RNA–Protein interactions for RNA: ENST00000358918.7

APP-205, Transcript of amyloid beta precursor protein, humanhuman

TSL 5 BASIC

Gene APP, Length 2,366 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-205ENST00000358918 STK40Q8N2I9 435 aa13.86□□□□□ -0.19
APP-205ENST00000358918 CPA6Q8N4T0 437 aa13.86□□□□□ -0.19
APP-205ENST00000358918 BTN2A2Q8WVV5 523 aa13.86□□□□□ -0.19
APP-205ENST00000358918 SUSD3Q96L08 255 aa13.86□□□□□ -0.19
APP-205ENST00000358918 UROC1Q96N76 676 aa13.86□□□□□ -0.19
APP-205ENST00000358918 B3GNT2Q9NY97 397 aa13.86□□□□□ -0.19
APP-205ENST00000358918 OGDHLQ9ULD0 1010 aa13.86□□□□□ -0.19
APP-205ENST00000358918 ITM2BQ9Y287 266 aa13.86□□□□□ -0.19
APP-205ENST00000358918 PADI2Q9Y2J8 665 aa13.86□□□□□ -0.19
APP-205ENST00000358918 SH3D21A4FU49 640 aa13.85□□□□□ -0.19
APP-205ENST00000358918 FABP12A6NFH5 140 aa13.85□□□□□ -0.19
APP-205ENST00000358918 MAGEB17A8MXT2 336 aa13.85□□□□□ -0.19
APP-205ENST00000358918 ZNF670-ZNF695F2Z2N8 137 aa13.85□□□□□ -0.19
APP-205ENST00000358918 ARHGEF15O94989 841 aa13.85□□□□□ -0.19
APP-205ENST00000358918 CCNB2O95067 398 aa13.85□□□□□ -0.19
APP-205ENST00000358918 EPB42P16452 691 aa13.85□□□□□ -0.19
APP-205ENST00000358918 TACR1P25103 407 aa13.85□□□□□ -0.19
APP-205ENST00000358918 PTX3P26022 381 aaPredicted RBP13.85□□□□□ -0.19
APP-205ENST00000358918 RGS4P49798 205 aa13.85□□□□□ -0.19
APP-205ENST00000358918 YBEYP58557 167 aaPredicted RBP13.85□□□□□ -0.19
APP-205ENST00000358918 PCDH1Q08174 1060 aa13.85□□□□□ -0.19
APP-205ENST00000358918 VEPH1Q14D04 833 aa13.85□□□□□ -0.19
APP-205ENST00000358918 LARS2Q15031 903 aaKnown RBP13.85□□□□□ -0.19
APP-205ENST00000358918 TATDN3Q17R31 274 aa13.85□□□□□ -0.19
APP-205ENST00000358918 ZNF648Q5T619 568 aaPredicted RBP13.85□□□□□ -0.19
APP-205ENST00000358918 SAXO2Q658L1 398 aa13.85□□□□□ -0.19
APP-205ENST00000358918 GLB1LQ6UWU2 654 aa13.85□□□□□ -0.19
APP-205ENST00000358918 CCDC149Q6ZUS6 474 aa13.85□□□□□ -0.19
APP-205ENST00000358918 NLRP8Q86W28 1048 aa13.85□□□□□ -0.19
APP-205ENST00000358918 SPPL2AQ8TCT8 520 aa13.85□□□□□ -0.19
APP-205ENST00000358918 MARVELD3Q96A59 401 aa13.85□□□□□ -0.19
APP-205ENST00000358918 RPRD1AQ96P16 312 aaPredicted RBP13.85□□□□□ -0.19
APP-205ENST00000358918 GTPBP2Q9BX10 602 aaKnown RBP13.85□□□□□ -0.19
APP-205ENST00000358918 HHATLQ9HCP6 504 aa13.85□□□□□ -0.19
APP-205ENST00000358918 BPIFA1Q9NP55 256 aa13.85□□□□□ -0.19
APP-205ENST00000358918 ABCB9Q9NP78 766 aa13.85□□□□□ -0.19
APP-205ENST00000358918 RLIMQ9NVW2 624 aa13.85□□□□□ -0.19
APP-205ENST00000358918 CLN6Q9NWW5 311 aa13.85□□□□□ -0.19
APP-205ENST00000358918 VPS4AQ9UN37 437 aa13.85□□□□□ -0.19
APP-205ENST00000358918 TNFRSF10BO14763 440 aa13.85□□□□□ -0.19
APP-205ENST00000358918 SCAMP3O14828 347 aaKnown RBP13.85□□□□□ -0.19
APP-205ENST00000358918 SEC14L5O43304 696 aa13.85□□□□□ -0.19
APP-205ENST00000358918 TSPAN3O60637 253 aa13.85□□□□□ -0.19
APP-205ENST00000358918 ADRA2AP08913 450 aa13.85□□□□□ -0.19
APP-205ENST00000358918 TSPAN19P0C672 248 aa13.85□□□□□ -0.19
APP-205ENST00000358918 SDC1P18827 310 aa13.85□□□□□ -0.19
APP-205ENST00000358918 PSMA1P25786 263 aaKnown RBP13.85□□□□□ -0.19
APP-205ENST00000358918 HOXD10P28358 340 aa13.85□□□□□ -0.19
APP-205ENST00000358918 SOX3P41225 446 aa13.85□□□□□ -0.19
APP-205ENST00000358918 ARPP19P56211 112 aa13.85□□□□□ -0.19
APP-205ENST00000358918 CDC42P60953 191 aa13.85□□□□□ -0.19
APP-205ENST00000358918 PYDC2Q56P42 97 aa13.85□□□□□ -0.19
APP-205ENST00000358918 TOR2AQ5JU69 321 aa13.85□□□□□ -0.19
APP-205ENST00000358918 CLLU1OSQ5K130 101 aa13.85□□□□□ -0.19
APP-205ENST00000358918 LCN1P1Q5VSP4 162 aa13.85□□□□□ -0.19
APP-205ENST00000358918 ALG1LQ6GMV1 187 aa13.85□□□□□ -0.19
APP-205ENST00000358918 PTRHD1Q6GMV3 140 aaKnown RBP13.85□□□□□ -0.19
APP-205ENST00000358918 UBE2J2Q8N2K1 259 aa13.85□□□□□ -0.19
APP-205ENST00000358918 LINC01599Q8WXQ3 324 aa13.85□□□□□ -0.19
APP-205ENST00000358918 SMIM14Q96QK8 99 aa13.85□□□□□ -0.19
APP-205ENST00000358918 NIPSNAP1Q9BPW8 284 aa13.85□□□□□ -0.19
APP-205ENST00000358918 TRAF4Q9BUZ4 470 aaPredicted RBP13.85□□□□□ -0.19
APP-205ENST00000358918 P2RY12Q9H244 342 aa13.85□□□□□ -0.19
APP-205ENST00000358918 TLR8Q9NR97 1041 aaKnown RBP13.85□□□□□ -0.19
APP-205ENST00000358918 TMEM184CQ9NVA4 438 aa13.85□□□□□ -0.19
APP-205ENST00000358918 STUB1Q9UNE7 303 aa13.85□□□□□ -0.19
APP-205ENST00000358918 HSPB11Q9Y547 144 aa13.85□□□□□ -0.19
APP-205ENST00000358918 ALG5Q9Y673 324 aa13.85□□□□□ -0.19
APP-205ENST00000358918 CLDN9O95484 217 aa13.84□□□□□ -0.19
APP-205ENST00000358918 PDYNP01213 254 aa13.84□□□□□ -0.19
APP-205ENST00000358918 ZNF30P17039 623 aa13.84□□□□□ -0.19
APP-205ENST00000358918 FAM189BP81408 668 aa13.84□□□□□ -0.19
APP-205ENST00000358918 SPIBQ01892 262 aa13.84□□□□□ -0.19
APP-205ENST00000358918 HSPA14Q0VDF9 509 aa13.84□□□□□ -0.19
APP-205ENST00000358918 CPSF6Q16630 551 aaKnown RBP eCLIP13.84□□□□□ -0.19
APP-205ENST00000358918 DEFB115Q30KQ5 88 aa13.84□□□□□ -0.19
APP-205ENST00000358918 NADSYN1Q6IA69 706 aa13.84□□□□□ -0.19
APP-205ENST00000358918 SLC24A5Q71RS6 500 aa13.84□□□□□ -0.19
APP-205ENST00000358918 SPATA2LQ8IUW3 424 aaPredicted RBP13.84□□□□□ -0.19
APP-205ENST00000358918 SLC44A2Q8IWA5 706 aaPredicted RBP13.84□□□□□ -0.19
APP-205ENST00000358918 LGI4Q8N135 537 aa13.84□□□□□ -0.19
APP-205ENST00000358918 ZNF557Q8N988 423 aaPredicted RBP13.84□□□□□ -0.19
APP-205ENST00000358918 LRRC20Q8TCA0 184 aa13.84□□□□□ -0.19
APP-205ENST00000358918 GPR152Q8TDT2 470 aa13.84□□□□□ -0.19
APP-205ENST00000358918 SELENOMQ8WWX9 145 aa13.84□□□□□ -0.19
APP-205ENST00000358918 DIRAS2Q96HU8 199 aa13.84□□□□□ -0.19
APP-205ENST00000358918 NECTIN4Q96NY8 510 aa13.84□□□□□ -0.19
APP-205ENST00000358918 MGME1Q9BQP7 344 aa13.84□□□□□ -0.19
APP-205ENST00000358918 DOHHQ9BU89 302 aa13.84□□□□□ -0.19
APP-205ENST00000358918 TMEM39AQ9NV64 488 aa13.84□□□□□ -0.19
APP-205ENST00000358918 PRG3Q9Y2Y8 225 aaPredicted RBP13.84□□□□□ -0.19
APP-205ENST00000358918 GBF1Q92538 1859 aa13.84□□□□□ -0.19
APP-205ENST00000358918 PDPK1O15530 556 aa13.83□□□□□ -0.19
APP-205ENST00000358918 CYP17A1P05093 508 aa13.83□□□□□ -0.19
APP-205ENST00000358918 FHP07954 510 aa13.83□□□□□ -0.19
APP-205ENST00000358918 CTPS1P17812 591 aa13.83□□□□□ -0.19
APP-205ENST00000358918 ALAS2P22557 587 aa13.83□□□□□ -0.19
APP-205ENST00000358918 OR1G1P47890 313 aa13.83□□□□□ -0.19
APP-205ENST00000358918 TGM4P49221 684 aa13.83□□□□□ -0.19
APP-205ENST00000358918 MAPK12P53778 367 aa13.83□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms