0.8□□□□□ -2.28
RNU6-728P-201ENST00000365375 BCLAF3A2AJT9 711 aaKnown RBP0.8□□□□□ -2.28
RNU6-728P-201ENST00000365375 FOXI3A8MTJ6 420 aaPredicted RBP0.8□□□□□ -2.28
RNU6-728P-201ENST00000365375 B4DLN1 442 aa0.8□□□□□ -2.28
RNU6-728P-201ENST00000365375 TRIM77I1YAP6 450 aa0.8□□□□□ -2.28
RNU6-728P-201ENST00000365375 SIGLEC5O15389 551 aa0.8□□□□□ -2.28
RNU6-728P-201ENST00000365375 PTP4A3O75365 173 aa0.8□□□□□ -2.28
RNU6-728P-201ENST00000365375 STAM2O75886 525 aa0.8□□□□□ -2.28
RNU6-728P-201ENST00000365375 WISP3O95389 354 aaPredicted RBP0.8□□□□□ -2.28
RNU6-728P-201ENST00000365375 LINGO3P0C6S8 592 aa0.8□□□□□ -2.28
RNU6-728P-201ENST00000365375 SAGP10523 405 aaPredicted RBP0.8□□□□□ -2.28
RNU6-728P-201ENST00000365375 MRPL12P52815 198 aaKnown RBP0.8□□□□□ -2.28
RNU6-728P-201ENST00000365375 STX17P56962 302 aa0.8□□□□□ -2.28
RNU6-728P-201ENST00000365375 POLR2LP62875 67 aaKnown RBP0.8□□□□□ -2.28
RNU6-728P-201ENST00000365375 GNB2P62879 340 aa0.8□□□□□ -2.28
RNU6-728P-201ENST00000365375 KRT32Q14532 448 aa0.8□□□□□ -2.28
RNU6-728P-201ENST00000365375 NONOQ15233 471 aaKnown RBP eCLIP0.8□□□□□ -2.28
RNU6-728P-201ENST00000365375 GSG1Q2KHT4 349 aa0.8□□□□□ -2.28
RNU6-728P-201ENST00000365375 VWC2Q2TAL6 325 aa0.8□□□□□ -2.28
RNU6-728P-201ENST00000365375 CBWD6Q4V339 395 aa0.8□□□□□ -2.28
RNU6-728P-201ENST00000365375 FGD3Q5JSP0 725 aa0.8□□□□□ -2.28
RNU6-728P-201ENST00000365375 CBWD3Q5JTY5 395 aa0.8□□□□□ -2.28
RNU6-728P-201ENST00000365375 IRGCQ6NXR0 463 aa0.8□□□□□ -2.28
RNU6-728P-201ENST00000365375 ARMCX5Q6P1M9 558 aa0.8□□□□□ -2.28
RNU6-728P-201ENST00000365375 ANKRD33Q7Z3H0 272 aa0.8□□□□□ -2.28
RNU6-728P-201ENST00000365375 FBXO16Q8IX29 292 aaPredicted RBP0.8□□□□□ -2.28
RNU6-728P-201ENST00000365375 SMAP1Q8IYB5 467 aaPredicted RBP0.8□□□□□ -2.28
RNU6-728P-201ENST00000365375 CEND1Q8N111 149 aa0.8□□□□□ -2.28
RNU6-728P-201ENST00000365375 BANPQ8N9N5 519 aa0.8□□□□□ -2.28
RNU6-728P-201ENST00000365375 ZNRF1Q8ND25 227 aa0.8□□□□□ -2.28
RNU6-728P-201ENST00000365375 OR6F1Q8NGZ6 308 aa0.8□□□□□ -2.28
RNU6-728P-201ENST00000365375 SNRNP27Q8WVK2 155 aaKnown RBP0.8□□□□□ -2.28
RNU6-728P-201ENST00000365375 ATL1Q8WXF7 558 aa0.8□□□□□ -2.28
RNU6-728P-201ENST00000365375 ELSPBP1Q96BH3 223 aa0.8□□□□□ -2.28
RNU6-728P-201ENST00000365375 NTNG2Q96CW9 530 aa0.8□□□□□ -2.28
RNU6-728P-201ENST00000365375 PPM1MQ96MI6 270 aa0.8□□□□□ -2.28
RNU6-728P-201ENST00000365375 ALKBH3Q96Q83 286 aaPredicted RBP0.8□□□□□ -2.28
RNU6-728P-201ENST00000365375 IL12RB2Q99665 862 aa0.8□□□□□ -2.28
RNU6-728P-201ENST00000365375 SLC26A6Q9BXS9 759 aa0.8□□□□□ -2.28
RNU6-728P-201ENST00000365375 PNNQ9H307 717 aaKnown RBP0.8□□□□□ -2.28
RNU6-728P-201ENST00000365375 SMARCAD1Q9H4L7 1026 aa0.8□□□□□ -2.28
RNU6-728P-201ENST00000365375 ISG20L2Q9H9L3 353 aaKnown RBP0.8□□□□□ -2.28
RNU6-728P-201ENST00000365375 C9orf78Q9NZ63 289 aaPredicted RBP0.8□□□□□ -2.28
RNU6-728P-201ENST00000365375 TMEM9Q9P0T7 183 aa0.8□□□□□ -2.28
RNU6-728P-201ENST00000365375 POLKQ9UBT6 870 aa0.8□□□□□ -2.28
RNU6-728P-201ENST00000365375 AASSQ9UDR5 926 aa0.8□□□□□ -2.28
RNU6-728P-201ENST00000365375 PTRH2Q9Y3E5 179 aaKnown RBP0.8□□□□□ -2.28
RNU6-728P-201ENST00000365375 CPQQ9Y646 472 aa0.8□□□□□ -2.28
RNU6-728P-201ENST00000365375 ZFP37Q9Y6Q3 630 aaPredicted RBP0.8□□□□□ -2.28
RNU6-728P-201ENST00000365375 GAKO14976 1311 aa0.8□□□□□ -2.28
RNU6-728P-201ENST00000365375 LTBP1Q14766 1721 aa0.79□□□□□ -2.28
RNU6-728P-201ENST00000365375 A0A087X0M5 115 aa0.79□□□□□ -2.28
RNU6-728P-201ENST00000365375 A0A1B0GX30 115 aa0.79□□□□□ -2.28
RNU6-728P-201ENST00000365375 LOC390937A0A1W2PQ73 354 aa0.79□□□□□ -2.28
RNU6-728P-201ENST00000365375 PI4KAP2A4QPH2 592 aa0.79□□□□□ -2.28
RNU6-728P-201ENST00000365375 FAM231BA6NCW3 169 aa0.79□□□□□ -2.28
RNU6-728P-201ENST00000365375 IGLON5A6NGN9 336 aa0.79□□□□□ -2.28
RNU6-728P-201ENST00000365375 ZFP92A6NM28 416 aa0.79□□□□□ -2.28
RNU6-728P-201ENST00000365375 AGAP14A8MT82 685 aa0.79□□□□□ -2.28
RNU6-728P-201ENST00000365375 A8MVM7 634 aa0.79□□□□□ -2.28
RNU6-728P-201ENST00000365375 C17orf105B2RV13 164 aa0.79□□□□□ -2.28
RNU6-728P-201ENST00000365375 B4DXG7 233 aa0.79□□□□□ -2.28
RNU6-728P-201ENST00000365375 PTGES3LE9PB15 166 aa0.79□□□□□ -2.28
RNU6-728P-201ENST00000365375 LMO7DNF2Z398 122 aa0.79□□□□□ -2.28
RNU6-728P-201ENST00000365375 FRAT2O75474 233 aaPredicted RBP0.79□□□□□ -2.28
RNU6-728P-201ENST00000365375 RHBDL1O75783 438 aa0.79□□□□□ -2.28
RNU6-728P-201ENST00000365375 GSRP00390 522 aa0.79□□□□□ -2.28
RNU6-728P-201ENST00000365375 SERPING1P05155 500 aa0.79□□□□□ -2.28
RNU6-728P-201ENST00000365375 YES1P07947 543 aa0.79□□□□□ -2.28
RNU6-728P-201ENST00000365375 CPN1P15169 458 aa0.79□□□□□ -2.28
RNU6-728P-201ENST00000365375 PFKFB1P16118 471 aa0.79□□□□□ -2.28
RNU6-728P-201ENST00000365375 CYP11B2P19099 503 aa0.79□□□□□ -2.28
RNU6-728P-201ENST00000365375 GDF1P27539 372 aa0.79□□□□□ -2.28
RNU6-728P-201ENST00000365375 MAN1A1P33908 653 aa0.79□□□□□ -2.28
RNU6-728P-201ENST00000365375 SPRP35270 261 aaPredicted RBP0.79□□□□□ -2.28
RNU6-728P-201ENST00000365375 FEN1P39748 380 aaKnown RBP0.79□□□□□ -2.28
RNU6-728P-201ENST00000365375 NRIP1P48552 1158 aa0.79□□□□□ -2.28
RNU6-728P-201ENST00000365375 EFNA3P52797 238 aa0.79□□□□□ -2.28
RNU6-728P-201ENST00000365375 HMGCS2P54868 508 aa0.79□□□□□ -2.28
RNU6-728P-201ENST00000365375 CXCL6P80162 114 aa0.79□□□□□ -2.28
RNU6-728P-201ENST00000365375 MPP1Q00013 466 aa0.79□□□□□ -2.28
RNU6-728P-201ENST00000365375 GCKRQ14397 625 aa0.79□□□□□ -2.28
RNU6-728P-201ENST00000365375 PLEKHS1Q5SXH7 462 aa0.79□□□□□ -2.28
RNU6-728P-201ENST00000365375 SUSD4Q5VX71 490 aa0.79□□□□□ -2.28
RNU6-728P-201ENST00000365375 Q6ZVQ6 151 aa0.79□□□□□ -2.28
RNU6-728P-201ENST00000365375 KRTAP13-1Q8IUC0 172 aa0.79□□□□□ -2.28
RNU6-728P-201ENST00000365375 H1FOOQ8IZA3 346 aaPredicted RBP0.79□□□□□ -2.28
RNU6-728P-201ENST00000365375 C1orf131Q8NDD1 294 aaKnown RBP0.79□□□□□ -2.28
RNU6-728P-201ENST00000365375 OR2L5Q8NG80 312 aa0.79□□□□□ -2.28
RNU6-728P-201ENST00000365375 OR4C15Q8NGM1 316 aa0.79□□□□□ -2.28
RNU6-728P-201ENST00000365375 CFAP61Q8NHU2 1237 aa0.79□□□□□ -2.28
RNU6-728P-201ENST00000365375 UCMAQ8WVF2 138 aa0.79□□□□□ -2.28
RNU6-728P-201ENST00000365375 SRSF12Q8WXF0 261 aaKnown RBP0.79□□□□□ -2.28
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms