RNA–Protein interactions for RNA: ENST00000355354.11

CD47-201, Transcript of CD47 molecule, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CD47, Length 5,020 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-201ENST00000355354 BHLHE23Q8NDY6 225 aa5.37□□□□□ -1.55
CD47-201ENST00000355354 TMEM52Q8NDY8 209 aa5.37□□□□□ -1.55
CD47-201ENST00000355354 FGF11Q92914 225 aa5.37□□□□□ -1.55
CD47-201ENST00000355354 YIPF4Q9BSR8 244 aa5.37□□□□□ -1.55
CD47-201ENST00000355354 TXLNGQ9NUQ3 528 aa5.37□□□□□ -1.55
CD47-201ENST00000355354 ING1Q9UK53 422 aaPredicted RBP5.37□□□□□ -1.55
CD47-201ENST00000355354 RAP2CQ9Y3L5 183 aa5.37□□□□□ -1.55
CD47-201ENST00000355354 CPQQ9Y646 472 aa5.37□□□□□ -1.55
CD47-201ENST00000355354 SPECC1L-ADORA2AF8WAN1 911 aa5.37□□□□□ -1.55
CD47-201ENST00000355354 CDC42EP2O14613 210 aa5.37□□□□□ -1.55
CD47-201ENST00000355354 CDX4O14627 284 aaPredicted RBP5.37□□□□□ -1.55
CD47-201ENST00000355354 PLOD3O60568 738 aa5.37□□□□□ -1.55
CD47-201ENST00000355354 IGLV3-19P01714 112 aa5.37□□□□□ -1.55
CD47-201ENST00000355354 BCKDHAP12694 445 aa5.37□□□□□ -1.55
CD47-201ENST00000355354 GFAPP14136 432 aa5.37□□□□□ -1.55
CD47-201ENST00000355354 SNRPBP14678 240 aaKnown RBP5.37□□□□□ -1.55
CD47-201ENST00000355354 TBXAS1P24557 533 aaPredicted RBP5.37□□□□□ -1.55
CD47-201ENST00000355354 PPARGP37231 505 aaPredicted RBP5.37□□□□□ -1.55
CD47-201ENST00000355354 HSPA14Q0VDF9 509 aa5.37□□□□□ -1.55
CD47-201ENST00000355354 CYLC2Q14093 348 aaPredicted RBP5.37□□□□□ -1.55
CD47-201ENST00000355354 DOC2AQ14183 400 aa5.37□□□□□ -1.55
CD47-201ENST00000355354 FGL2Q14314 439 aa5.37□□□□□ -1.55
CD47-201ENST00000355354 IGFBP7Q16270 282 aa5.37□□□□□ -1.55
CD47-201ENST00000355354 Q6ZVU0 165 aa5.37□□□□□ -1.55
CD47-201ENST00000355354 LEMD2Q8NC56 503 aa5.37□□□□□ -1.55
CD47-201ENST00000355354 OR4M2Q8NGB6 313 aa5.37□□□□□ -1.55
CD47-201ENST00000355354 PUM2Q8TB72 1066 aaKnown RBP eCLIP5.37□□□□□ -1.55
CD47-201ENST00000355354 FGF13Q92913 245 aa5.37□□□□□ -1.55
CD47-201ENST00000355354 DGCR14Q96DF8 476 aaKnown RBP5.37□□□□□ -1.55
CD47-201ENST00000355354 ASB9Q96DX5 294 aa5.37□□□□□ -1.55
CD47-201ENST00000355354 RDH12Q96NR8 316 aa5.37□□□□□ -1.55
CD47-201ENST00000355354 FEVQ99581 238 aa5.37□□□□□ -1.55
CD47-201ENST00000355354 BEX1Q9HBH7 125 aa5.37□□□□□ -1.55
CD47-201ENST00000355354 KCNE5Q9UJ90 142 aa5.37□□□□□ -1.55
CD47-201ENST00000355354 CDH7Q9ULB5 785 aa5.37□□□□□ -1.55
CD47-201ENST00000355354 APOBEC2Q9Y235 224 aaKnown RBP5.37□□□□□ -1.55
CD47-201ENST00000355354 MTMR11A4FU01 709 aa5.37□□□□□ -1.55
CD47-201ENST00000355354 MAGEB17A8MXT2 336 aa5.37□□□□□ -1.55
CD47-201ENST00000355354 PSMD9O00233 223 aa5.37□□□□□ -1.55
CD47-201ENST00000355354 FZD6O60353 706 aa5.37□□□□□ -1.55
CD47-201ENST00000355354 EEDO75530 441 aaKnown RBP5.37□□□□□ -1.55
CD47-201ENST00000355354 DCTN3O75935 186 aa5.37□□□□□ -1.55
CD47-201ENST00000355354 EPN2O95208 641 aa5.37□□□□□ -1.55
CD47-201ENST00000355354 KCNK5O95279 499 aa5.37□□□□□ -1.55
CD47-201ENST00000355354 ZDHHC11BP0C7U3 371 aa5.37□□□□□ -1.55
CD47-201ENST00000355354 PABPC1P11940 636 aaKnown RBP5.37□□□□□ -1.55
CD47-201ENST00000355354 GABRB1P18505 474 aa5.37□□□□□ -1.55
CD47-201ENST00000355354 OR1E1P30953 314 aa5.37□□□□□ -1.55
CD47-201ENST00000355354 VIPR2P41587 438 aa5.37□□□□□ -1.55
CD47-201ENST00000355354 CBLBQ13191 982 aa5.37□□□□□ -1.55
CD47-201ENST00000355354 IFI16Q16666 785 aaKnown RBP5.37□□□□□ -1.55
CD47-201ENST00000355354 FIGNL1Q6PIW4 674 aa5.37□□□□□ -1.55
CD47-201ENST00000355354 UNC5DQ6UXZ4 953 aa5.37□□□□□ -1.55
CD47-201ENST00000355354 C16orf47Q6ZP98 133 aaPredicted RBP5.37□□□□□ -1.55
CD47-201ENST00000355354 KIAA0907Q7Z7F0 614 aaPredicted RBP5.37□□□□□ -1.55
CD47-201ENST00000355354 TRAF3IP1Q8TDR0 691 aaPredicted RBP5.37□□□□□ -1.55
CD47-201ENST00000355354 RPRD1AQ96P16 312 aaPredicted RBP5.37□□□□□ -1.55
CD47-201ENST00000355354 KCNC2Q96PR1 638 aa5.37□□□□□ -1.55
CD47-201ENST00000355354 DOK1Q99704 481 aa5.37□□□□□ -1.55
CD47-201ENST00000355354 LRRC27Q9C0I9 530 aa5.37□□□□□ -1.55
CD47-201ENST00000355354 MRPL46Q9H2W6 279 aaKnown RBP5.37□□□□□ -1.55
CD47-201ENST00000355354 TDP1Q9NUW8 608 aa5.37□□□□□ -1.55
CD47-201ENST00000355354 MKS1Q9NXB0 559 aa5.37□□□□□ -1.55
CD47-201ENST00000355354 KLHL3Q9UH77 587 aa5.37□□□□□ -1.55
CD47-201ENST00000355354 ZNF639Q9UID6 485 aa5.37□□□□□ -1.55
CD47-201ENST00000355354 WDR37Q9Y2I8 494 aa5.37□□□□□ -1.55
CD47-201ENST00000355354 C5orf63A6NC05 138 aa5.37□□□□□ -1.55
CD47-201ENST00000355354 PABPN1LA6NDY0 278 aaKnown RBP5.37□□□□□ -1.55
CD47-201ENST00000355354 ACOD1A6NK06 481 aa5.37□□□□□ -1.55
CD47-201ENST00000355354 OR1G1P47890 313 aa5.37□□□□□ -1.55
CD47-201ENST00000355354 SCAPQ12770 1279 aa5.37□□□□□ -1.55
CD47-201ENST00000355354 TUSC3Q13454 348 aa5.37□□□□□ -1.55
CD47-201ENST00000355354 CHRNA6Q15825 494 aa5.37□□□□□ -1.55
CD47-201ENST00000355354 DBN1Q16643 649 aa5.37□□□□□ -1.55
CD47-201ENST00000355354 SNAP47Q5SQN1 464 aa5.37□□□□□ -1.55
CD47-201ENST00000355354 ACSM5Q6NUN0 579 aa5.37□□□□□ -1.55
CD47-201ENST00000355354 PPP4R4Q6NUP7 873 aa5.37□□□□□ -1.55
CD47-201ENST00000355354 ATRAIDQ6UW56 229 aa5.37□□□□□ -1.55
CD47-201ENST00000355354 DPY19L3Q6ZPD9 716 aa5.37□□□□□ -1.55
CD47-201ENST00000355354 GLRX5Q86SX6 157 aa5.37□□□□□ -1.55
CD47-201ENST00000355354 LAX1Q8IWV1 398 aa5.37□□□□□ -1.55
CD47-201ENST00000355354 PGAM4Q8N0Y7 254 aa5.37□□□□□ -1.55
CD47-201ENST00000355354 APOBEC4Q8WW27 367 aaKnown RBP5.37□□□□□ -1.55
CD47-201ENST00000355354 SH3YL1Q96HL8 342 aaPredicted RBP5.37□□□□□ -1.55
CD47-201ENST00000355354 TSPAN18Q96SJ8 248 aa5.37□□□□□ -1.55
CD47-201ENST00000355354 CORO1BQ9BR76 489 aa5.37□□□□□ -1.55
CD47-201ENST00000355354 SLC46A2Q9BY10 475 aa5.37□□□□□ -1.55
CD47-201ENST00000355354 OR51B5Q9H339 312 aa5.37□□□□□ -1.55
CD47-201ENST00000355354 FSCN3Q9NQT6 498 aa5.37□□□□□ -1.55
CD47-201ENST00000355354 GDE1Q9NZC3 331 aa5.37□□□□□ -1.55
CD47-201ENST00000355354 ZNF581Q9P0T4 197 aa5.37□□□□□ -1.55
CD47-201ENST00000355354 ITGA11Q9UKX5 1188 aa5.37□□□□□ -1.55
CD47-201ENST00000355354 SLC5A6Q9Y289 635 aa5.37□□□□□ -1.55
CD47-201ENST00000355354 HEPACAM2A8MVW5 462 aa5.36□□□□□ -1.55
CD47-201ENST00000355354 E9PQ18 207 aa5.36□□□□□ -1.55
CD47-201ENST00000355354 AP3B1O00203 1094 aa5.36□□□□□ -1.55
CD47-201ENST00000355354 AQP9O43315 295 aa5.36□□□□□ -1.55
CD47-201ENST00000355354 MPIP34949 423 aa5.36□□□□□ -1.55
CD47-201ENST00000355354 STC1P52823 247 aa5.36□□□□□ -1.55
CD47-201ENST00000355354 PLXDC2Q6UX71 529 aa5.36□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms