RNA–Protein interactions for RNA: ENST00000356147.3

PTPRA-203, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPRA, Length 3,135 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-203ENST00000356147 GTF3C2Q8WUA4 911 aaPredicted RBP9.76□□□□□ -0.85
PTPRA-203ENST00000356147 ASB15Q8WXK1 588 aa9.76□□□□□ -0.85
PTPRA-203ENST00000356147 FAM129BQ96TA1 746 aa9.76□□□□□ -0.85
PTPRA-203ENST00000356147 PARK7Q99497 189 aaKnown RBP9.76□□□□□ -0.85
PTPRA-203ENST00000356147 DUSP26Q9BV47 211 aa9.76□□□□□ -0.85
PTPRA-203ENST00000356147 GABARAPL3Q9BY60 117 aa9.76□□□□□ -0.85
PTPRA-203ENST00000356147 CCDC177Q9NQR7 707 aaPredicted RBP9.76□□□□□ -0.85
PTPRA-203ENST00000356147 GIMAP4Q9NUV9 329 aa9.76□□□□□ -0.85
PTPRA-203ENST00000356147 GNG14A0A1W2PPG7 69 aa9.75□□□□□ -0.85
PTPRA-203ENST00000356147 FAM172BPA6NC97 362 aa9.75□□□□□ -0.85
PTPRA-203ENST00000356147 SLC38A8A6NNN8 435 aa9.75□□□□□ -0.85
PTPRA-203ENST00000356147 STC2O76061 302 aa9.75□□□□□ -0.85
PTPRA-203ENST00000356147 IFI30P13284 250 aa9.75□□□□□ -0.85
PTPRA-203ENST00000356147 GALK2Q01415 458 aa9.75□□□□□ -0.85
PTPRA-203ENST00000356147 MC1RQ01726 317 aa9.75□□□□□ -0.85
PTPRA-203ENST00000356147 RING1Q06587 406 aa9.75□□□□□ -0.85
PTPRA-203ENST00000356147 CSTF3Q12996 717 aaKnown RBP9.75□□□□□ -0.85
PTPRA-203ENST00000356147 STARD3Q14849 445 aa9.75□□□□□ -0.85
PTPRA-203ENST00000356147 CDK10Q15131 360 aa9.75□□□□□ -0.85
PTPRA-203ENST00000356147 ZNF79Q15937 498 aa9.75□□□□□ -0.85
PTPRA-203ENST00000356147 ATP13A5Q4VNC0 1218 aa9.75□□□□□ -0.85
PTPRA-203ENST00000356147 XKR6Q5GH73 641 aa9.75□□□□□ -0.85
PTPRA-203ENST00000356147 MORN1Q5T089 497 aa9.75□□□□□ -0.85
PTPRA-203ENST00000356147 CERS6Q6ZMG9 384 aa9.75□□□□□ -0.85
PTPRA-203ENST00000356147 ATCAYQ86WG3 371 aa9.75□□□□□ -0.85
PTPRA-203ENST00000356147 GPR65Q8IYL9 337 aa9.75□□□□□ -0.85
PTPRA-203ENST00000356147 AQP11Q8NBQ7 271 aa9.75□□□□□ -0.85
PTPRA-203ENST00000356147 CMTM7Q96FZ5 175 aa9.75□□□□□ -0.85
PTPRA-203ENST00000356147 SAMD11Q96NU1 681 aa9.75□□□□□ -0.85
PTPRA-203ENST00000356147 VPS35Q96QK1 796 aa9.75□□□□□ -0.85
PTPRA-203ENST00000356147 DOHHQ9BU89 302 aa9.75□□□□□ -0.85
PTPRA-203ENST00000356147 LINC00597Q9H2U6 94 aa9.75□□□□□ -0.85
PTPRA-203ENST00000356147 ANKHQ9HCJ1 492 aa9.75□□□□□ -0.85
PTPRA-203ENST00000356147 TMEM39AQ9NV64 488 aa9.75□□□□□ -0.85
PTPRA-203ENST00000356147 MKLN1Q9UL63 735 aa9.75□□□□□ -0.85
PTPRA-203ENST00000356147 AP3M1Q9Y2T2 418 aa9.75□□□□□ -0.85
PTPRA-203ENST00000356147 YARS2Q9Y2Z4 477 aaKnown RBP9.75□□□□□ -0.85
PTPRA-203ENST00000356147 PCM1Q15154 2024 aa9.75□□□□□ -0.85
PTPRA-203ENST00000356147 MEN1O00255 615 aa9.75□□□□□ -0.85
PTPRA-203ENST00000356147 SLITRK5O94991 958 aa9.75□□□□□ -0.85
PTPRA-203ENST00000356147 HIST1H2AGP0C0S8 130 aaPredicted RBP9.75□□□□□ -0.85
PTPRA-203ENST00000356147 IL7P13232 177 aa9.75□□□□□ -0.85
PTPRA-203ENST00000356147 HIST1H2ADP20671 130 aa9.75□□□□□ -0.85
PTPRA-203ENST00000356147 PRPS1L1P21108 318 aa9.75□□□□□ -0.85
PTPRA-203ENST00000356147 CD9P21926 228 aa9.75□□□□□ -0.85
PTPRA-203ENST00000356147 ACSM2AQ08AH3 577 aa9.75□□□□□ -0.85
PTPRA-203ENST00000356147 RGNQ15493 299 aa9.75□□□□□ -0.85
PTPRA-203ENST00000356147 CCSMST1Q4G0I0 132 aa9.75□□□□□ -0.85
PTPRA-203ENST00000356147 ACSM2BQ68CK6 577 aa9.75□□□□□ -0.85
PTPRA-203ENST00000356147 TMIGD1Q6UXZ0 262 aa9.75□□□□□ -0.85
PTPRA-203ENST00000356147 TMPRSS11AQ6ZMR5 421 aa9.75□□□□□ -0.85
PTPRA-203ENST00000356147 ZNF438Q7Z4V0 828 aa9.75□□□□□ -0.85
PTPRA-203ENST00000356147 HS6ST3Q8IZP7 471 aa9.75□□□□□ -0.85
PTPRA-203ENST00000356147 SYNPOQ8N3V7 929 aa9.75□□□□□ -0.85
PTPRA-203ENST00000356147 OR4A15Q8NGL6 344 aa9.75□□□□□ -0.85
PTPRA-203ENST00000356147 HIST1H2AHQ96KK5 128 aa9.75□□□□□ -0.85
PTPRA-203ENST00000356147 PKP4Q99569 1192 aa9.75□□□□□ -0.85
PTPRA-203ENST00000356147 HIST1H2AJQ99878 128 aa9.75□□□□□ -0.85
PTPRA-203ENST00000356147 H2AFJQ9BTM1 129 aa9.75□□□□□ -0.85
PTPRA-203ENST00000356147 IRF2BPLQ9H1B7 796 aa9.75□□□□□ -0.85
PTPRA-203ENST00000356147 GPATCH2Q9NW75 528 aa9.75□□□□□ -0.85
PTPRA-203ENST00000356147 CCDC59Q9P031 241 aaKnown RBP9.75□□□□□ -0.85
PTPRA-203ENST00000356147 PCDHB11Q9Y5F2 797 aa9.75□□□□□ -0.85
PTPRA-203ENST00000356147 KCNE1BA0A087WTH5 132 aa9.74□□□□□ -0.85
PTPRA-203ENST00000356147 PRAMEF33A0A0G2JMD5 474 aa9.74□□□□□ -0.85
PTPRA-203ENST00000356147 A0A1B0GVM2 712 aa9.74□□□□□ -0.85
PTPRA-203ENST00000356147 NPIPB15A6NHN6 443 aaPredicted RBP9.74□□□□□ -0.85
PTPRA-203ENST00000356147 E7EQ34 232 aa9.74□□□□□ -0.85
PTPRA-203ENST00000356147 PLD2O14939 933 aa9.74□□□□□ -0.85
PTPRA-203ENST00000356147 PRAMEF10O60809 474 aa9.74□□□□□ -0.85
PTPRA-203ENST00000356147 ENTPD6O75354 484 aa9.74□□□□□ -0.85
PTPRA-203ENST00000356147 SRCP12931 536 aa9.74□□□□□ -0.85
PTPRA-203ENST00000356147 B4GALNT1Q00973 533 aa9.74□□□□□ -0.85
PTPRA-203ENST00000356147 LRRC74AQ0VAA2 488 aa9.74□□□□□ -0.85
PTPRA-203ENST00000356147 ABRQ12979 859 aa9.74□□□□□ -0.85
PTPRA-203ENST00000356147 LIPKQ5VXJ0 399 aa9.74□□□□□ -0.85
PTPRA-203ENST00000356147 C9orf131Q5VYM1 1079 aa9.74□□□□□ -0.85
PTPRA-203ENST00000356147 FAM131AQ6UXB0 335 aa9.74□□□□□ -0.85
PTPRA-203ENST00000356147 HMGN2P46Q86SG4 172 aa9.74□□□□□ -0.85
PTPRA-203ENST00000356147 MEX3DQ86XN8 651 aaKnown RBP9.74□□□□□ -0.85
PTPRA-203ENST00000356147 NXPE1Q8N323 547 aa9.74□□□□□ -0.85
PTPRA-203ENST00000356147 CIDECQ96AQ7 238 aaPredicted RBP9.74□□□□□ -0.85
PTPRA-203ENST00000356147 EPYCQ99645 322 aa9.74□□□□□ -0.85
PTPRA-203ENST00000356147 SLC29A3Q9BZD2 475 aa9.74□□□□□ -0.85
PTPRA-203ENST00000356147 ASIC5Q9NY37 505 aa9.74□□□□□ -0.85
PTPRA-203ENST00000356147 RAB23Q9ULC3 237 aa9.74□□□□□ -0.85
PTPRA-203ENST00000356147 TRAV19A0A0A6YYK7 116 aa9.74□□□□□ -0.85
PTPRA-203ENST00000356147 CAPN5O15484 640 aaPredicted RBP9.74□□□□□ -0.85
PTPRA-203ENST00000356147 FZD6O60353 706 aa9.74□□□□□ -0.85
PTPRA-203ENST00000356147 GASTP01350 101 aa9.74□□□□□ -0.85
PTPRA-203ENST00000356147 ANXA4P09525 319 aaPredicted RBP9.74□□□□□ -0.85
PTPRA-203ENST00000356147 GABRB1P18505 474 aa9.74□□□□□ -0.85
PTPRA-203ENST00000356147 PAX3P23760 479 aa9.74□□□□□ -0.85
PTPRA-203ENST00000356147 RAB25P57735 213 aa9.74□□□□□ -0.85
PTPRA-203ENST00000356147 RPS26P62854 115 aaKnown RBP9.74□□□□□ -0.85
PTPRA-203ENST00000356147 GPLD1P80108 840 aa9.74□□□□□ -0.85
PTPRA-203ENST00000356147 UBE3AQ05086 875 aa9.74□□□□□ -0.85
PTPRA-203ENST00000356147 ZNF385BQ569K4 471 aa9.74□□□□□ -0.85
PTPRA-203ENST00000356147 CPTPQ5TA50 214 aa9.74□□□□□ -0.85
PTPRA-203ENST00000356147 RFPL4BQ6ZWI9 263 aa9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms