RNA–Protein interactions for RNA: ENST00000361367.6

CTR9-201, Transcript of CTR9 homolog, Paf1/RNA polymerase II complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTR9, Length 4,586 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTR9-201ENST00000361367 ASB16Q96NS5 453 aa13.36□□□□□ -0.27
CTR9-201ENST00000361367 C1orf21Q9H246 121 aa13.36□□□□□ -0.27
CTR9-201ENST00000361367 PRTFDC1Q9NRG1 225 aa13.36□□□□□ -0.27
CTR9-201ENST00000361367 ALKBH4Q9NXW9 302 aa13.36□□□□□ -0.27
CTR9-201ENST00000361367 OR2B3O76000 313 aa13.36□□□□□ -0.27
CTR9-201ENST00000361367 HNRNPCP07910 306 aaKnown RBP eCLIP13.36□□□□□ -0.27
CTR9-201ENST00000361367 XKP51811 444 aa13.36□□□□□ -0.27
CTR9-201ENST00000361367 SRP54P61011 504 aaKnown RBP13.36□□□□□ -0.27
CTR9-201ENST00000361367 SLAMF1Q13291 335 aa13.36□□□□□ -0.27
CTR9-201ENST00000361367 IRF4Q15306 451 aa13.36□□□□□ -0.27
CTR9-201ENST00000361367 TAF1LQ8IZX4 1826 aa13.36□□□□□ -0.27
CTR9-201ENST00000361367 GEMIN6Q8WXD5 167 aaKnown RBP13.36□□□□□ -0.27
CTR9-201ENST00000361367 SMPDL3BQ92485 455 aa13.36□□□□□ -0.27
CTR9-201ENST00000361367 L3HYPDHQ96EM0 354 aa13.36□□□□□ -0.27
CTR9-201ENST00000361367 MEAF6Q9HAF1 191 aa13.36□□□□□ -0.27
CTR9-201ENST00000361367 NEK6Q9HC98 313 aa13.36□□□□□ -0.27
CTR9-201ENST00000361367 IRGMA1A4Y4 181 aa13.36□□□□□ -0.27
CTR9-201ENST00000361367 KPNA4O00629 521 aaPredicted RBP13.36□□□□□ -0.27
CTR9-201ENST00000361367 ANGPTL1O95841 491 aa13.36□□□□□ -0.27
CTR9-201ENST00000361367 NPPAP01160 153 aa13.36□□□□□ -0.27
CTR9-201ENST00000361367 SYPP08247 313 aa13.36□□□□□ -0.27
CTR9-201ENST00000361367 PBX2P40425 430 aa13.36□□□□□ -0.27
CTR9-201ENST00000361367 TNFRSF4P43489 277 aa13.36□□□□□ -0.27
CTR9-201ENST00000361367 PGFP49763 221 aa13.36□□□□□ -0.27
CTR9-201ENST00000361367 ENPP2Q13822 863 aa13.36□□□□□ -0.27
CTR9-201ENST00000361367 DECR1Q16698 335 aa13.36□□□□□ -0.27
CTR9-201ENST00000361367 ALKBH2Q6NS38 261 aa13.36□□□□□ -0.27
CTR9-201ENST00000361367 PLXDC1Q8IUK5 500 aa13.36□□□□□ -0.27
CTR9-201ENST00000361367 ACVR1CQ8NER5 493 aa13.36□□□□□ -0.27
CTR9-201ENST00000361367 RIT1Q92963 219 aa13.36□□□□□ -0.27
CTR9-201ENST00000361367 ZNF570Q96NI8 536 aa13.36□□□□□ -0.27
CTR9-201ENST00000361367 CDADC1Q9BWV3 514 aa13.36□□□□□ -0.27
CTR9-201ENST00000361367 MRPS26Q9BYN8 205 aaKnown RBP13.36□□□□□ -0.27
CTR9-201ENST00000361367 FAM192AQ9GZU8 254 aa13.36□□□□□ -0.27
CTR9-201ENST00000361367 POLR2J3Q9H1A7 115 aaKnown RBP13.36□□□□□ -0.27
CTR9-201ENST00000361367 EPB41L1Q9H4G0 881 aa13.36□□□□□ -0.27
CTR9-201ENST00000361367 PRSS16Q9NQE7 514 aa13.36□□□□□ -0.27
CTR9-201ENST00000361367 GPRC5BQ9NZH0 403 aa13.36□□□□□ -0.27
CTR9-201ENST00000361367 ACTR3BQ9P1U1 418 aa13.36□□□□□ -0.27
CTR9-201ENST00000361367 NME7Q9Y5B8 376 aa13.36□□□□□ -0.27
CTR9-201ENST00000361367 B4GALT3O60512 393 aa13.35□□□□□ -0.27
CTR9-201ENST00000361367 MYBPC1Q00872 1141 aa13.35□□□□□ -0.27
CTR9-201ENST00000361367 LRP8Q14114 963 aa13.35□□□□□ -0.27
CTR9-201ENST00000361367 FIGLAQ6QHK4 219 aa13.35□□□□□ -0.27
CTR9-201ENST00000361367 IQCHQ86VS3 1027 aa13.35□□□□□ -0.27
CTR9-201ENST00000361367 RNF130Q86XS8 419 aa13.35□□□□□ -0.27
CTR9-201ENST00000361367 CCDC103Q8IW40 242 aa13.35□□□□□ -0.27
CTR9-201ENST00000361367 KRTCAP2Q8N6L1 136 aa13.35□□□□□ -0.27
CTR9-201ENST00000361367 AMER2Q8N7J2 671 aa13.35□□□□□ -0.27
CTR9-201ENST00000361367 OR5K1Q8NHB7 308 aa13.35□□□□□ -0.27
CTR9-201ENST00000361367 WFDC5Q8TCV5 224 aa13.35□□□□□ -0.27
CTR9-201ENST00000361367 RHBDF1Q96CC6 855 aa13.35□□□□□ -0.27
CTR9-201ENST00000361367 HSPA12BQ96MM6 686 aa13.35□□□□□ -0.27
CTR9-201ENST00000361367 TAS2R9Q9NYW1 312 aa13.35□□□□□ -0.27
CTR9-201ENST00000361367 IKZF2Q9UKS7 526 aa13.35□□□□□ -0.27
CTR9-201ENST00000361367 ANKRD31Q8N7Z5 1873 aa13.35□□□□□ -0.27
CTR9-201ENST00000361367 PNMA8CA0A1B0GUJ8 204 aa13.35□□□□□ -0.27
CTR9-201ENST00000361367 ELOA3DA6NLF2 546 aaPredicted RBP13.35□□□□□ -0.27
CTR9-201ENST00000361367 G3V2L1 256 aa13.35□□□□□ -0.27
CTR9-201ENST00000361367 ANXA8P13928 327 aa13.35□□□□□ -0.27
CTR9-201ENST00000361367 CASRP41180 1078 aa13.35□□□□□ -0.27
CTR9-201ENST00000361367 ERVPABLB-1P60509 514 aa13.35□□□□□ -0.27
CTR9-201ENST00000361367 ELOA3BQ3SY89 546 aa13.35□□□□□ -0.27
CTR9-201ENST00000361367 TREML1Q86YW5 311 aa13.35□□□□□ -0.27
CTR9-201ENST00000361367 ELOA3Q8NG57 546 aa13.35□□□□□ -0.27
CTR9-201ENST00000361367 RAB8BQ92930 207 aa13.35□□□□□ -0.27
CTR9-201ENST00000361367 MR1Q95460 341 aa13.35□□□□□ -0.27
CTR9-201ENST00000361367 COQ10BQ9H8M1 238 aa13.35□□□□□ -0.27
CTR9-201ENST00000361367 MKKSQ9NPJ1 570 aaPredicted RBP13.35□□□□□ -0.27
CTR9-201ENST00000361367 AIG1Q9NVV5 245 aa13.35□□□□□ -0.27
CTR9-201ENST00000361367 MKL2Q9ULH7 1088 aa13.35□□□□□ -0.27
CTR9-201ENST00000361367 RAB26Q9ULW5 256 aa13.35□□□□□ -0.27
CTR9-201ENST00000361367 ZBTB11O95625 1053 aaPredicted RBP13.35□□□□□ -0.27
CTR9-201ENST00000361367 CKMT2P17540 419 aa13.35□□□□□ -0.27
CTR9-201ENST00000361367 AHCYP23526 432 aa13.35□□□□□ -0.27
CTR9-201ENST00000361367 NUDT1P36639 197 aa13.35□□□□□ -0.27
CTR9-201ENST00000361367 KRR1Q13601 381 aaKnown RBP13.35□□□□□ -0.27
CTR9-201ENST00000361367 PDZK1Q5T2W1 519 aa13.35□□□□□ -0.27
CTR9-201ENST00000361367 KCTD11Q693B1 232 aa13.35□□□□□ -0.27
CTR9-201ENST00000361367 DUS1LQ6P1R4 473 aaKnown RBP13.35□□□□□ -0.27
CTR9-201ENST00000361367 PARM1Q6UWI2 310 aa13.35□□□□□ -0.27
CTR9-201ENST00000361367 AURKBQ96GD4 344 aaPredicted RBP13.35□□□□□ -0.27
CTR9-201ENST00000361367 MPP4Q96JB8 637 aa13.35□□□□□ -0.27
CTR9-201ENST00000361367 RACGAP1Q9H0H5 632 aa13.35□□□□□ -0.27
CTR9-201ENST00000361367 HDHD2Q9H0R4 259 aa13.35□□□□□ -0.27
CTR9-201ENST00000361367 ACTL8Q9H568 366 aa13.35□□□□□ -0.27
CTR9-201ENST00000361367 WDR45Q9Y484 360 aa13.35□□□□□ -0.27
CTR9-201ENST00000361367 CREG1O75629 220 aa13.35□□□□□ -0.27
CTR9-201ENST00000361367 MATN1P21941 496 aa13.35□□□□□ -0.27
CTR9-201ENST00000361367 HTR6P50406 440 aa13.35□□□□□ -0.27
CTR9-201ENST00000361367 PCDH1Q08174 1060 aa13.35□□□□□ -0.27
CTR9-201ENST00000361367 TMEM35AQ53FP2 167 aa13.35□□□□□ -0.27
CTR9-201ENST00000361367 ARMC4Q5T2S8 1044 aa13.35□□□□□ -0.27
CTR9-201ENST00000361367 SMARCD3Q6STE5 483 aa13.35□□□□□ -0.27
CTR9-201ENST00000361367 OR4C6Q8NH72 309 aa13.35□□□□□ -0.27
CTR9-201ENST00000361367 TMEM184CQ9NVA4 438 aa13.35□□□□□ -0.27
CTR9-201ENST00000361367 E7EQ34 232 aa13.34□□□□□ -0.27
CTR9-201ENST00000361367 SCDO00767 359 aa13.34□□□□□ -0.27
CTR9-201ENST00000361367 MGRN1O60291 552 aa13.34□□□□□ -0.27
CTR9-201ENST00000361367 NOBOXO60393 691 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms