RNA–Protein interactions for RNA: ENST00000362455.1

RNU4-39P-201, Transcript of RNA, U4 small nuclear 39, pseudogene, humanhuman

BASIC

Gene RNU4-39P, Length 127 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-39P-201ENST00000362455 DDX43Q9NXZ2 648 aaKnown RBP5.22□□□□□ -1.57
RNU4-39P-201ENST00000362455 LRWD1Q9UFC0 647 aa5.22□□□□□ -1.57
RNU4-39P-201ENST00000362455 SNX7Q9UNH6 387 aa5.22□□□□□ -1.57
RNU4-39P-201ENST00000362455 KCNK7Q9Y2U2 307 aa5.22□□□□□ -1.57
RNU4-39P-201ENST00000362455 DCHS1Q96JQ0 3298 aa5.22□□□□□ -1.57
RNU4-39P-201ENST00000362455 VPS13AQ96RL7 3174 aa5.22□□□□□ -1.57
RNU4-39P-201ENST00000362455 EVPLQ92817 2033 aa5.21□□□□□ -1.57
RNU4-39P-201ENST00000362455 TULP2O00295 520 aa5.21□□□□□ -1.58
RNU4-39P-201ENST00000362455 CSN3P07498 182 aa5.21□□□□□ -1.58
RNU4-39P-201ENST00000362455 POLR2MP0CAP2 368 aa5.21□□□□□ -1.58
RNU4-39P-201ENST00000362455 ACAT1P24752 427 aaKnown RBP5.21□□□□□ -1.58
RNU4-39P-201ENST00000362455 MARK3P27448 753 aa5.21□□□□□ -1.58
RNU4-39P-201ENST00000362455 TNFRSF8P28908 595 aa5.21□□□□□ -1.58
RNU4-39P-201ENST00000362455 RPS18P62269 152 aaKnown RBP5.21□□□□□ -1.58
RNU4-39P-201ENST00000362455 TUBB4BP68371 445 aa5.21□□□□□ -1.58
RNU4-39P-201ENST00000362455 CX3CL1P78423 397 aa5.21□□□□□ -1.58
RNU4-39P-201ENST00000362455 SP4Q02446 784 aa5.21□□□□□ -1.58
RNU4-39P-201ENST00000362455 SIGLEC14Q08ET2 396 aa5.21□□□□□ -1.58
RNU4-39P-201ENST00000362455 CUL3Q13618 768 aa5.21□□□□□ -1.58
RNU4-39P-201ENST00000362455 NHSL2Q5HYW2 709 aa5.21□□□□□ -1.58
RNU4-39P-201ENST00000362455 SFMBT2Q5VUG0 894 aa5.21□□□□□ -1.58
RNU4-39P-201ENST00000362455 MSANTD1Q6ZTZ1 278 aa5.21□□□□□ -1.58
RNU4-39P-201ENST00000362455 TUBA1AQ71U36 451 aa5.21□□□□□ -1.58
RNU4-39P-201ENST00000362455 SLC9B2Q86UD5 537 aa5.21□□□□□ -1.58
RNU4-39P-201ENST00000362455 SNX32Q86XE0 403 aa5.21□□□□□ -1.58
RNU4-39P-201ENST00000362455 DCP1BQ8IZD4 617 aaKnown RBP5.21□□□□□ -1.58
RNU4-39P-201ENST00000362455 OR13J1Q8NGT2 312 aa5.21□□□□□ -1.58
RNU4-39P-201ENST00000362455 OCC1Q8TAD7 63 aa5.21□□□□□ -1.58
RNU4-39P-201ENST00000362455 C9orf43Q8TAL5 461 aaPredicted RBP5.21□□□□□ -1.58
RNU4-39P-201ENST00000362455 FGFBP3Q8TAT2 258 aa5.21□□□□□ -1.58
RNU4-39P-201ENST00000362455 SORCS1Q8WY21 1168 aa5.21□□□□□ -1.58
