RNA–Protein interactions for RNA: ENST00000361246.6

CDC42BPB-201, Transcript of CDC42 binding protein kinase beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42BPB, Length 6,758 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-201ENST00000361246 ZNF180Q9UJW8 692 aa19.62■□□□□ 0.73
CDC42BPB-201ENST00000361246 SPIN1Q9Y657 262 aaPredicted RBP19.62■□□□□ 0.73
CDC42BPB-201ENST00000361246 A6NLC8 198 aa19.62■□□□□ 0.73
CDC42BPB-201ENST00000361246 KCNC4Q03721 635 aa19.62■□□□□ 0.73
CDC42BPB-201ENST00000361246 NSMAFQ92636 917 aa19.62■□□□□ 0.73
CDC42BPB-201ENST00000361246 TUBGCP5Q96RT8 1024 aa19.62■□□□□ 0.73
CDC42BPB-201ENST00000361246 METTL8Q9H825 291 aaKnown RBP19.62■□□□□ 0.73
CDC42BPB-201ENST00000361246 KCNS2Q9ULS6 477 aa19.62■□□□□ 0.73
CDC42BPB-201ENST00000361246 RBMX2Q9Y388 322 aaKnown RBP19.62■□□□□ 0.73
CDC42BPB-201ENST00000361246 NUDT6P53370 316 aa19.62■□□□□ 0.73
CDC42BPB-201ENST00000361246 DCAF12L1Q5VU92 463 aa19.62■□□□□ 0.73
CDC42BPB-201ENST00000361246 AQP11Q8NBQ7 271 aa19.62■□□□□ 0.73
CDC42BPB-201ENST00000361246 TMEM74Q96NL1 305 aa19.62■□□□□ 0.73
CDC42BPB-201ENST00000361246 SIX4Q9UIU6 781 aa19.62■□□□□ 0.73
CDC42BPB-201ENST00000361246 DLGAP4Q9Y2H0 992 aa19.62■□□□□ 0.73
CDC42BPB-201ENST00000361246 PRPS1L1P21108 318 aa19.61■□□□□ 0.73
CDC42BPB-201ENST00000361246 NTSR1P30989 418 aa19.61■□□□□ 0.73
CDC42BPB-201ENST00000361246 CDCA2Q69YH5 1023 aaPredicted RBP19.61■□□□□ 0.73
CDC42BPB-201ENST00000361246 MYOM1P52179 1685 aa19.61■□□□□ 0.73
CDC42BPB-201ENST00000361246 CD70P32970 193 aa19.61■□□□□ 0.73
CDC42BPB-201ENST00000361246 LRRC57Q8N9N7 239 aa19.61■□□□□ 0.73
CDC42BPB-201ENST00000361246 EPYCQ99645 322 aa19.61■□□□□ 0.73
CDC42BPB-201ENST00000361246 EIF2B3Q9NR50 452 aaKnown RBP19.61■□□□□ 0.73
CDC42BPB-201ENST00000361246 PLIN4Q96Q06 1357 aa19.61■□□□□ 0.73
CDC42BPB-201ENST00000361246 ZSCAN5BA6NJL1 495 aa19.61■□□□□ 0.73
CDC42BPB-201ENST00000361246 SCELO95171 688 aa19.61■□□□□ 0.73
CDC42BPB-201ENST00000361246 PBX1P40424 430 aa19.61■□□□□ 0.73
CDC42BPB-201ENST00000361246 MFSD2AQ8NA29 543 aa19.61■□□□□ 0.73
CDC42BPB-201ENST00000361246 EFCAB11Q9BUY7 163 aa19.61■□□□□ 0.73
CDC42BPB-201ENST00000361246 COQ10BQ9H8M1 238 aa19.61■□□□□ 0.73
CDC42BPB-201ENST00000361246 SMPD3Q9NY59 655 aaPredicted RBP19.61■□□□□ 0.73
CDC42BPB-201ENST00000361246 OAS1P00973 400 aaKnown RBP19.61■□□□□ 0.73
CDC42BPB-201ENST00000361246 BMP1P13497 986 aa19.61■□□□□ 0.73
CDC42BPB-201ENST00000361246 ERVK-8P63133 956 aa19.61■□□□□ 0.73
CDC42BPB-201ENST00000361246 TMEM31Q5JXX7 168 aa19.61■□□□□ 0.73
CDC42BPB-201ENST00000361246 ADGRD2Q7Z7M1 963 aa19.61■□□□□ 0.73
CDC42BPB-201ENST00000361246 TRPV1Q8NER1 839 aa19.61■□□□□ 0.73
CDC42BPB-201ENST00000361246 C6P13671 934 aa19.61■□□□□ 0.73
CDC42BPB-201ENST00000361246 BMP8BP34820 402 aa19.61■□□□□ 0.73
CDC42BPB-201ENST00000361246 SLC5A9Q2M3M2 681 aa19.61■□□□□ 0.73
CDC42BPB-201ENST00000361246 TMPPEQ6ZT21 453 aa19.61■□□□□ 0.73
CDC42BPB-201ENST00000361246 BMP8AQ7Z5Y6 402 aa19.61■□□□□ 0.73
CDC42BPB-201ENST00000361246 HM13Q8TCT9 377 aa19.61■□□□□ 0.73
CDC42BPB-201ENST00000361246 FAM129BQ96TA1 746 aa19.61■□□□□ 0.73
CDC42BPB-201ENST00000361246 FBRSL1Q9HCM7 1045 aaKnown RBP19.61■□□□□ 0.73
CDC42BPB-201ENST00000361246 DNAJC27Q9NZQ0 273 aa19.61■□□□□ 0.73
CDC42BPB-201ENST00000361246 G6PDP11413 515 aa19.6■□□□□ 0.73
CDC42BPB-201ENST00000361246 DSC3Q14574 896 aa19.6■□□□□ 0.73
CDC42BPB-201ENST00000361246 DUOXA1Q1HG43 343 aa19.6■□□□□ 0.73
CDC42BPB-201ENST00000361246 ADNP2Q6IQ32 1131 aa19.6■□□□□ 0.73
CDC42BPB-201ENST00000361246 DENND1AQ8TEH3 1009 aa19.6■□□□□ 0.73
CDC42BPB-201ENST00000361246 CCDC115Q96NT0 180 aa19.6■□□□□ 0.73
CDC42BPB-201ENST00000361246 LAMP5Q9UJQ1 280 aa19.6■□□□□ 0.73
CDC42BPB-201ENST00000361246 YY2O15391 372 aa19.6■□□□□ 0.73
CDC42BPB-201ENST00000361246 PMS2P3Q13401 168 aa19.6■□□□□ 0.73
CDC42BPB-201ENST00000361246 FIP1L1Q6UN15 594 aaKnown RBP19.6■□□□□ 0.73
CDC42BPB-201ENST00000361246 SPERTQ8NA61 448 aa19.6■□□□□ 0.73
CDC42BPB-201ENST00000361246 MAP3K3Q99759 626 aa19.6■□□□□ 0.73
CDC42BPB-201ENST00000361246 AHCYL1O43865 530 aa19.6■□□□□ 0.73
CDC42BPB-201ENST00000361246 ZNF865P0CJ78 1059 aaPredicted RBP19.6■□□□□ 0.73
CDC42BPB-201ENST00000361246 SHMT2P34897 504 aa19.6■□□□□ 0.73
CDC42BPB-201ENST00000361246 LRIT3Q3SXY7 679 aa19.6■□□□□ 0.73
CDC42BPB-201ENST00000361246 ASB18Q6ZVZ8 466 aa19.6■□□□□ 0.73
CDC42BPB-201ENST00000361246 ASPGQ86U10 573 aa19.6■□□□□ 0.73
CDC42BPB-201ENST00000361246 HAVCR1Q96D42 359 aa19.6■□□□□ 0.73
CDC42BPB-201ENST00000361246 PADI2Q9Y2J8 665 aa19.6■□□□□ 0.73
CDC42BPB-201ENST00000361246 PDLIM1O00151 329 aa19.6■□□□□ 0.73
CDC42BPB-201ENST00000361246 AHSA1O95433 338 aa19.6■□□□□ 0.73
CDC42BPB-201ENST00000361246 PLCXD2Q0VAA5 305 aa19.6■□□□□ 0.73
CDC42BPB-201ENST00000361246 ZNF283Q8N7M2 679 aa19.6■□□□□ 0.73
CDC42BPB-201ENST00000361246 OR4K14Q8NGD5 310 aa19.6■□□□□ 0.73
CDC42BPB-201ENST00000361246 MYLIPQ8WY64 445 aa19.6■□□□□ 0.73
CDC42BPB-201ENST00000361246 MGAT4AQ9UM21 535 aa19.6■□□□□ 0.73
CDC42BPB-201ENST00000361246 HCN4Q9Y3Q4 1203 aa19.6■□□□□ 0.73
CDC42BPB-201ENST00000361246 SLC25A11Q02978 314 aaKnown RBP19.6■□□□□ 0.73
CDC42BPB-201ENST00000361246 CWF19L1Q69YN2 538 aaKnown RBP19.6■□□□□ 0.73
CDC42BPB-201ENST00000361246 FIGNL1Q6PIW4 674 aa19.6■□□□□ 0.73
CDC42BPB-201ENST00000361246 LGI4Q8N135 537 aa19.6■□□□□ 0.73
CDC42BPB-201ENST00000361246 DTX3Q8N9I9 347 aa19.6■□□□□ 0.73
CDC42BPB-201ENST00000361246 ZNF347Q96SE7 839 aa19.6■□□□□ 0.73
CDC42BPB-201ENST00000361246 PCDHB14Q9Y5E9 798 aa19.6■□□□□ 0.73
CDC42BPB-201ENST00000361246 MYH6P13533 1939 aa19.6■□□□□ 0.73
CDC42BPB-201ENST00000361246 EFCAB9A8MZ26 197 aa19.59■□□□□ 0.73
CDC42BPB-201ENST00000361246 GALK2Q01415 458 aa19.59■□□□□ 0.73
CDC42BPB-201ENST00000361246 ZNF782Q6ZMW2 699 aaPredicted RBP19.59■□□□□ 0.73
CDC42BPB-201ENST00000361246 IGFN1Q86VF2 1251 aa19.59■□□□□ 0.73
CDC42BPB-201ENST00000361246 M0R2N6 131 aa19.59■□□□□ 0.73
CDC42BPB-201ENST00000361246 AIREO43918 545 aa19.59■□□□□ 0.73
CDC42BPB-201ENST00000361246 SLC9A3P48764 834 aa19.59■□□□□ 0.73
CDC42BPB-201ENST00000361246 ARPC4P59998 168 aa19.59■□□□□ 0.73
CDC42BPB-201ENST00000361246 TREML1Q86YW5 311 aa19.59■□□□□ 0.73
CDC42BPB-201ENST00000361246 SIAH1Q8IUQ4 282 aa19.59■□□□□ 0.73
CDC42BPB-201ENST00000361246 NAT8LQ8N9F0 302 aa19.59■□□□□ 0.73
CDC42BPB-201ENST00000361246 TCHHQ07283 1943 aa19.59■□□□□ 0.73
CDC42BPB-201ENST00000361246 E2F3O00716 465 aa19.59■□□□□ 0.73
CDC42BPB-201ENST00000361246 CBSLP0DN79 551 aa19.59■□□□□ 0.73
CDC42BPB-201ENST00000361246 CBSP35520 551 aa19.59■□□□□ 0.73
CDC42BPB-201ENST00000361246 IER5LQ5T953 404 aa19.59■□□□□ 0.73
CDC42BPB-201ENST00000361246 TSPAN33Q86UF1 283 aa19.59■□□□□ 0.73
CDC42BPB-201ENST00000361246 CD244Q9BZW8 370 aa19.59■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms