RNA–Protein interactions for RNA: ENST00000361716.7

VAMP1-201, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 1 (best) BASIC

Gene VAMP1, Length 3,449 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-201ENST00000361716 RGRP47804 291 aa12.25□□□□□ -0.45
VAMP1-201ENST00000361716 PTPN5P54829 565 aa12.25□□□□□ -0.45
VAMP1-201ENST00000361716 NFKB2Q00653 900 aa12.25□□□□□ -0.45
VAMP1-201ENST00000361716 BCDIN3DQ7Z5W3 292 aaKnown RBP12.25□□□□□ -0.45
VAMP1-201ENST00000361716 ZZZ3Q8IYH5 903 aa12.25□□□□□ -0.45
VAMP1-201ENST00000361716 SDR16C5Q8N3Y7 309 aa12.25□□□□□ -0.45
VAMP1-201ENST00000361716 Q8N402 240 aa12.25□□□□□ -0.45
VAMP1-201ENST00000361716 CEP76Q8TAP6 659 aa12.25□□□□□ -0.45
VAMP1-201ENST00000361716 PDLIM5Q96HC4 596 aaKnown RBP12.25□□□□□ -0.45
VAMP1-201ENST00000361716 C8orf48Q96LL4 319 aa12.25□□□□□ -0.45
VAMP1-201ENST00000361716 PPP3R2Q96LZ3 170 aa12.25□□□□□ -0.45
VAMP1-201ENST00000361716 SORBS1Q9BX66 1292 aaKnown RBP12.25□□□□□ -0.45
VAMP1-201ENST00000361716 NUP50Q9UKX7 468 aa12.25□□□□□ -0.45
VAMP1-201ENST00000361716 CLEC4AQ9UMR7 237 aa12.25□□□□□ -0.45
VAMP1-201ENST00000361716 MYL12BO14950 172 aa12.25□□□□□ -0.45
VAMP1-201ENST00000361716 HRGP04196 525 aa12.25□□□□□ -0.45
VAMP1-201ENST00000361716 ENGP17813 658 aa12.25□□□□□ -0.45
VAMP1-201ENST00000361716 MYL12AP19105 171 aa12.25□□□□□ -0.45
VAMP1-201ENST00000361716 ITPKAP23677 461 aa12.25□□□□□ -0.45
VAMP1-201ENST00000361716 MAGEA11P43364 429 aa12.25□□□□□ -0.45
VAMP1-201ENST00000361716 HK3P52790 923 aa12.25□□□□□ -0.45
VAMP1-201ENST00000361716 CRYBB1P53674 252 aaPredicted RBP12.25□□□□□ -0.45
VAMP1-201ENST00000361716 KLHL12Q53G59 568 aa12.25□□□□□ -0.45
VAMP1-201ENST00000361716 XKR7Q5GH72 579 aa12.25□□□□□ -0.45
VAMP1-201ENST00000361716 ATXN7L2Q5T6C5 722 aaPredicted RBP12.25□□□□□ -0.45
VAMP1-201ENST00000361716 SAXO2Q658L1 398 aa12.25□□□□□ -0.45
VAMP1-201ENST00000361716 NKAPQ8N5F7 415 aaKnown RBP12.25□□□□□ -0.45
VAMP1-201ENST00000361716 ZFP41Q8N8Y5 198 aa12.25□□□□□ -0.45
VAMP1-201ENST00000361716 KLHDC9Q8NEP7 349 aa12.25□□□□□ -0.45
VAMP1-201ENST00000361716 OR10G2Q8NGC3 310 aa12.25□□□□□ -0.45
VAMP1-201ENST00000361716 TESCQ96BS2 214 aa12.25□□□□□ -0.45
VAMP1-201ENST00000361716 BARHL1Q9BZE3 327 aa12.25□□□□□ -0.45
VAMP1-201ENST00000361716 DIABLOQ9NR28 239 aa12.25□□□□□ -0.45
VAMP1-201ENST00000361716 CRLS1Q9UJA2 301 aa12.25□□□□□ -0.45
VAMP1-201ENST00000361716 MN1Q10571 1320 aaPredicted RBP12.25□□□□□ -0.45
VAMP1-201ENST00000361716 MYO7AQ13402 2215 aa12.25□□□□□ -0.45
VAMP1-201ENST00000361716 A0A1W2PRG6 482 aa12.25□□□□□ -0.45
VAMP1-201ENST00000361716 GSAPA4D1B5 854 aa12.25□□□□□ -0.45
VAMP1-201ENST00000361716 SLC35F4A4IF30 521 aa12.25□□□□□ -0.45
VAMP1-201ENST00000361716 GABRDO14764 452 aa12.25□□□□□ -0.45
VAMP1-201ENST00000361716 RPS17P08708 135 aaKnown RBP12.25□□□□□ -0.45
VAMP1-201ENST00000361716 PRKAR1AP10644 381 aa12.25□□□□□ -0.45
VAMP1-201ENST00000361716 CTRB1P17538 263 aa12.25□□□□□ -0.45
VAMP1-201ENST00000361716 PRIM2P49643 509 aa12.25□□□□□ -0.45
VAMP1-201ENST00000361716 RAB8AP61006 207 aa12.25□□□□□ -0.45
VAMP1-201ENST00000361716 BOP1Q14137 746 aaKnown RBP12.25□□□□□ -0.45
VAMP1-201ENST00000361716 CTRB2Q6GPI1 263 aa12.25□□□□□ -0.45
VAMP1-201ENST00000361716 MZT2BQ6NZ67 158 aa12.25□□□□□ -0.45
VAMP1-201ENST00000361716 ERICH5Q6P6B1 374 aa12.25□□□□□ -0.45
VAMP1-201ENST00000361716 HS6ST3Q8IZP7 471 aa12.25□□□□□ -0.45
VAMP1-201ENST00000361716 LRRC17Q8N6Y2 441 aa12.25□□□□□ -0.45
VAMP1-201ENST00000361716 DNAJC5GQ8N7S2 189 aa12.25□□□□□ -0.45
VAMP1-201ENST00000361716 ATG10Q9H0Y0 220 aa12.25□□□□□ -0.45
VAMP1-201ENST00000361716 MED28Q9H204 178 aa12.25□□□□□ -0.45
VAMP1-201ENST00000361716 ASB8Q9H765 288 aa12.25□□□□□ -0.45
VAMP1-201ENST00000361716 ING4Q9UNL4 249 aa12.25□□□□□ -0.45
VAMP1-201ENST00000361716 MRPS7Q9Y2R9 242 aaKnown RBP12.25□□□□□ -0.45
VAMP1-201ENST00000361716 DOCK1Q14185 1865 aa12.24□□□□□ -0.45
VAMP1-201ENST00000361716 FGF1P05230 155 aa12.24□□□□□ -0.45
VAMP1-201ENST00000361716 CTXN3Q4LDR2 81 aa12.24□□□□□ -0.45
VAMP1-201ENST00000361716 ZC3H12BQ5HYM0 836 aaKnown RBP12.24□□□□□ -0.45
VAMP1-201ENST00000361716 SUSD1Q6UWL2 747 aa12.24□□□□□ -0.45
VAMP1-201ENST00000361716 TMIGD1Q6UXZ0 262 aa12.24□□□□□ -0.45
VAMP1-201ENST00000361716 AGMOQ6ZNB7 445 aa12.24□□□□□ -0.45
VAMP1-201ENST00000361716 ADAMTSL2Q86TH1 951 aa12.24□□□□□ -0.45
VAMP1-201ENST00000361716 LINC01465Q8N7H1 131 aa12.24□□□□□ -0.45
VAMP1-201ENST00000361716 ERVMER34-1Q9H9K5 563 aa12.24□□□□□ -0.45
VAMP1-201ENST00000361716 GKN1Q9NS71 199 aa12.24□□□□□ -0.45
VAMP1-201ENST00000361716 SH3BP4Q9P0V3 963 aa12.24□□□□□ -0.45
VAMP1-201ENST00000361716 EIF3KQ9UBQ5 218 aaKnown RBP12.24□□□□□ -0.45
VAMP1-201ENST00000361716 NDRG2Q9UN36 371 aaKnown RBP12.24□□□□□ -0.45
VAMP1-201ENST00000361716 PPIEQ9UNP9 301 aaKnown RBP12.24□□□□□ -0.45
VAMP1-201ENST00000361716 AP3M1Q9Y2T2 418 aa12.24□□□□□ -0.45
VAMP1-201ENST00000361716 INMT-MINDY4F8WBC2 141 aa12.24□□□□□ -0.45
VAMP1-201ENST00000361716 SLC22A5O76082 557 aa12.24□□□□□ -0.45
VAMP1-201ENST00000361716 PLATP00750 562 aa12.24□□□□□ -0.45
VAMP1-201ENST00000361716 RETP07949 1114 aa12.24□□□□□ -0.45
VAMP1-201ENST00000361716 NUDT7P0C024 238 aa12.24□□□□□ -0.45
VAMP1-201ENST00000361716 BCL2L15Q5TBC7 163 aa12.24□□□□□ -0.45
VAMP1-201ENST00000361716 PLEKHH3Q7Z736 793 aa12.24□□□□□ -0.45
VAMP1-201ENST00000361716 RGL4Q8IZJ4 473 aa12.24□□□□□ -0.45
VAMP1-201ENST00000361716 CARNMT1Q8N4J0 409 aa12.24□□□□□ -0.45
VAMP1-201ENST00000361716 SETD6Q8TBK2 473 aa12.24□□□□□ -0.45
VAMP1-201ENST00000361716 OTULINQ96BN8 352 aa12.24□□□□□ -0.45
VAMP1-201ENST00000361716 MYEOVQ96EZ4 313 aa12.24□□□□□ -0.45
VAMP1-201ENST00000361716 QRFPRQ96P65 431 aa12.24□□□□□ -0.45
VAMP1-201ENST00000361716 SRRQ9GZT4 340 aa12.24□□□□□ -0.45
VAMP1-201ENST00000361716 TMEM161AQ9NX61 479 aa12.24□□□□□ -0.45
VAMP1-201ENST00000361716 ARL15Q9NXU5 204 aa12.24□□□□□ -0.45
VAMP1-201ENST00000361716 SCML1Q9UN30 329 aa12.24□□□□□ -0.45
VAMP1-201ENST00000361716 MIA3Q5JRA6 1907 aa12.24□□□□□ -0.45
VAMP1-201ENST00000361716 CLIC1O00299 241 aa12.24□□□□□ -0.45
VAMP1-201ENST00000361716 SLC25A14O95258 325 aaPredicted RBP12.24□□□□□ -0.45
VAMP1-201ENST00000361716 ESR1P03372 595 aa12.24□□□□□ -0.45
VAMP1-201ENST00000361716 SYPP08247 313 aa12.24□□□□□ -0.45
VAMP1-201ENST00000361716 RPL35P42766 123 aaKnown RBP12.24□□□□□ -0.45
VAMP1-201ENST00000361716 RPS5P46782 204 aaKnown RBP12.24□□□□□ -0.45
VAMP1-201ENST00000361716 CDC42EP1Q00587 391 aa12.24□□□□□ -0.45
VAMP1-201ENST00000361716 RHAGQ02094 409 aa12.24□□□□□ -0.45
VAMP1-201ENST00000361716 GRIK2Q13002 908 aa12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 85.7 ms