RNU4-39P-201ENST00000362455 P2RX5Q93086 422 aa5.21□□□□□ -1.58
RNU4-39P-201ENST00000362455 HES6Q96HZ4 224 aa5.21□□□□□ -1.58
RNU4-39P-201ENST00000362455 RPGRIP1Q96KN7 1286 aa5.21□□□□□ -1.58
RNU4-39P-201ENST00000362455 IL17FQ96PD4 163 aa5.21□□□□□ -1.58
RNU4-39P-201ENST00000362455 TUBA1CQ9BQE3 449 aa5.21□□□□□ -1.58
RNU4-39P-201ENST00000362455 ARRDC1-AS1Q9H2J1 176 aa5.21□□□□□ -1.58
RNU4-39P-201ENST00000362455 RNF41Q9H4P4 317 aaPredicted RBP5.21□□□□□ -1.58
RNU4-39P-201ENST00000362455 CDH20Q9HBT6 801 aa5.21□□□□□ -1.58
RNU4-39P-201ENST00000362455 CD93Q9NPY3 652 aa5.21□□□□□ -1.58
RNU4-39P-201ENST00000362455 OLFML3Q9NRN5 406 aa5.21□□□□□ -1.58
RNU4-39P-201ENST00000362455 SLC38A7Q9NVC3 462 aa5.21□□□□□ -1.58
RNU4-39P-201ENST00000362455 PTTG2Q9NZH5 202 aa5.21□□□□□ -1.58
RNU4-39P-201ENST00000362455 ZNF292O60281 2723 aa5.21□□□□□ -1.58
RNU4-39P-201ENST00000362455 NRCAMQ92823 1304 aa5.21□□□□□ -1.58
RNU4-39P-201ENST00000362455 EPG5Q9HCE0 2579 aa5.2□□□□□ -1.58
RNU4-39P-201ENST00000362455 A0A1W2PRB8 838 aa5.2□□□□□ -1.58
RNU4-39P-201ENST00000362455 PLSCR5A0PG75 271 aa5.2□□□□□ -1.58
RNU4-39P-201ENST00000362455 E9PI62 339 aa5.2□□□□□ -1.58
RNU4-39P-201ENST00000362455 GAPDHSO14556 408 aaPredicted RBP5.2□□□□□ -1.58
RNU4-39P-201ENST00000362455 SYNGR3O43761 229 aa5.2□□□□□ -1.58
RNU4-39P-201ENST00000362455 BAG4O95429 457 aaKnown RBP5.2□□□□□ -1.58
RNU4-39P-201ENST00000362455 PLA2G4BP0C869 781 aa5.2□□□□□ -1.58
RNU4-39P-201ENST00000362455 SAGP10523 405 aaPredicted RBP5.2□□□□□ -1.58
RNU4-39P-201ENST00000362455 HAPLN1P10915 354 aaPredicted RBP5.2□□□□□ -1.58
RNU4-39P-201ENST00000362455 VDRP11473 427 aa5.2□□□□□ -1.58
RNU4-39P-201ENST00000362455 GNAZP19086 355 aa5.2□□□□□ -1.58
RNU4-39P-201ENST00000362455 SLC6A6P31641 620 aa5.2□□□□□ -1.58
RNU4-39P-201ENST00000362455 PTGER4P35408 488 aa5.2□□□□□ -1.58
RNU4-39P-201ENST00000362455 TCF7P36402 384 aaPredicted RBP5.2□□□□□ -1.58
RNU4-39P-201ENST00000362455 THBS3P49746 956 aa5.2□□□□□ -1.58
RNU4-39P-201ENST00000362455 MRPS6P82932 125 aaKnown RBP5.2□□□□□ -1.58
RNU4-39P-201ENST00000362455 ZXDBP98169 803 aa5.2□□□□□ -1.58
RNU4-39P-201ENST00000362455 DMPKQ09013 629 aa5.2□□□□□ -1.58
RNU4-39P-201ENST00000362455 NFE2L1Q14494 772 aa5.2□□□□□ -1.58
RNU4-39P-201ENST00000362455 SIRPB2Q5JXA9 342 aa5.2□□□□□ -1.58
RNU4-39P-201ENST00000362455 ELFN2Q5R3F8 820 aa5.2□□□□□ -1.58
RNU4-39P-201ENST00000362455 SHEQ5VZ18 495 aa5.2□□□□□ -1.58
RNU4-39P-201ENST00000362455 NADSYN1Q6IA69 706 aa5.2□□□□□ -1.58
RNU4-39P-201ENST00000362455 CWC27Q6UX04 472 aaKnown RBP5.2□□□□□ -1.58
RNU4-39P-201ENST00000362455 TMEM184AQ6ZMB5 413 aa5.2□□□□□ -1.58
RNU4-39P-201ENST00000362455 KCTD8Q6ZWB6 473 aa5.2□□□□□ -1.58
RNU4-39P-201ENST00000362455 PIWIL3Q7Z3Z3 882 aaKnown RBP5.2□□□□□ -1.58
RNU4-39P-201ENST00000362455 DSG4Q86SJ6 1040 aa5.2□□□□□ -1.58
RNU4-39P-201ENST00000362455 TIGD4Q8IY51 512 aa5.2□□□□□ -1.58
RNU4-39P-201ENST00000362455 TMEM105Q8N8V8 129 aa5.2□□□□□ -1.58
RNU4-39P-201ENST00000362455 NPEPL1Q8NDH3 523 aa5.2□□□□□ -1.58
RNU4-39P-201ENST00000362455 NUDCD2Q8WVJ2 157 aa5.2□□□□□ -1.58
RNU4-39P-201ENST00000362455 SECTM1Q8WVN6 248 aa5.2□□□□□ -1.58
RNU4-39P-201ENST00000362455 PIBF1Q8WXW3 757 aa5.2□□□□□ -1.58
RNU4-39P-201ENST00000362455 NSMAFQ92636 917 aa5.2□□□□□ -1.58
RNU4-39P-201ENST00000362455 EXOC4Q96A65 974 aa5.2□□□□□ -1.58
RNU4-39P-201ENST00000362455 IGSF21Q96ID5 467 aa5.2□□□□□ -1.58
RNU4-39P-201ENST00000362455 LYZL4Q96KX0 146 aa5.2□□□□□ -1.58
RNU4-39P-201ENST00000362455 SGK494Q96LW2 274 aa5.2□□□□□ -1.58
RNU4-39P-201ENST00000362455 C17orf77Q96MU5 243 aa5.2□□□□□ -1.58
RNU4-39P-201ENST00000362455 INPP5KQ9BT40 448 aa5.2□□□□□ -1.58
RNU4-39P-201ENST00000362455 TRAF4Q9BUZ4 470 aaPredicted RBP5.2□□□□□ -1.58
RNU4-39P-201ENST00000362455 GTPBP2Q9BX10 602 aaKnown RBP5.2□□□□□ -1.58
RNU4-39P-201ENST00000362455 DDX31Q9H8H2 851 aaKnown RBP5.2□□□□□ -1.58
RNU4-39P-201ENST00000362455 APOBEC3GQ9HC16 384 aaKnown RBP5.2□□□□□ -1.58
RNU4-39P-201ENST00000362455 UBIAD1Q9Y5Z9 338 aa5.2□□□□□ -1.58
RNU4-39P-201ENST00000362455 GPR179Q6PRD1 2367 aa5.2□□□□□ -1.58
RNU4-39P-201ENST00000362455 TANC1Q9C0D5 1861 aa5.2□□□□□ -1.58
RNU4-39P-201ENST00000362455 EP300Q09472 2414 aaPredicted RBP5.19□□□□□ -1.58
RNU4-39P-201ENST00000362455 A0A0U1RQK1 487 aa5.19□□□□□ -1.58
RNU4-39P-201ENST00000362455 ZNF320A2RRD8 509 aa5.19□□□□□ -1.58
RNU4-39P-201ENST00000362455 A4D1N5 150 aa5.19□□□□□ -1.58
RNU4-39P-201ENST00000362455 HIDE1A8MVS5 230 aa5.19□□□□□ -1.58
RNU4-39P-201ENST00000362455 PRAC2D3DTV9 90 aa5.19□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms