RNA–Protein interactions for RNA: ENST00000358511.10

COL6A6-201, Transcript of collagen type VI alpha 6 chain, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL6A6, Length 9,581 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A6-201ENST00000358511 PCSK9Q8NBP7 692 aaKnown RBP8.5□□□□□ -1.05
COL6A6-201ENST00000358511 ASB4Q9Y574 426 aa8.5□□□□□ -1.05
COL6A6-201ENST00000358511 PLIN4Q96Q06 1357 aa8.5□□□□□ -1.05
COL6A6-201ENST00000358511 EIF1AYO14602 144 aaKnown RBP8.5□□□□□ -1.05
COL6A6-201ENST00000358511 TLR5O60602 858 aa8.5□□□□□ -1.05
COL6A6-201ENST00000358511 DIRAS1O95057 198 aa8.5□□□□□ -1.05
COL6A6-201ENST00000358511 C1RP00736 705 aa8.5□□□□□ -1.05
COL6A6-201ENST00000358511 TFP02787 698 aa8.5□□□□□ -1.05
COL6A6-201ENST00000358511 EIF1AXP47813 144 aaKnown RBP8.5□□□□□ -1.05
COL6A6-201ENST00000358511 CCDC58Q4VC31 144 aa8.5□□□□□ -1.05
COL6A6-201ENST00000358511 ATAD3CQ5T2N8 411 aa8.5□□□□□ -1.05
COL6A6-201ENST00000358511 FAM46CQ5VWP2 391 aa8.5□□□□□ -1.05
COL6A6-201ENST00000358511 GTF2IRD2BQ6EKJ0 949 aa8.5□□□□□ -1.05
COL6A6-201ENST00000358511 GALNT7Q86SF2 657 aa8.5□□□□□ -1.05
COL6A6-201ENST00000358511 GTF2IRD2Q86UP8 949 aa8.5□□□□□ -1.05
COL6A6-201ENST00000358511 SVBPQ8N300 66 aa8.5□□□□□ -1.05
COL6A6-201ENST00000358511 C1orf127Q8N9H9 656 aa8.5□□□□□ -1.05
COL6A6-201ENST00000358511 PSD4Q8NDX1 1056 aa8.5□□□□□ -1.05
COL6A6-201ENST00000358511 OR10Q1Q8NGQ4 319 aa8.5□□□□□ -1.05
COL6A6-201ENST00000358511 EIF5A2Q9GZV4 153 aaKnown RBP8.5□□□□□ -1.05
COL6A6-201ENST00000358511 RNF121Q9H920 327 aa8.5□□□□□ -1.05
COL6A6-201ENST00000358511 MGAT4BQ9UQ53 548 aa8.5□□□□□ -1.05
COL6A6-201ENST00000358511 TPRP12270 2363 aaKnown RBP8.5□□□□□ -1.05
COL6A6-201ENST00000358511 AGR2O95994 175 aa8.5□□□□□ -1.05
COL6A6-201ENST00000358511 OR12D2P58182 307 aa8.5□□□□□ -1.05
COL6A6-201ENST00000358511 IL10RBQ08334 325 aa8.5□□□□□ -1.05
COL6A6-201ENST00000358511 ATXN7L3Q14CW9 347 aaPredicted RBP8.5□□□□□ -1.05
COL6A6-201ENST00000358511 NTRK2Q16620 822 aa8.5□□□□□ -1.05
COL6A6-201ENST00000358511 PAQR3Q6TCH7 311 aa8.5□□□□□ -1.05
COL6A6-201ENST00000358511 COX18Q8N8Q8 333 aa8.5□□□□□ -1.05
COL6A6-201ENST00000358511 KIAA1191Q96A73 305 aa8.5□□□□□ -1.05
COL6A6-201ENST00000358511 EMID1Q96A84 441 aaPredicted RBP8.5□□□□□ -1.05
COL6A6-201ENST00000358511 PBDC1Q9BVG4 233 aa8.5□□□□□ -1.05
COL6A6-201ENST00000358511 ZNF510Q9Y2H8 683 aa8.5□□□□□ -1.05
COL6A6-201ENST00000358511 DIDO1Q9BTC0 2240 aaKnown RBP8.5□□□□□ -1.05
COL6A6-201ENST00000358511 A0A1W2PQL4 384 aaPredicted RBP8.5□□□□□ -1.05
COL6A6-201ENST00000358511 MEIOCA2RUB1 952 aa8.5□□□□□ -1.05
COL6A6-201ENST00000358511 C9IYK1 514 aa8.5□□□□□ -1.05
COL6A6-201ENST00000358511 IGFALSP35858 605 aa8.5□□□□□ -1.05
COL6A6-201ENST00000358511 LAPTM4AQ15012 233 aa8.5□□□□□ -1.05
COL6A6-201ENST00000358511 NPY5RQ15761 445 aa8.5□□□□□ -1.05
COL6A6-201ENST00000358511 PIM3Q86V86 326 aa8.5□□□□□ -1.05
COL6A6-201ENST00000358511 CFAP52Q8N1V2 620 aa8.5□□□□□ -1.05
COL6A6-201ENST00000358511 ESX1Q8N693 406 aa8.5□□□□□ -1.05
COL6A6-201ENST00000358511 GLIS1Q8NBF1 620 aa8.5□□□□□ -1.05
COL6A6-201ENST00000358511 OR2T35Q8NGX2 323 aa8.5□□□□□ -1.05
COL6A6-201ENST00000358511 ABHD16BQ9H3Z7 469 aa8.5□□□□□ -1.05
COL6A6-201ENST00000358511 A0A0G2JMP0 313 aa8.49□□□□□ -1.05
COL6A6-201ENST00000358511 F8W036 122 aa8.49□□□□□ -1.05
COL6A6-201ENST00000358511 RCBTB2O95199 551 aa8.49□□□□□ -1.05
COL6A6-201ENST00000358511 FUT4P22083 530 aa8.49□□□□□ -1.05
COL6A6-201ENST00000358511 BLOC1S1P78537 153 aa8.49□□□□□ -1.05
COL6A6-201ENST00000358511 ZNF155Q12901 538 aaPredicted RBP8.49□□□□□ -1.05
COL6A6-201ENST00000358511 SP140Q13342 867 aa8.49□□□□□ -1.05
COL6A6-201ENST00000358511 USP41Q3LFD5 358 aa8.49□□□□□ -1.05
COL6A6-201ENST00000358511 PRAMEF13Q5VWM6 474 aa8.49□□□□□ -1.05
COL6A6-201ENST00000358511 REEP3Q6NUK4 255 aa8.49□□□□□ -1.05
COL6A6-201ENST00000358511 TATDN1Q6P1N9 297 aa8.49□□□□□ -1.05
COL6A6-201ENST00000358511 BLOC1S3Q6QNY0 202 aa8.49□□□□□ -1.05
COL6A6-201ENST00000358511 OR4M2Q8NGB6 313 aa8.49□□□□□ -1.05
COL6A6-201ENST00000358511 OR14K1Q8NGZ2 314 aa8.49□□□□□ -1.05
COL6A6-201ENST00000358511 SSX3Q99909 188 aa8.49□□□□□ -1.05
COL6A6-201ENST00000358511 BORCS7-ASMTA0A0B4J1R7 106 aa8.49□□□□□ -1.05
COL6A6-201ENST00000358511 B4GALT5O43286 388 aa8.49□□□□□ -1.05
COL6A6-201ENST00000358511 GRK6P43250 576 aa8.49□□□□□ -1.05
COL6A6-201ENST00000358511 GAD2Q05329 585 aa8.49□□□□□ -1.05
COL6A6-201ENST00000358511 SPHARQ15513 63 aa8.49□□□□□ -1.05
COL6A6-201ENST00000358511 CEACAM20Q6UY09 585 aa8.49□□□□□ -1.05
COL6A6-201ENST00000358511 RD3Q7Z3Z2 195 aa8.49□□□□□ -1.05
COL6A6-201ENST00000358511 YIPF7Q8N8F6 280 aa8.49□□□□□ -1.05
COL6A6-201ENST00000358511 C2CD4AQ8NCU7 369 aaPredicted RBP8.49□□□□□ -1.05
COL6A6-201ENST00000358511 OR2L8Q8NGY9 312 aa8.49□□□□□ -1.05
COL6A6-201ENST00000358511 NFKBIDQ8NI38 313 aa8.49□□□□□ -1.05
COL6A6-201ENST00000358511 ZNF382Q96SR6 550 aa8.49□□□□□ -1.05
COL6A6-201ENST00000358511 TPT1P8Q9HAU6 139 aa8.49□□□□□ -1.05
COL6A6-201ENST00000358511 GIMAP1-GIMAP5A0A087WTJ2 511 aa8.49□□□□□ -1.05
COL6A6-201ENST00000358511 ICMTO60725 284 aa8.49□□□□□ -1.05
COL6A6-201ENST00000358511 PPP1R11O60927 126 aaPredicted RBP8.49□□□□□ -1.05
COL6A6-201ENST00000358511 RENP00797 406 aa8.49□□□□□ -1.05
COL6A6-201ENST00000358511 PRKXP51817 358 aa8.49□□□□□ -1.05
COL6A6-201ENST00000358511 MLLT6P55198 1093 aaPredicted RBP8.49□□□□□ -1.05
COL6A6-201ENST00000358511 TOR1AIP1Q5JTV8 583 aa8.49□□□□□ -1.05
COL6A6-201ENST00000358511 ATXN7L2Q5T6C5 722 aaPredicted RBP8.49□□□□□ -1.05
COL6A6-201ENST00000358511 NCBP2-AS2Q69YL0 99 aa8.49□□□□□ -1.05
COL6A6-201ENST00000358511 KCTD9Q7L273 389 aa8.49□□□□□ -1.05
COL6A6-201ENST00000358511 FBXO27Q8NI29 283 aa8.49□□□□□ -1.05
COL6A6-201ENST00000358511 NLKQ9UBE8 527 aa8.49□□□□□ -1.05
COL6A6-201ENST00000358511 SPATA31A1Q5TZJ5 1347 aa8.49□□□□□ -1.05
COL6A6-201ENST00000358511 BCL9O00512 1426 aa8.49□□□□□ -1.05
COL6A6-201ENST00000358511 SIGLEC1Q9BZZ2 1709 aa8.49□□□□□ -1.05
COL6A6-201ENST00000358511 A0A1B0GVM2 712 aa8.49□□□□□ -1.05
COL6A6-201ENST00000358511 BCAS1O75363 584 aaPredicted RBP8.49□□□□□ -1.05
COL6A6-201ENST00000358511 HMGCS1Q01581 520 aa8.49□□□□□ -1.05
COL6A6-201ENST00000358511 ZMIZ2Q8NF64 920 aa8.49□□□□□ -1.05
COL6A6-201ENST00000358511 ZFP90Q8TF47 636 aa8.49□□□□□ -1.05
COL6A6-201ENST00000358511 MYRFLQ96LU7 910 aa8.49□□□□□ -1.05
COL6A6-201ENST00000358511 ZNF649Q9BS31 505 aa8.49□□□□□ -1.05
COL6A6-201ENST00000358511 FBXL3Q9UKT7 428 aa8.49□□□□□ -1.05
COL6A6-201ENST00000358511 A0A1W2PQH9 124 aa8.49□□□□□ -1.05
COL6A6-201ENST00000358511 CARNS1A5YM72 827 aa8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms