RNA–Protein interactions for RNA: ENST00000357250.10

COL9A1-202, Transcript of collagen type IX alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL9A1, Length 4,761 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-202ENST00000357250 IL4I1Q96RQ9 567 aa11.36□□□□□ -0.59
COL9A1-202ENST00000357250 FAM83CQ9BQN1 747 aa11.36□□□□□ -0.59
COL9A1-202ENST00000357250 DPAGT1Q9H3H5 408 aa11.36□□□□□ -0.59
COL9A1-202ENST00000357250 SLC2A4RGQ9NR83 387 aa11.36□□□□□ -0.59
COL9A1-202ENST00000357250 AIG1Q9NVV5 245 aa11.36□□□□□ -0.59
COL9A1-202ENST00000357250 CACNA1SQ13698 1873 aa11.36□□□□□ -0.59
COL9A1-202ENST00000357250 IGKV6D-21A0A0A0MT36 114 aa11.36□□□□□ -0.59
COL9A1-202ENST00000357250 SAP18O00422 153 aaKnown RBP11.36□□□□□ -0.59
COL9A1-202ENST00000357250 NOS1APO75052 506 aaPredicted RBP11.36□□□□□ -0.59
COL9A1-202ENST00000357250 PDX1P52945 283 aa11.36□□□□□ -0.59
COL9A1-202ENST00000357250 ZNF45Q02386 682 aa11.36□□□□□ -0.59
COL9A1-202ENST00000357250 WSCD2Q2TBF2 565 aa11.36□□□□□ -0.59
COL9A1-202ENST00000357250 RUNDC3AQ59EK9 446 aa11.36□□□□□ -0.59
COL9A1-202ENST00000357250 RNASE12Q5GAN4 147 aaKnown RBP11.36□□□□□ -0.59
COL9A1-202ENST00000357250 RABL3Q5HYI8 236 aa11.36□□□□□ -0.59
COL9A1-202ENST00000357250 LRRC73Q5JTD7 316 aa11.36□□□□□ -0.59
COL9A1-202ENST00000357250 TOR1AIP1Q5JTV8 583 aa11.36□□□□□ -0.59
COL9A1-202ENST00000357250 SHQ1Q6PI26 577 aaKnown RBP11.36□□□□□ -0.59
COL9A1-202ENST00000357250 ZNF280BQ86YH2 543 aa11.36□□□□□ -0.59
COL9A1-202ENST00000357250 MARVELD2Q8N4S9 558 aa11.36□□□□□ -0.59
COL9A1-202ENST00000357250 OR5T3Q8NGG3 340 aa11.36□□□□□ -0.59
COL9A1-202ENST00000357250 OR52E4Q8NGH9 312 aa11.36□□□□□ -0.59
COL9A1-202ENST00000357250 FAM110BQ8TC76 370 aa11.36□□□□□ -0.59
COL9A1-202ENST00000357250 MAGIXQ9H6Y5 334 aa11.36□□□□□ -0.59
COL9A1-202ENST00000357250 RNF6Q9Y252 685 aa11.36□□□□□ -0.59
COL9A1-202ENST00000357250 NAV1Q8NEY1 1877 aa11.36□□□□□ -0.59
COL9A1-202ENST00000357250 SCDO00767 359 aa11.36□□□□□ -0.59
COL9A1-202ENST00000357250 EEDO75530 441 aaKnown RBP11.36□□□□□ -0.59
COL9A1-202ENST00000357250 ZNF20P17024 532 aa11.36□□□□□ -0.59
COL9A1-202ENST00000357250 AHCYP23526 432 aa11.36□□□□□ -0.59
COL9A1-202ENST00000357250 PGDP52209 483 aa11.36□□□□□ -0.59
COL9A1-202ENST00000357250 RPS13P62277 151 aaKnown RBP11.36□□□□□ -0.59
COL9A1-202ENST00000357250 PUM1Q14671 1186 aaKnown RBP eCLIP11.36□□□□□ -0.59
COL9A1-202ENST00000357250 MAPK14Q16539 360 aa11.36□□□□□ -0.59
COL9A1-202ENST00000357250 INAVAQ3KP66 663 aa11.36□□□□□ -0.59
COL9A1-202ENST00000357250 GID4Q8IVV7 300 aa11.36□□□□□ -0.59
COL9A1-202ENST00000357250 TOMM5Q8N4H5 51 aa11.36□□□□□ -0.59
COL9A1-202ENST00000357250 TSTD1Q8NFU3 115 aa11.36□□□□□ -0.59
COL9A1-202ENST00000357250 MRGPRX2Q96LB1 330 aa11.36□□□□□ -0.59
COL9A1-202ENST00000357250 HERPUD2Q9BSE4 406 aa11.36□□□□□ -0.59
COL9A1-202ENST00000357250 TOR3AQ9H497 397 aa11.36□□□□□ -0.59
COL9A1-202ENST00000357250 TBC1D24Q9ULP9 559 aa11.36□□□□□ -0.59
COL9A1-202ENST00000357250 KCTD3Q9Y597 815 aa11.36□□□□□ -0.59
COL9A1-202ENST00000357250 SLX4Q8IY92 1834 aa11.36□□□□□ -0.59
COL9A1-202ENST00000357250 TOR1BO14657 336 aa11.36□□□□□ -0.59
COL9A1-202ENST00000357250 GRID2O43424 1007 aa11.36□□□□□ -0.59
COL9A1-202ENST00000357250 RBMXL2O75526 392 aaKnown RBP11.36□□□□□ -0.59
COL9A1-202ENST00000357250 IFNA7P01567 189 aa11.36□□□□□ -0.59
COL9A1-202ENST00000357250 CHRNA1P02708 482 aa11.36□□□□□ -0.59
COL9A1-202ENST00000357250 EPCAMP16422 314 aa11.36□□□□□ -0.59
COL9A1-202ENST00000357250 SEC13P55735 322 aa11.36□□□□□ -0.59
COL9A1-202ENST00000357250 GPR68Q15743 365 aa11.36□□□□□ -0.59
COL9A1-202ENST00000357250 NOXRED1Q6NXP6 359 aa11.36□□□□□ -0.59
COL9A1-202ENST00000357250 ZNF367Q7RTV3 350 aa11.36□□□□□ -0.59
COL9A1-202ENST00000357250 ZNF548Q8NEK5 533 aaPredicted RBP11.36□□□□□ -0.59
COL9A1-202ENST00000357250 SNIP1Q8TAD8 396 aaKnown RBP11.36□□□□□ -0.59
COL9A1-202ENST00000357250 CEP76Q8TAP6 659 aa11.36□□□□□ -0.59
COL9A1-202ENST00000357250 GNPDA2Q8TDQ7 276 aa11.36□□□□□ -0.59
COL9A1-202ENST00000357250 SETD7Q8WTS6 366 aaKnown RBP11.36□□□□□ -0.59
COL9A1-202ENST00000357250 BHLHE41Q9C0J9 482 aaPredicted RBP11.36□□□□□ -0.59
COL9A1-202ENST00000357250 AMBNQ9NP70 447 aa11.36□□□□□ -0.59
COL9A1-202ENST00000357250 ST6GALNAC1Q9NSC7 600 aaPredicted RBP11.36□□□□□ -0.59
COL9A1-202ENST00000357250 DZANK1Q9NVP4 752 aa11.36□□□□□ -0.59
COL9A1-202ENST00000357250 FKBP14Q9NWM8 211 aa11.36□□□□□ -0.59
COL9A1-202ENST00000357250 ADAMTS5Q9UNA0 930 aa11.36□□□□□ -0.59
COL9A1-202ENST00000357250 TMA7Q9Y2S6 64 aaKnown RBP11.36□□□□□ -0.59
COL9A1-202ENST00000357250 TOGARAM1Q9Y4F4 1720 aa11.36□□□□□ -0.59
COL9A1-202ENST00000357250 MYH15Q9Y2K3 1946 aa11.36□□□□□ -0.59
COL9A1-202ENST00000357250 ZNF726A6NNF4 738 aa11.35□□□□□ -0.59
COL9A1-202ENST00000357250 H3BSA7 217 aa11.35□□□□□ -0.59
COL9A1-202ENST00000357250 BDKRB1P46663 353 aa11.35□□□□□ -0.59
COL9A1-202ENST00000357250 VLDLRP98155 873 aa11.35□□□□□ -0.59
COL9A1-202ENST00000357250 CSTF1Q05048 431 aaKnown RBP11.35□□□□□ -0.59
COL9A1-202ENST00000357250 SFT2D3Q587I9 215 aa11.35□□□□□ -0.59
COL9A1-202ENST00000357250 COLEC12Q5KU26 742 aa11.35□□□□□ -0.59
COL9A1-202ENST00000357250 PGBD2Q6P3X8 592 aa11.35□□□□□ -0.59
COL9A1-202ENST00000357250 STX12Q86Y82 276 aa11.35□□□□□ -0.59
COL9A1-202ENST00000357250 PLD6Q8N2A8 252 aaKnown RBP11.35□□□□□ -0.59
COL9A1-202ENST00000357250 FKBP10Q96AY3 582 aa11.35□□□□□ -0.59
COL9A1-202ENST00000357250 C12orf43Q96C57 262 aaKnown RBP11.35□□□□□ -0.59
COL9A1-202ENST00000357250 PGAP3Q96FM1 320 aaPredicted RBP11.35□□□□□ -0.59
COL9A1-202ENST00000357250 SAMD11Q96NU1 681 aa11.35□□□□□ -0.59
COL9A1-202ENST00000357250 STRA6Q9BX79 667 aa11.35□□□□□ -0.59
COL9A1-202ENST00000357250 TAS2R9Q9NYW1 312 aa11.35□□□□□ -0.59
COL9A1-202ENST00000357250 DLGAP4Q9Y2H0 992 aa11.35□□□□□ -0.59
COL9A1-202ENST00000357250 LEFTY2O00292 366 aa11.35□□□□□ -0.59
COL9A1-202ENST00000357250 VEGFDO43915 354 aa11.35□□□□□ -0.59
COL9A1-202ENST00000357250 RASAL1O95294 804 aa11.35□□□□□ -0.59
COL9A1-202ENST00000357250 PSKH1P11801 424 aa11.35□□□□□ -0.59
COL9A1-202ENST00000357250 AGXTP21549 392 aa11.35□□□□□ -0.59
COL9A1-202ENST00000357250 GLDCP23378 1020 aa11.35□□□□□ -0.59
COL9A1-202ENST00000357250 GADD45AP24522 165 aa11.35□□□□□ -0.59
COL9A1-202ENST00000357250 ECHS1P30084 290 aa11.35□□□□□ -0.59
COL9A1-202ENST00000357250 TMEM115Q12893 351 aaPredicted RBP11.35□□□□□ -0.59
COL9A1-202ENST00000357250 AKIRIN2Q53H80 203 aa11.35□□□□□ -0.59
COL9A1-202ENST00000357250 ZNF805Q5CZA5 627 aa11.35□□□□□ -0.59
COL9A1-202ENST00000357250 METTL2BQ6P1Q9 378 aaKnown RBP11.35□□□□□ -0.59
COL9A1-202ENST00000357250 IGSF21Q96ID5 467 aa11.35□□□□□ -0.59
COL9A1-202ENST00000357250 GFM1Q96RP9 751 aaKnown RBP11.35□□□□□ -0.59
COL9A1-202ENST00000357250 DPYSL5Q9BPU6 564 aa11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms