RNA–Protein interactions for RNA: ENST00000357654.7

BRCA1-203, Transcript of BRCA1, DNA repair associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BRCA1, Length 7,094 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-203ENST00000357654 Q6ZVU0 165 aa5.62□□□□□ -1.51
BRCA1-203ENST00000357654 DHDDSQ86SQ9 333 aa5.62□□□□□ -1.51
BRCA1-203ENST00000357654 SLCO6A1Q86UG4 719 aa5.62□□□□□ -1.51
BRCA1-203ENST00000357654 CILP2Q8IUL8 1156 aa5.62□□□□□ -1.51
BRCA1-203ENST00000357654 TUSC5Q8IXB3 177 aa5.62□□□□□ -1.51
BRCA1-203ENST00000357654 EID2Q8N6I1 236 aa5.62□□□□□ -1.51
BRCA1-203ENST00000357654 UBAC2Q8NBM4 344 aa5.62□□□□□ -1.51
BRCA1-203ENST00000357654 BPIFCQ8NFQ6 507 aa5.62□□□□□ -1.51
BRCA1-203ENST00000357654 DBF4BQ8NFT6 615 aa5.62□□□□□ -1.51
BRCA1-203ENST00000357654 ST8SIA2Q92186 375 aa5.62□□□□□ -1.51
BRCA1-203ENST00000357654 PYCR2Q96C36 320 aa5.62□□□□□ -1.51
BRCA1-203ENST00000357654 MRPL38Q96DV4 380 aaKnown RBP5.62□□□□□ -1.51
BRCA1-203ENST00000357654 OR5B12Q96R08 314 aa5.62□□□□□ -1.51
BRCA1-203ENST00000357654 SEMA4CQ9C0C4 833 aa5.62□□□□□ -1.51
BRCA1-203ENST00000357654 ISCUQ9H1K1 167 aa5.62□□□□□ -1.51
BRCA1-203ENST00000357654 SPAG4Q9NPE6 437 aa5.62□□□□□ -1.51
BRCA1-203ENST00000357654 NGBQ9NPG2 151 aa5.62□□□□□ -1.51
BRCA1-203ENST00000357654 PCDHGB7Q9Y5F8 929 aa5.62□□□□□ -1.51
BRCA1-203ENST00000357654 PCDHGA1Q9Y5H4 931 aa5.62□□□□□ -1.51
BRCA1-203ENST00000357654 SHISA7A6NL88 538 aa5.62□□□□□ -1.51
BRCA1-203ENST00000357654 H7C417 338 aa5.62□□□□□ -1.51
BRCA1-203ENST00000357654 LRRTM2O43300 516 aa5.62□□□□□ -1.51
BRCA1-203ENST00000357654 NUDT21O43809 227 aaKnown RBP5.62□□□□□ -1.51
BRCA1-203ENST00000357654 YIF1AO95070 293 aa5.62□□□□□ -1.51
BRCA1-203ENST00000357654 BCHEP06276 602 aa5.62□□□□□ -1.51
BRCA1-203ENST00000357654 HTR1AP08908 422 aa5.62□□□□□ -1.51
BRCA1-203ENST00000357654 CD72P21854 359 aa5.62□□□□□ -1.51
BRCA1-203ENST00000357654 BMXP51813 675 aa5.62□□□□□ -1.51
BRCA1-203ENST00000357654 GABREP78334 506 aa5.62□□□□□ -1.51
BRCA1-203ENST00000357654 VARS2Q5ST30 1063 aaKnown RBP5.62□□□□□ -1.51
BRCA1-203ENST00000357654 CLEC6AQ6EIG7 209 aa5.62□□□□□ -1.51
BRCA1-203ENST00000357654 AADACL2Q6P093 401 aa5.62□□□□□ -1.51
BRCA1-203ENST00000357654 BAIAP2L2Q6UXY1 529 aa5.62□□□□□ -1.51
BRCA1-203ENST00000357654 ERI1Q8IV48 349 aaKnown RBP5.62□□□□□ -1.51
BRCA1-203ENST00000357654 TSPEARQ8WU66 669 aa5.62□□□□□ -1.51
BRCA1-203ENST00000357654 CNOT9Q92600 299 aaKnown RBP5.62□□□□□ -1.51
BRCA1-203ENST00000357654 DLG3Q92796 817 aa5.62□□□□□ -1.51
BRCA1-203ENST00000357654 TMCO6Q96DC7 493 aa5.62□□□□□ -1.51
BRCA1-203ENST00000357654 C7orf34Q96L11 122 aa5.62□□□□□ -1.51
BRCA1-203ENST00000357654 BARD1Q99728 777 aaKnown RBP5.62□□□□□ -1.51
BRCA1-203ENST00000357654 MND1Q9BWT6 205 aa5.62□□□□□ -1.51
BRCA1-203ENST00000357654 RAB11FIP5Q9BXF6 653 aa5.62□□□□□ -1.51
BRCA1-203ENST00000357654 SLC29A3Q9BZD2 475 aa5.62□□□□□ -1.51
BRCA1-203ENST00000357654 ATG5Q9H1Y0 275 aa5.62□□□□□ -1.51
BRCA1-203ENST00000357654 LMAN1LQ9HAT1 526 aa5.62□□□□□ -1.51
BRCA1-203ENST00000357654 RLIMQ9NVW2 624 aa5.62□□□□□ -1.51
BRCA1-203ENST00000357654 GPATCH2Q9NW75 528 aa5.62□□□□□ -1.51
BRCA1-203ENST00000357654 APOBEC3BQ9UH17 382 aaKnown RBP5.62□□□□□ -1.51
BRCA1-203ENST00000357654 FZD10Q9ULW2 581 aa5.62□□□□□ -1.51
BRCA1-203ENST00000357654 REREQ9P2R6 1566 aa5.62□□□□□ -1.51
BRCA1-203ENST00000357654 TNS3Q68CZ2 1445 aa5.62□□□□□ -1.51
BRCA1-203ENST00000357654 PRAG1Q86YV5 1406 aa5.62□□□□□ -1.51
BRCA1-203ENST00000357654 A0A1W2PPK0 400 aa5.62□□□□□ -1.51
BRCA1-203ENST00000357654 A0A1W2PRV1 198 aa5.62□□□□□ -1.51
BRCA1-203ENST00000357654 RNASET2O00584 256 aaKnown RBP5.62□□□□□ -1.51
BRCA1-203ENST00000357654 TIMM8AO60220 97 aaPredicted RBP5.62□□□□□ -1.51
BRCA1-203ENST00000357654 FGF1P05230 155 aa5.62□□□□□ -1.51
BRCA1-203ENST00000357654 PAEPP09466 180 aa5.62□□□□□ -1.51
BRCA1-203ENST00000357654 POU3F2P20265 443 aaPredicted RBP5.62□□□□□ -1.51
BRCA1-203ENST00000357654 RBM34P42696 430 aaKnown RBP5.62□□□□□ -1.51
BRCA1-203ENST00000357654 AGFG1P52594 562 aaKnown RBP5.62□□□□□ -1.51
BRCA1-203ENST00000357654 PRKAA2P54646 552 aa5.62□□□□□ -1.51
BRCA1-203ENST00000357654 MRPS5P82675 430 aaKnown RBP5.62□□□□□ -1.51
BRCA1-203ENST00000357654 SF3B4Q15427 424 aaKnown RBP eCLIP5.62□□□□□ -1.512e-6■■■□□ 15.1
BRCA1-203ENST00000357654 ADGRF1Q5T601 910 aa5.62□□□□□ -1.51
BRCA1-203ENST00000357654 TSTD2Q5T7W7 516 aa5.62□□□□□ -1.51
BRCA1-203ENST00000357654 C9orf57Q5W0N0 161 aa5.62□□□□□ -1.51
BRCA1-203ENST00000357654 BBS12Q6ZW61 710 aa5.62□□□□□ -1.51
BRCA1-203ENST00000357654 MON1BQ7L1V2 547 aa5.62□□□□□ -1.51
BRCA1-203ENST00000357654 FBXW8Q8N3Y1 598 aa5.62□□□□□ -1.51
BRCA1-203ENST00000357654 PPM1HQ9ULR3 514 aa5.62□□□□□ -1.51
BRCA1-203ENST00000357654 ST14Q9Y5Y6 855 aa5.62□□□□□ -1.51
BRCA1-203ENST00000357654 PSAT1Q9Y617 370 aa5.62□□□□□ -1.51
BRCA1-203ENST00000357654 USP31Q70CQ4 1352 aa5.62□□□□□ -1.51
BRCA1-203ENST00000357654 TECPR2O15040 1411 aa5.62□□□□□ -1.51
BRCA1-203ENST00000357654 EDDM13A0A1B0GTR0 161 aa5.62□□□□□ -1.51
BRCA1-203ENST00000357654 HTR3BO95264 441 aa5.62□□□□□ -1.51
BRCA1-203ENST00000357654 ANXA3P12429 323 aa5.62□□□□□ -1.51
BRCA1-203ENST00000357654 PPIBP23284 216 aaKnown RBP5.62□□□□□ -1.51
BRCA1-203ENST00000357654 POLR2JP52435 117 aaKnown RBP5.62□□□□□ -1.51
BRCA1-203ENST00000357654 PSMA6P60900 246 aaKnown RBP5.62□□□□□ -1.51
BRCA1-203ENST00000357654 HSD11B2P80365 405 aa5.62□□□□□ -1.51
BRCA1-203ENST00000357654 HNF4GQ14541 408 aa5.62□□□□□ -1.51
BRCA1-203ENST00000357654 PRAMEF14Q5SWL7 426 aa5.62□□□□□ -1.51
BRCA1-203ENST00000357654 MRPL21Q7Z2W9 205 aaKnown RBP5.62□□□□□ -1.51
BRCA1-203ENST00000357654 PIGWQ7Z7B1 504 aa5.62□□□□□ -1.51
BRCA1-203ENST00000357654 OR4N5Q8IXE1 308 aa5.62□□□□□ -1.51
BRCA1-203ENST00000357654 FUKQ8N0W3 1084 aa5.62□□□□□ -1.51
BRCA1-203ENST00000357654 FMR1NBQ8N0W7 255 aaPredicted RBP5.62□□□□□ -1.51
BRCA1-203ENST00000357654 TOP6BLQ8N6T0 577 aa5.62□□□□□ -1.51
BRCA1-203ENST00000357654 SLC22A17Q8WUG5 538 aa5.62□□□□□ -1.51
BRCA1-203ENST00000357654 RGMAQ96B86 450 aa5.62□□□□□ -1.51
BRCA1-203ENST00000357654 ZBED6CLQ96FA7 236 aaPredicted RBP5.62□□□□□ -1.51
BRCA1-203ENST00000357654 CASD1Q96PB1 797 aa5.62□□□□□ -1.51
BRCA1-203ENST00000357654 CDK15Q96Q40 435 aa5.62□□□□□ -1.51
BRCA1-203ENST00000357654 HERC2P3Q9BVR0 1158 aa5.62□□□□□ -1.51
BRCA1-203ENST00000357654 GSTO2Q9H4Y5 243 aa5.62□□□□□ -1.51
BRCA1-203ENST00000357654 ZNF395Q9H8N7 513 aaPredicted RBP5.62□□□□□ -1.51
BRCA1-203ENST00000357654 HMGXB4Q9UGU5 601 aa5.62□□□□□ -1.51
BRCA1-203ENST00000357654 CYP3A7-CYP3A51PA0A087WV96 503 aa5.62□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms