RNA–Protein interactions for RNA: ENST00000362402.1

RNU6-349P-201, Transcript of RNA, U6 small nuclear 349, pseudogene, humanhuman

BASIC

Gene RNU6-349P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-349P-201ENST00000362402 LIME1Q9H400 295 aa0.54□□□□□ -2.32
RNU6-349P-201ENST00000362402 ZNF331Q9NQX6 463 aaPredicted RBP0.54□□□□□ -2.32
RNU6-349P-201ENST00000362402 SLC13A4Q9UKG4 626 aa0.54□□□□□ -2.32
RNU6-349P-201ENST00000362402 PLAGL1Q9UM63 463 aa0.54□□□□□ -2.32
RNU6-349P-201ENST00000362402 ARHGAP23Q9P227 1491 aa0.54□□□□□ -2.32
RNU6-349P-201ENST00000362402 A6NLC8 198 aa0.53□□□□□ -2.32
RNU6-349P-201ENST00000362402 CCT8L1PA6NM43 557 aa0.53□□□□□ -2.32
RNU6-349P-201ENST00000362402 FOXI3A8MTJ6 420 aaPredicted RBP0.53□□□□□ -2.32
RNU6-349P-201ENST00000362402 A8MVM7 634 aa0.53□□□□□ -2.32
RNU6-349P-201ENST00000362402 C2CD4DB7Z1M9 353 aa0.53□□□□□ -2.32
RNU6-349P-201ENST00000362402 TCP10L2B9ZVM9 353 aa0.53□□□□□ -2.32
RNU6-349P-201ENST00000362402 PRSS46E5RG02 174 aa0.53□□□□□ -2.32
RNU6-349P-201ENST00000362402 SIGLEC5O15389 551 aa0.53□□□□□ -2.32
RNU6-349P-201ENST00000362402 SNX3O60493 162 aa0.53□□□□□ -2.32
RNU6-349P-201ENST00000362402 ZNF324O75467 553 aaPredicted RBP0.53□□□□□ -2.32
RNU6-349P-201ENST00000362402 TOXO94900 526 aa0.53□□□□□ -2.32
RNU6-349P-201ENST00000362402 IGKV1D-16P01601 117 aa0.53□□□□□ -2.32
RNU6-349P-201ENST00000362402 DLATP10515 647 aaKnown RBP0.53□□□□□ -2.32
RNU6-349P-201ENST00000362402 TOP1P11387 765 aaKnown RBP0.53□□□□□ -2.32
RNU6-349P-201ENST00000362402 ZNF823P16415 610 aa0.53□□□□□ -2.32
RNU6-349P-201ENST00000362402 MPZP25189 248 aa0.53□□□□□ -2.32
RNU6-349P-201ENST00000362402 RPL9P32969 192 aaKnown RBP0.53□□□□□ -2.32
RNU6-349P-201ENST00000362402 RBMXP38159 391 aaKnown RBP0.53□□□□□ -2.32
RNU6-349P-201ENST00000362402 MATR3P43243 847 aaKnown RBP eCLIP0.53□□□□□ -2.32
RNU6-349P-201ENST00000362402 ALDH3B1P43353 468 aa0.53□□□□□ -2.32
RNU6-349P-201ENST00000362402 MAGEA9P43362 315 aa0.53□□□□□ -2.32
RNU6-349P-201ENST00000362402 TNFRSF4P43489 277 aa0.53□□□□□ -2.32
RNU6-349P-201ENST00000362402 P2RY4P51582 365 aa0.53□□□□□ -2.32
RNU6-349P-201ENST00000362402 CRYBA2P53672 197 aa0.53□□□□□ -2.32
RNU6-349P-201ENST00000362402 SLC12A3P55017 1021 aa0.53□□□□□ -2.32
RNU6-349P-201ENST00000362402 PAX2Q02962 417 aa0.53□□□□□ -2.32
RNU6-349P-201ENST00000362402 CXCL9Q07325 125 aa0.53□□□□□ -2.32
RNU6-349P-201ENST00000362402 RASGEF1BQ0VAM2 473 aa0.53□□□□□ -2.32
RNU6-349P-201ENST00000362402 EIF4EBP1Q13541 118 aaPredicted RBP0.53□□□□□ -2.32
RNU6-349P-201ENST00000362402 CRYMQ14894 314 aa0.53□□□□□ -2.32
RNU6-349P-201ENST00000362402 NONOQ15233 471 aaKnown RBP eCLIP0.53□□□□□ -2.32
RNU6-349P-201ENST00000362402 PCK2Q16822 640 aa0.53□□□□□ -2.32
RNU6-349P-201ENST00000362402 SPANXN4Q5MJ08 99 aa0.53□□□□□ -2.32
RNU6-349P-201ENST00000362402 SNX30Q5VWJ9 437 aa0.53□□□□□ -2.32
RNU6-349P-201ENST00000362402 LIPJQ5W064 366 aa0.53□□□□□ -2.32
RNU6-349P-201ENST00000362402 REP15Q6BDI9 236 aa0.53□□□□□ -2.32
RNU6-349P-201ENST00000362402 KRT77Q7Z794 578 aa0.53□□□□□ -2.32
RNU6-349P-201ENST00000362402 TGIF2LYQ8IUE0 185 aa0.53□□□□□ -2.32
RNU6-349P-201ENST00000362402 C14orf178Q8N769 122 aaPredicted RBP0.53□□□□□ -2.32
RNU6-349P-201ENST00000362402 ANKRD42Q8N9B4 389 aa0.53□□□□□ -2.32
RNU6-349P-201ENST00000362402 SNRNP27Q8WVK2 155 aaKnown RBP0.53□□□□□ -2.32
RNU6-349P-201ENST00000362402 RBM18Q96H35 190 aaKnown RBP0.53□□□□□ -2.32
RNU6-349P-201ENST00000362402 RCHY1Q96PM5 261 aa0.53□□□□□ -2.32
RNU6-349P-201ENST00000362402 CCT8L2Q96SF2 557 aa0.53□□□□□ -2.32
RNU6-349P-201ENST00000362402 ZNF670Q9BS34 389 aa0.53□□□□□ -2.32
RNU6-349P-201ENST00000362402 FTOQ9C0B1 505 aaKnown RBP eCLIP0.53□□□□□ -2.32
RNU6-349P-201ENST00000362402 Q9H8V8 135 aa0.53□□□□□ -2.32
RNU6-349P-201ENST00000362402 RNF121Q9H920 327 aa0.53□□□□□ -2.32
RNU6-349P-201ENST00000362402 WASH6PQ9NQA3 447 aa0.53□□□□□ -2.32
RNU6-349P-201ENST00000362402 ARHGEF38Q9NXL2 777 aa0.53□□□□□ -2.32
RNU6-349P-201ENST00000362402 IL36AQ9UHA7 158 aa0.53□□□□□ -2.32
RNU6-349P-201ENST00000362402 ABT1Q9ULW3 272 aaKnown RBP0.53□□□□□ -2.32
RNU6-349P-201ENST00000362402 NIP7Q9Y221 180 aaKnown RBP eCLIP0.53□□□□□ -2.32
RNU6-349P-201ENST00000362402 FBXO7Q9Y3I1 522 aa0.53□□□□□ -2.32
RNU6-349P-201ENST00000362402 LRRK1Q38SD2 2015 aa0.53□□□□□ -2.32
RNU6-349P-201ENST00000362402 SHROOM4Q9ULL8 1493 aa0.53□□□□□ -2.33
RNU6-349P-201ENST00000362402 TRBV5-4A0A0C4DH59 114 aa0.52□□□□□ -2.33
RNU6-349P-201ENST00000362402 CASTOR2A6NHX0 329 aa0.52□□□□□ -2.33
RNU6-349P-201ENST00000362402 A8MU76 341 aa0.52□□□□□ -2.33
RNU6-349P-201ENST00000362402 ANKRD63C9JTQ0 380 aa0.52□□□□□ -2.33
RNU6-349P-201ENST00000362402 EEF2KO00418 725 aaKnown RBP0.52□□□□□ -2.33
RNU6-349P-201ENST00000362402 E2F3O00716 465 aa0.52□□□□□ -2.33
RNU6-349P-201ENST00000362402 FBP2O00757 339 aa0.52□□□□□ -2.33
RNU6-349P-201ENST00000362402 AP3D1O14617 1153 aa0.52□□□□□ -2.33
RNU6-349P-201ENST00000362402 IPO8O15397 1037 aaKnown RBP0.52□□□□□ -2.33
RNU6-349P-201ENST00000362402 GPAA1O43292 621 aa0.52□□□□□ -2.33
RNU6-349P-201ENST00000362402 SNAI2O43623 268 aa0.52□□□□□ -2.33
RNU6-349P-201ENST00000362402 STBD1O95210 358 aa0.52□□□□□ -2.33
RNU6-349P-201ENST00000362402 OR2C1O95371 312 aa0.52□□□□□ -2.33
RNU6-349P-201ENST00000362402 IGLV3-19P01714 112 aa0.52□□□□□ -2.33
RNU6-349P-201ENST00000362402 SKILP12757 684 aa0.52□□□□□ -2.33
RNU6-349P-201ENST00000362402 SFTPDP35247 375 aa0.52□□□□□ -2.33
RNU6-349P-201ENST00000362402 MFAP4P55083 255 aa0.52□□□□□ -2.33
RNU6-349P-201ENST00000362402 RPS8P62241 208 aaKnown RBP0.52□□□□□ -2.33
RNU6-349P-201ENST00000362402 CCL14Q16627 93 aa0.52□□□□□ -2.33
RNU6-349P-201ENST00000362402 TSTQ16762 297 aaKnown RBP0.52□□□□□ -2.33
RNU6-349P-201ENST00000362402 VWC2Q2TAL6 325 aa0.52□□□□□ -2.33
RNU6-349P-201ENST00000362402 CNPY1Q3B7I2 92 aa0.52□□□□□ -2.33
RNU6-349P-201ENST00000362402 IGSF11Q5DX21 431 aa0.52□□□□□ -2.33
RNU6-349P-201ENST00000362402 TMEM211Q6ICI0 200 aa0.52□□□□□ -2.33
RNU6-349P-201ENST00000362402 IKBIPQ70UQ0 350 aa0.52□□□□□ -2.33
RNU6-349P-201ENST00000362402 APOBEC3FQ8IUX4 373 aaKnown RBP0.52□□□□□ -2.33
RNU6-349P-201ENST00000362402 ERI1Q8IV48 349 aaKnown RBP0.52□□□□□ -2.33
RNU6-349P-201ENST00000362402 ADGRF2Q8IZF7 708 aa0.52□□□□□ -2.33
RNU6-349P-201ENST00000362402 WDTC1Q8N5D0 677 aa0.52□□□□□ -2.33
RNU6-349P-201ENST00000362402 XXYLT1Q8NBI6 393 aa0.52□□□□□ -2.33
RNU6-349P-201ENST00000362402 ZNF397Q8NF99 534 aaPredicted RBP0.52□□□□□ -2.33
RNU6-349P-201ENST00000362402 TBCKQ8TEA7 893 aa0.52□□□□□ -2.33
RNU6-349P-201ENST00000362402 PCNPQ8WW12 178 aaKnown RBP0.52□□□□□ -2.33
RNU6-349P-201ENST00000362402 JAKMIP2Q96AA8 810 aa0.52□□□□□ -2.33
RNU6-349P-201ENST00000362402 NTNG2Q96CW9 530 aa0.52□□□□□ -2.33
RNU6-349P-201ENST00000362402 SAT2Q96F10 170 aaPredicted RBP0.52□□□□□ -2.33
RNU6-349P-201ENST00000362402 SCLT1Q96NL6 688 aa0.52□□□□□ -2.33
RNU6-349P-201ENST00000362402 CASD1Q96PB1 797 aa0.52□□□□□ -2.33
RNU6-349P-201ENST00000362402 SEPHS2Q99611 448 aa0.52□□□□□ -2.33
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms