RNA–Protein interactions for RNA: ENST00000357085.4

TRIM38-201, Transcript of tripartite motif containing 38, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM38, Length 9,413 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM38-201ENST00000357085 SLC6A16Q9GZN6 736 aa6.36□□□□□ -1.39
TRIM38-201ENST00000357085 TKTL2Q9H0I9 626 aa6.36□□□□□ -1.39
TRIM38-201ENST00000357085 SMOC2Q9H3U7 446 aa6.36□□□□□ -1.39
TRIM38-201ENST00000357085 ARL15Q9NXU5 204 aa6.36□□□□□ -1.39
TRIM38-201ENST00000357085 LSM7Q9UK45 103 aaKnown RBP6.36□□□□□ -1.39
TRIM38-201ENST00000357085 SPACA6W5XKT8 324 aa6.36□□□□□ -1.39
TRIM38-201ENST00000357085 TMEM150BA6NC51 233 aa6.36□□□□□ -1.39
TRIM38-201ENST00000357085 METTL15A6NJ78 407 aa6.36□□□□□ -1.39
TRIM38-201ENST00000357085 WASHC1A8K0Z3 465 aa6.36□□□□□ -1.39
TRIM38-201ENST00000357085 ISM1B1AKI9 464 aa6.36□□□□□ -1.39
TRIM38-201ENST00000357085 SGK494L7N484 410 aa6.36□□□□□ -1.39
TRIM38-201ENST00000357085 TSPAN8P19075 237 aa6.36□□□□□ -1.39
TRIM38-201ENST00000357085 HDCP19113 662 aa6.36□□□□□ -1.39
TRIM38-201ENST00000357085 AGXTP21549 392 aa6.36□□□□□ -1.39
TRIM38-201ENST00000357085 POLR2LP62875 67 aaKnown RBP6.36□□□□□ -1.39
TRIM38-201ENST00000357085 GGTA1PQ4G0N0 100 aa6.36□□□□□ -1.39
TRIM38-201ENST00000357085 HBMQ6B0K9 141 aa6.36□□□□□ -1.39
TRIM38-201ENST00000357085 DEF8Q6ZN54 512 aa6.36□□□□□ -1.39
TRIM38-201ENST00000357085 GDPD3Q7L5L3 318 aa6.36□□□□□ -1.39
TRIM38-201ENST00000357085 WDR53Q7Z5U6 358 aaPredicted RBP6.36□□□□□ -1.39
TRIM38-201ENST00000357085 OR5B17Q8NGF7 314 aa6.36□□□□□ -1.39
TRIM38-201ENST00000357085 RBPMSQ93062 196 aaKnown RBP6.36□□□□□ -1.39
TRIM38-201ENST00000357085 AGO3Q9H9G7 860 aaKnown RBP6.36□□□□□ -1.39
TRIM38-201ENST00000357085 APOBEC3GQ9HC16 384 aaKnown RBP6.36□□□□□ -1.39
TRIM38-201ENST00000357085 FBXW11Q9UKB1 542 aa6.36□□□□□ -1.39
TRIM38-201ENST00000357085 HCN2Q9UL51 889 aa6.36□□□□□ -1.39
TRIM38-201ENST00000357085 TCRBV5S1A1TA0A578 114 aa6.36□□□□□ -1.39
TRIM38-201ENST00000357085 OR5F1O95221 314 aa6.36□□□□□ -1.39
TRIM38-201ENST00000357085 C1RP00736 705 aa6.36□□□□□ -1.39
TRIM38-201ENST00000357085 ALPPP05187 535 aa6.36□□□□□ -1.39
TRIM38-201ENST00000357085 EBLN1P0CF75 366 aa6.36□□□□□ -1.39
TRIM38-201ENST00000357085 GPX3P22352 226 aa6.36□□□□□ -1.39
TRIM38-201ENST00000357085 HK3P52790 923 aa6.36□□□□□ -1.39
TRIM38-201ENST00000357085 C6orf136Q5SQH8 315 aa6.36□□□□□ -1.39
TRIM38-201ENST00000357085 RETSATQ6NUM9 610 aa6.36□□□□□ -1.39
TRIM38-201ENST00000357085 SLC39A4Q6P5W5 647 aa6.36□□□□□ -1.39
TRIM38-201ENST00000357085 CORO6Q6QEF8 472 aa6.36□□□□□ -1.39
TRIM38-201ENST00000357085 AP5M1Q9H0R1 490 aa6.36□□□□□ -1.39
TRIM38-201ENST00000357085 IFT46Q9NQC8 304 aa6.36□□□□□ -1.39
TRIM38-201ENST00000357085 KCTD5Q9NXV2 234 aa6.36□□□□□ -1.39
TRIM38-201ENST00000357085 RGS9O75916 674 aaPredicted RBP6.36□□□□□ -1.39
TRIM38-201ENST00000357085 S100A2P29034 98 aa6.36□□□□□ -1.39
TRIM38-201ENST00000357085 BMPR1AP36894 532 aa6.36□□□□□ -1.39
TRIM38-201ENST00000357085 EPHA4P54764 986 aa6.36□□□□□ -1.39
TRIM38-201ENST00000357085 MXD1Q05195 221 aa6.36□□□□□ -1.39
TRIM38-201ENST00000357085 PLEKHN1Q494U1 663 aaPredicted RBP6.36□□□□□ -1.39
TRIM38-201ENST00000357085 C9orf57Q5W0N0 161 aa6.36□□□□□ -1.39
TRIM38-201ENST00000357085 SPATC1Q76KD6 591 aa6.36□□□□□ -1.39
TRIM38-201ENST00000357085 ZFP57Q9NU63 452 aa6.36□□□□□ -1.39
TRIM38-201ENST00000357085 PADI2Q9Y2J8 665 aa6.36□□□□□ -1.39
TRIM38-201ENST00000357085 ZNF670-ZNF695F2Z2N8 137 aa6.36□□□□□ -1.39
TRIM38-201ENST00000357085 AGRPO00253 132 aa6.36□□□□□ -1.39
TRIM38-201ENST00000357085 PLATP00750 562 aa6.36□□□□□ -1.39
TRIM38-201ENST00000357085 CSF1P09603 554 aa6.36□□□□□ -1.39
TRIM38-201ENST00000357085 BDNFP23560 247 aa6.36□□□□□ -1.39
TRIM38-201ENST00000357085 XKP51811 444 aa6.36□□□□□ -1.39
TRIM38-201ENST00000357085 GK2Q14410 553 aaPredicted RBP6.36□□□□□ -1.39
TRIM38-201ENST00000357085 FGFBP1Q14512 234 aa6.36□□□□□ -1.39
TRIM38-201ENST00000357085 GTF2IRD2BQ6EKJ0 949 aa6.36□□□□□ -1.39
TRIM38-201ENST00000357085 ZNF783Q6ZMS7 281 aa6.36□□□□□ -1.39
TRIM38-201ENST00000357085 GTF2IRD2Q86UP8 949 aa6.36□□□□□ -1.39
TRIM38-201ENST00000357085 LGI4Q8N135 537 aa6.36□□□□□ -1.39
TRIM38-201ENST00000357085 GPR151Q8TDV0 419 aa6.36□□□□□ -1.39
TRIM38-201ENST00000357085 SLC16A10Q8TF71 515 aa6.36□□□□□ -1.39
TRIM38-201ENST00000357085 COQ10AQ96MF6 247 aa6.36□□□□□ -1.39
TRIM38-201ENST00000357085 TMEM74Q96NL1 305 aa6.36□□□□□ -1.39
TRIM38-201ENST00000357085 MUC3BQ9H195 1237 aa6.36□□□□□ -1.39
TRIM38-201ENST00000357085 CDT1Q9H211 546 aa6.36□□□□□ -1.39
TRIM38-201ENST00000357085 ARNT2Q9HBZ2 717 aa6.36□□□□□ -1.39
TRIM38-201ENST00000357085 RNF215Q9Y6U7 377 aa6.36□□□□□ -1.39
TRIM38-201ENST00000357085 GUCA1CO95843 209 aa6.36□□□□□ -1.39
TRIM38-201ENST00000357085 TCF3P15923 654 aa6.36□□□□□ -1.39
TRIM38-201ENST00000357085 GPR85P60893 370 aa6.36□□□□□ -1.39
TRIM38-201ENST00000357085 ZNF252P-AS1Q0IIN9 211 aa6.36□□□□□ -1.39
TRIM38-201ENST00000357085 TWF1Q12792 350 aa6.36□□□□□ -1.39
TRIM38-201ENST00000357085 TNK1Q13470 666 aa6.36□□□□□ -1.39
TRIM38-201ENST00000357085 ARHGEF7Q14155 803 aa6.36□□□□□ -1.39
TRIM38-201ENST00000357085 EML3Q32P44 896 aa6.36□□□□□ -1.39
TRIM38-201ENST00000357085 SLC16A12Q6ZSM3 486 aa6.36□□□□□ -1.39
TRIM38-201ENST00000357085 DNAJC22Q8N4W6 341 aa6.36□□□□□ -1.39
TRIM38-201ENST00000357085 LINC00116Q8NCU8 138 aa6.36□□□□□ -1.39
TRIM38-201ENST00000357085 TTLQ8NG68 377 aa6.36□□□□□ -1.39
TRIM38-201ENST00000357085 ZNF384Q8TF68 577 aa6.36□□□□□ -1.39
TRIM38-201ENST00000357085 FCRL1Q96LA6 429 aa6.36□□□□□ -1.39
TRIM38-201ENST00000357085 LRFN5Q96NI6 719 aa6.36□□□□□ -1.39
TRIM38-201ENST00000357085 TREX1Q9NSU2 369 aa6.36□□□□□ -1.39
TRIM38-201ENST00000357085 FNDC3AQ9Y2H6 1198 aaKnown RBP6.36□□□□□ -1.39
TRIM38-201ENST00000357085 HRH3Q9Y5N1 445 aa6.36□□□□□ -1.39
TRIM38-201ENST00000357085 STK25O00506 426 aa6.35□□□□□ -1.39
TRIM38-201ENST00000357085 CASC3O15234 703 aaKnown RBP6.35□□□□□ -1.39
TRIM38-201ENST00000357085 ECI2O75521 394 aa6.35□□□□□ -1.39
TRIM38-201ENST00000357085 CATP04040 527 aaKnown RBP6.35□□□□□ -1.39
TRIM38-201ENST00000357085 CFHP08603 1231 aa6.35□□□□□ -1.39
TRIM38-201ENST00000357085 NMBRP28336 390 aa6.35□□□□□ -1.39
TRIM38-201ENST00000357085 ARFIP1P53367 373 aa6.35□□□□□ -1.39
TRIM38-201ENST00000357085 C1QTNF8P60827 252 aa6.35□□□□□ -1.39
TRIM38-201ENST00000357085 TAP2Q03519 686 aa6.35□□□□□ -1.39
TRIM38-201ENST00000357085 CRTC2Q53ET0 693 aaPredicted RBP6.35□□□□□ -1.39
TRIM38-201ENST00000357085 REEP3Q6NUK4 255 aa6.35□□□□□ -1.39
TRIM38-201ENST00000357085 PGBD3Q8N328 593 aa6.35□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms