RNA–Protein interactions for RNA: ENST00000357732.8

RTN4-204, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 2,390 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-204ENST00000357732 GPR83Q9NYM4 423 aa17.03■□□□□ 0.32
RTN4-204ENST00000357732 ATP6V1HQ9UI12 483 aa17.03■□□□□ 0.32
RTN4-204ENST00000357732 TNFRSF21O75509 655 aa17.03■□□□□ 0.32
RTN4-204ENST00000357732 GCM2O75603 506 aaPredicted RBP17.03■□□□□ 0.32
RTN4-204ENST00000357732 ANXA4P09525 319 aaPredicted RBP17.03■□□□□ 0.32
RTN4-204ENST00000357732 NUDT7P0C024 238 aa17.03■□□□□ 0.32
RTN4-204ENST00000357732 TIE1P35590 1138 aa17.03■□□□□ 0.32
RTN4-204ENST00000357732 IDH2P48735 452 aaKnown RBP17.03■□□□□ 0.32
RTN4-204ENST00000357732 E2F2Q14209 437 aa17.03■□□□□ 0.32
RTN4-204ENST00000357732 CCBE1Q6UXH8 406 aaPredicted RBP17.03■□□□□ 0.32
RTN4-204ENST00000357732 FAM92BQ6ZTR7 304 aa17.03■□□□□ 0.32
RTN4-204ENST00000357732 SLC30A8Q8IWU4 369 aa17.03■□□□□ 0.32
RTN4-204ENST00000357732 SLC43A3Q8NBI5 491 aa17.03■□□□□ 0.32
RTN4-204ENST00000357732 OR52N2Q8NGI0 321 aa17.03■□□□□ 0.32
RTN4-204ENST00000357732 GEMIN6Q8WXD5 167 aaKnown RBP17.03■□□□□ 0.32
RTN4-204ENST00000357732 FAM83CQ9BQN1 747 aa17.03■□□□□ 0.32
RTN4-204ENST00000357732 SUV39H2Q9H5I1 410 aa17.03■□□□□ 0.32
RTN4-204ENST00000357732 RAD18Q9NS91 495 aa17.03■□□□□ 0.32
RTN4-204ENST00000357732 LSM7Q9UK45 103 aaKnown RBP17.03■□□□□ 0.32
RTN4-204ENST00000357732 POU2F3Q9UKI9 436 aa17.03■□□□□ 0.32
RTN4-204ENST00000357732 BTBD3Q9Y2F9 522 aa17.03■□□□□ 0.32
RTN4-204ENST00000357732 MGAT4DA6NG13 374 aa17.02■□□□□ 0.32
RTN4-204ENST00000357732 A8MX80 341 aa17.02■□□□□ 0.32
RTN4-204ENST00000357732 SLCO2B1O94956 709 aa17.02■□□□□ 0.32
RTN4-204ENST00000357732 PTHP01270 115 aa17.02■□□□□ 0.32
RTN4-204ENST00000357732 STSP08842 583 aa17.02■□□□□ 0.32
RTN4-204ENST00000357732 ALOX12P18054 663 aa17.02■□□□□ 0.32
RTN4-204ENST00000357732 SPINT3P49223 89 aa17.02■□□□□ 0.32
RTN4-204ENST00000357732 RAE1P78406 368 aaKnown RBP17.02■□□□□ 0.32
RTN4-204ENST00000357732 SPIBQ01892 262 aa17.02■□□□□ 0.32
RTN4-204ENST00000357732 GAB1Q13480 694 aa17.02■□□□□ 0.32
RTN4-204ENST00000357732 DOC2AQ14183 400 aa17.02■□□□□ 0.32
RTN4-204ENST00000357732 GCNT6Q5T4J0 391 aa17.02■□□□□ 0.32
RTN4-204ENST00000357732 GDPGP1Q6ZNW5 385 aa17.02■□□□□ 0.32
RTN4-204ENST00000357732 HEATR4Q86WZ0 1026 aa17.02■□□□□ 0.32
RTN4-204ENST00000357732 KRT73Q86Y46 540 aa17.02■□□□□ 0.32
RTN4-204ENST00000357732 VRK3Q8IV63 474 aa17.02■□□□□ 0.32
RTN4-204ENST00000357732 SLC44A2Q8IWA5 706 aaPredicted RBP17.02■□□□□ 0.32
RTN4-204ENST00000357732 NAGSQ8N159 534 aa17.02■□□□□ 0.32
RTN4-204ENST00000357732 OXR1Q8N573 874 aa17.02■□□□□ 0.32
RTN4-204ENST00000357732 ADAMTS19Q8TE59 1207 aa17.02■□□□□ 0.32
RTN4-204ENST00000357732 TMCO6Q96DC7 493 aa17.02■□□□□ 0.32
RTN4-204ENST00000357732 NUAK2Q9H093 628 aa17.02■□□□□ 0.32
RTN4-204ENST00000357732 OR51E2Q9H255 320 aa17.02■□□□□ 0.32
RTN4-204ENST00000357732 STARD7Q9NQZ5 370 aa17.02■□□□□ 0.32
RTN4-204ENST00000357732 DUSP12Q9UNI6 340 aa17.02■□□□□ 0.32
RTN4-204ENST00000357732 HCN4Q9Y3Q4 1203 aa17.02■□□□□ 0.32
RTN4-204ENST00000357732 GRIP1Q9Y3R0 1128 aa17.02■□□□□ 0.32
RTN4-204ENST00000357732 LOC100506127A0A0U1RQW1 187 aa17.02■□□□□ 0.31
RTN4-204ENST00000357732 FAM47E-STBD1D6RA91 191 aa17.02■□□□□ 0.31
RTN4-204ENST00000357732 CCRL2O00421 344 aa17.02■□□□□ 0.31
RTN4-204ENST00000357732 PSIP1O75475 530 aaKnown RBP17.02■□□□□ 0.31
RTN4-204ENST00000357732 HLA-EP13747 358 aa17.02■□□□□ 0.31
RTN4-204ENST00000357732 TIA1P31483 386 aaKnown RBP eCLIP17.02■□□□□ 0.314e-8■■■□□ 16.3
RTN4-204ENST00000357732 GRK5P34947 590 aa17.02■□□□□ 0.31
RTN4-204ENST00000357732 LIMS1P48059 325 aa17.02■□□□□ 0.31
RTN4-204ENST00000357732 TM4SF4P48230 202 aa17.02■□□□□ 0.31
RTN4-204ENST00000357732 CRB2Q5IJ48 1285 aa17.02■□□□□ 0.31
RTN4-204ENST00000357732 AGAP6Q5VW22 663 aa17.02■□□□□ 0.31
RTN4-204ENST00000357732 CRIPAKQ8N1N5 446 aa17.02■□□□□ 0.31
RTN4-204ENST00000357732 FAM83FQ8NEG4 500 aaPredicted RBP17.02■□□□□ 0.31
RTN4-204ENST00000357732 ST13P5Q8NFI4 369 aaPredicted RBP17.02■□□□□ 0.31
RTN4-204ENST00000357732 OR4A15Q8NGL6 344 aa17.02■□□□□ 0.31
RTN4-204ENST00000357732 FIBINQ8TAL6 211 aa17.02■□□□□ 0.31
RTN4-204ENST00000357732 REPS1Q96D71 796 aa17.02■□□□□ 0.31
RTN4-204ENST00000357732 ZNF486Q96H40 463 aaPredicted RBP17.02■□□□□ 0.31
RTN4-204ENST00000357732 AGAP4Q96P64 663 aa17.02■□□□□ 0.31
RTN4-204ENST00000357732 TRNT1Q96Q11 434 aaKnown RBP17.02■□□□□ 0.31
RTN4-204ENST00000357732 CCM2Q9BSQ5 444 aa17.02■□□□□ 0.31
RTN4-204ENST00000357732 ATG10Q9H0Y0 220 aa17.02■□□□□ 0.31
RTN4-204ENST00000357732 BRD9Q9H8M2 597 aa17.02■□□□□ 0.31
RTN4-204ENST00000357732 EHD3Q9NZN3 535 aa17.02■□□□□ 0.31
RTN4-204ENST00000357732 CD72P21854 359 aa17.01■□□□□ 0.31
RTN4-204ENST00000357732 MVDP53602 400 aa17.01■□□□□ 0.31
RTN4-204ENST00000357732 ZNF630Q2M218 657 aaPredicted RBP17.01■□□□□ 0.31
RTN4-204ENST00000357732 MPPE1Q53F39 396 aa17.01■□□□□ 0.31
RTN4-204ENST00000357732 DGKKQ5KSL6 1271 aa17.01■□□□□ 0.31
RTN4-204ENST00000357732 DDX59Q5T1V6 619 aaKnown RBP eCLIP17.01■□□□□ 0.31
RTN4-204ENST00000357732 ZNF544Q6NX49 715 aa17.01■□□□□ 0.31
RTN4-204ENST00000357732 Q6ZPB1 254 aaPredicted RBP17.01■□□□□ 0.31
RTN4-204ENST00000357732 MMAAQ8IVH4 418 aaKnown RBP17.01■□□□□ 0.31
RTN4-204ENST00000357732 SYTL1Q8IYJ3 562 aa17.01■□□□□ 0.31
RTN4-204ENST00000357732 MTERF1Q99551 399 aaKnown RBP17.01■□□□□ 0.31
RTN4-204ENST00000357732 PIP5K1AQ99755 562 aa17.01■□□□□ 0.31
RTN4-204ENST00000357732 TSEN34Q9BSV6 310 aaKnown RBP17.01■□□□□ 0.31
RTN4-204ENST00000357732 CENPOQ9BU64 300 aa17.01■□□□□ 0.31
RTN4-204ENST00000357732 VN1R3Q9BXE9 311 aa17.01■□□□□ 0.31
RTN4-204ENST00000357732 TMEM184CQ9NVA4 438 aa17.01■□□□□ 0.31
RTN4-204ENST00000357732 KMOO15229 486 aa17.01■□□□□ 0.31
RTN4-204ENST00000357732 LHCGRP22888 699 aa17.01■□□□□ 0.31
RTN4-204ENST00000357732 CDH12P55289 794 aa17.01■□□□□ 0.31
RTN4-204ENST00000357732 EXOC3L2Q2M3D2 409 aa17.01■□□□□ 0.31
RTN4-204ENST00000357732 ZNF362Q5T0B9 420 aaPredicted RBP17.01■□□□□ 0.31
RTN4-204ENST00000357732 TRIM40Q6P9F5 258 aa17.01■□□□□ 0.31
RTN4-204ENST00000357732 GDPD3Q7L5L3 318 aa17.01■□□□□ 0.31
RTN4-204ENST00000357732 C1orf52Q8N6N3 182 aaKnown RBP17.01■□□□□ 0.31
RTN4-204ENST00000357732 IL17RDQ8NFM7 739 aa17.01■□□□□ 0.31
RTN4-204ENST00000357732 CDC26Q8NHZ8 85 aa17.01■□□□□ 0.31
RTN4-204ENST00000357732 VOPP1Q96AW1 172 aa17.01■□□□□ 0.31
RTN4-204ENST00000357732 TIFAQ96CG3 184 aa17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms