RNA–Protein interactions for RNA: ENST00000357008.6

CHD4-201, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CHD4, Length 6,496 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-201ENST00000357008 NRIP1P48552 1158 aa14.37□□□□□ -0.11
CHD4-201ENST00000357008 TRAM2Q15035 370 aa14.37□□□□□ -0.11
CHD4-201ENST00000357008 ZMYND11Q15326 602 aa14.37□□□□□ -0.11
CHD4-201ENST00000357008 ALG1LQ6GMV1 187 aa14.37□□□□□ -0.11
CHD4-201ENST00000357008 ANKFN1Q8N957 763 aa14.37□□□□□ -0.11
CHD4-201ENST00000357008 DEFB118Q96PH6 123 aa14.37□□□□□ -0.11
CHD4-201ENST00000357008 A0A096LPI6 279 aa14.37□□□□□ -0.11
CHD4-201ENST00000357008 M0R036 132 aa14.37□□□□□ -0.11
CHD4-201ENST00000357008 FBP2O00757 339 aa14.37□□□□□ -0.11
CHD4-201ENST00000357008 COQ9O75208 318 aa14.37□□□□□ -0.11
CHD4-201ENST00000357008 PVALBP20472 110 aaPredicted RBP14.37□□□□□ -0.11
CHD4-201ENST00000357008 RPS13P62277 151 aaKnown RBP14.37□□□□□ -0.11
CHD4-201ENST00000357008 ALKBH2Q6NS38 261 aa14.37□□□□□ -0.11
CHD4-201ENST00000357008 CEP97Q8IW35 865 aa14.37□□□□□ -0.11
CHD4-201ENST00000357008 SHKBP1Q8TBC3 707 aa14.37□□□□□ -0.11
CHD4-201ENST00000357008 LGALS12Q96DT0 336 aa14.37□□□□□ -0.11
CHD4-201ENST00000357008 TTYH2Q9BSA4 534 aa14.37□□□□□ -0.11
CHD4-201ENST00000357008 ADAM7Q9H2U9 754 aa14.37□□□□□ -0.11
CHD4-201ENST00000357008 CCSER2Q9H7U1 834 aa14.37□□□□□ -0.11
CHD4-201ENST00000357008 CD93Q9NPY3 652 aa14.37□□□□□ -0.11
CHD4-201ENST00000357008 TMEM5Q9Y2B1 443 aa14.37□□□□□ -0.11
CHD4-201ENST00000357008 TCHHQ07283 1943 aa14.37□□□□□ -0.11
CHD4-201ENST00000357008 NDUFS4O43181 175 aa14.37□□□□□ -0.11
CHD4-201ENST00000357008 KDELR3O43731 214 aa14.37□□□□□ -0.11
CHD4-201ENST00000357008 ACP5P13686 325 aa14.37□□□□□ -0.11
CHD4-201ENST00000357008 BDKRB1P46663 353 aa14.37□□□□□ -0.11
CHD4-201ENST00000357008 MAN2A2P49641 1150 aa14.37□□□□□ -0.11
CHD4-201ENST00000357008 CREB5Q02930 508 aa14.37□□□□□ -0.11
CHD4-201ENST00000357008 CEACAM7Q14002 265 aa14.37□□□□□ -0.11
CHD4-201ENST00000357008 KCNC3Q14003 757 aa14.37□□□□□ -0.11
CHD4-201ENST00000357008 UGT8Q16880 541 aa14.37□□□□□ -0.11
CHD4-201ENST00000357008 HACD2Q6Y1H2 254 aa14.37□□□□□ -0.11
CHD4-201ENST00000357008 GNPDA2Q8TDQ7 276 aa14.37□□□□□ -0.11
CHD4-201ENST00000357008 HERC2P3Q9BVR0 1158 aa14.37□□□□□ -0.11
CHD4-201ENST00000357008 OR2B2Q9GZK3 357 aa14.37□□□□□ -0.11
CHD4-201ENST00000357008 TMEM248Q9NWD8 314 aa14.37□□□□□ -0.11
CHD4-201ENST00000357008 SCP2D1Q9UJQ7 156 aa14.37□□□□□ -0.11
CHD4-201ENST00000357008 GNG8Q9UK08 70 aa14.37□□□□□ -0.11
CHD4-201ENST00000357008 MYOCOSA0A1B0GUC4 107 aa14.36□□□□□ -0.11
CHD4-201ENST00000357008 ZNF878C9JN71 531 aa14.36□□□□□ -0.11
CHD4-201ENST00000357008 KCNE1P15382 129 aa14.36□□□□□ -0.11
CHD4-201ENST00000357008 LHCGRP22888 699 aa14.36□□□□□ -0.11
CHD4-201ENST00000357008 ZNF763Q0D2J5 394 aa14.36□□□□□ -0.11
CHD4-201ENST00000357008 MAD2L1BPQ15013 274 aaPredicted RBP14.36□□□□□ -0.11
CHD4-201ENST00000357008 RNF130Q86XS8 419 aa14.36□□□□□ -0.11
CHD4-201ENST00000357008 PIAS4Q8N2W9 510 aaPredicted RBP14.36□□□□□ -0.11
CHD4-201ENST00000357008 CAMKVQ8NCB2 501 aa14.36□□□□□ -0.11
CHD4-201ENST00000357008 PRMT3O60678 531 aa14.36□□□□□ -0.11
CHD4-201ENST00000357008 MAT2AP31153 395 aaKnown RBP14.36□□□□□ -0.11
CHD4-201ENST00000357008 TECRLQ5HYJ1 363 aa14.36□□□□□ -0.11
CHD4-201ENST00000357008 LRRTM4Q86VH4 590 aa14.36□□□□□ -0.11
CHD4-201ENST00000357008 MINDY1Q8N5J2 469 aa14.36□□□□□ -0.11
CHD4-201ENST00000357008 KREMEN2Q8NCW0 462 aa14.36□□□□□ -0.11
CHD4-201ENST00000357008 SLC5A11Q8WWX8 675 aa14.36□□□□□ -0.11
CHD4-201ENST00000357008 ERVK-18Q9QC07 812 aa14.36□□□□□ -0.11
CHD4-201ENST00000357008 EXTL2Q9UBQ6 330 aa14.36□□□□□ -0.11
CHD4-201ENST00000357008 STYXL1Q9Y6J8 313 aa14.36□□□□□ -0.11
CHD4-201ENST00000357008 TRAV6A0A075B6T7 132 aa14.36□□□□□ -0.11
CHD4-201ENST00000357008 A8MV72 311 aaPredicted RBP14.36□□□□□ -0.11
CHD4-201ENST00000357008 GNAO1P09471 354 aa14.36□□□□□ -0.11
CHD4-201ENST00000357008 MAP2K4P45985 399 aa14.36□□□□□ -0.11
CHD4-201ENST00000357008 E2F1Q01094 437 aa14.36□□□□□ -0.11
CHD4-201ENST00000357008 EFR3AQ14156 821 aa14.36□□□□□ -0.11
CHD4-201ENST00000357008 CDHR3Q6ZTQ4 885 aa14.36□□□□□ -0.11
CHD4-201ENST00000357008 CYS1Q717R9 158 aa14.36□□□□□ -0.11
CHD4-201ENST00000357008 RHEBL1Q8TAI7 183 aa14.36□□□□□ -0.11
CHD4-201ENST00000357008 SH3RF2Q8TEC5 729 aa14.36□□□□□ -0.11
CHD4-201ENST00000357008 DENND1AQ8TEH3 1009 aa14.36□□□□□ -0.11
CHD4-201ENST00000357008 ZNF350Q9GZX5 532 aa14.36□□□□□ -0.11
CHD4-201ENST00000357008 DISC1C4P0D8 188 aa14.36□□□□□ -0.11
CHD4-201ENST00000357008 SCAMP1O15126 338 aa14.36□□□□□ -0.11
CHD4-201ENST00000357008 PRAMEF11O60813 436 aa14.36□□□□□ -0.11
CHD4-201ENST00000357008 SLC6A6P31641 620 aa14.36□□□□□ -0.11
CHD4-201ENST00000357008 LEPRP48357 1165 aaKnown RBP14.36□□□□□ -0.11
CHD4-201ENST00000357008 FAM43BQ6ZT52 329 aaPredicted RBP14.36□□□□□ -0.11
CHD4-201ENST00000357008 EGFL6Q8IUX8 553 aa14.36□□□□□ -0.11
CHD4-201ENST00000357008 OR51B5Q9H339 312 aa14.36□□□□□ -0.11
CHD4-201ENST00000357008 RANBP3Q9H6Z4 567 aaPredicted RBP14.36□□□□□ -0.11
CHD4-201ENST00000357008 HTR1AP08908 422 aa14.36□□□□□ -0.11
CHD4-201ENST00000357008 MATN1P21941 496 aa14.36□□□□□ -0.11
CHD4-201ENST00000357008 ZNF267Q14586 743 aaPredicted RBP14.36□□□□□ -0.11
CHD4-201ENST00000357008 LRRC69Q6ZNQ3 347 aa14.36□□□□□ -0.11
CHD4-201ENST00000357008 PSD4Q8NDX1 1056 aa14.36□□□□□ -0.11
CHD4-201ENST00000357008 OR5J2Q8NH18 312 aa14.36□□□□□ -0.11
CHD4-201ENST00000357008 SMURF1Q9HCE7 757 aa14.36□□□□□ -0.11
CHD4-201ENST00000357008 POLE4Q9NR33 117 aa14.36□□□□□ -0.11
CHD4-201ENST00000357008 SERINC1Q9NRX5 453 aa14.36□□□□□ -0.11
CHD4-201ENST00000357008 RHCGQ9UBD6 479 aa14.36□□□□□ -0.11
CHD4-201ENST00000357008 SMIM30A4D0T7 59 aa14.35□□□□□ -0.11
CHD4-201ENST00000357008 GABARAPL2P60520 117 aa14.35□□□□□ -0.11
CHD4-201ENST00000357008 GRIK2Q13002 908 aa14.35□□□□□ -0.11
CHD4-201ENST00000357008 GINS1Q14691 196 aa14.35□□□□□ -0.11
CHD4-201ENST00000357008 PCBP2Q15366 365 aaKnown RBP eCLIP14.35□□□□□ -0.11
CHD4-201ENST00000357008 CHERPQ8IWX8 916 aaKnown RBP14.35□□□□□ -0.11
CHD4-201ENST00000357008 HDDC3Q8N4P3 179 aa14.35□□□□□ -0.11
CHD4-201ENST00000357008 HCN3Q9P1Z3 774 aa14.35□□□□□ -0.11
CHD4-201ENST00000357008 A0A0G2JLL6 359 aaPredicted RBP14.35□□□□□ -0.11
CHD4-201ENST00000357008 ZNF726A6NNF4 738 aa14.35□□□□□ -0.11
CHD4-201ENST00000357008 NRP1O14786 923 aa14.35□□□□□ -0.11
CHD4-201ENST00000357008 RP2O75695 350 aa14.35□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms