RNA–Protein interactions for RNA: ENST00000355155.5

VPS13B-201, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 1 (best) BASIC

Gene VPS13B, Length 2,822 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-201ENST00000355155 MLC1Q15049 377 aa16.46■□□□□ 0.23
VPS13B-201ENST00000355155 HKDC1Q2TB90 917 aa16.46■□□□□ 0.23
VPS13B-201ENST00000355155 MFSD2AQ8NA29 543 aa16.46■□□□□ 0.23
VPS13B-201ENST00000355155 RGMAQ96B86 450 aa16.46■□□□□ 0.23
VPS13B-201ENST00000355155 MIEF2Q96C03 454 aa16.46■□□□□ 0.23
VPS13B-201ENST00000355155 PRAP1Q96NZ9 151 aa16.46■□□□□ 0.23
VPS13B-201ENST00000355155 COPS7BQ9H9Q2 264 aaPredicted RBP16.46■□□□□ 0.23
VPS13B-201ENST00000355155 A0A0A6YYD5 115 aa16.46■□□□□ 0.22
VPS13B-201ENST00000355155 FOSL2P15408 326 aa16.46■□□□□ 0.22
VPS13B-201ENST00000355155 IL10P22301 178 aa16.46■□□□□ 0.22
VPS13B-201ENST00000355155 CD27P26842 260 aa16.46■□□□□ 0.22
VPS13B-201ENST00000355155 AK4P27144 223 aaPredicted RBP16.46■□□□□ 0.22
VPS13B-201ENST00000355155 RBBP5Q15291 538 aaKnown RBP16.46■□□□□ 0.22
VPS13B-201ENST00000355155 GTDC1Q4AE62 458 aa16.46■□□□□ 0.22
VPS13B-201ENST00000355155 INTS11Q5TA45 600 aaKnown RBP16.46■□□□□ 0.22
VPS13B-201ENST00000355155 CYP2R1Q6VVX0 501 aa16.46■□□□□ 0.22
VPS13B-201ENST00000355155 UBALD2Q8IYN6 164 aa16.46■□□□□ 0.22
VPS13B-201ENST00000355155 TBC1D19Q8N5T2 526 aa16.46■□□□□ 0.22
VPS13B-201ENST00000355155 AICDAQ9GZX7 198 aa16.46■□□□□ 0.22
VPS13B-201ENST00000355155 UCK1Q9HA47 277 aa16.46■□□□□ 0.22
VPS13B-201ENST00000355155 EGFL7Q9UHF1 273 aa16.46■□□□□ 0.22
VPS13B-201ENST00000355155 ZNF639Q9UID6 485 aa16.46■□□□□ 0.22
VPS13B-201ENST00000355155 MOSPD1Q9UJG1 213 aa16.46■□□□□ 0.22
VPS13B-201ENST00000355155 ENTPD2Q9Y5L3 495 aa16.46■□□□□ 0.22
VPS13B-201ENST00000355155 BRWD1Q9NSI6 2320 aa16.45■□□□□ 0.22
VPS13B-201ENST00000355155 LCMT2O60294 686 aaKnown RBP16.45■□□□□ 0.22
VPS13B-201ENST00000355155 KLC1Q07866 573 aa16.45■□□□□ 0.22
VPS13B-201ENST00000355155 ILF3Q12906 894 aaKnown RBP eCLIP16.45■□□□□ 0.22
VPS13B-201ENST00000355155 KRT33BQ14525 404 aa16.45■□□□□ 0.22
VPS13B-201ENST00000355155 TRIP10Q15642 601 aa16.45■□□□□ 0.22
VPS13B-201ENST00000355155 SLC5A12Q1EHB4 618 aa16.45■□□□□ 0.22
VPS13B-201ENST00000355155 ZNF385BQ569K4 471 aa16.45■□□□□ 0.22
VPS13B-201ENST00000355155 SFT2D3Q587I9 215 aa16.45■□□□□ 0.22
VPS13B-201ENST00000355155 IZUMO2Q6UXV1 221 aa16.45■□□□□ 0.22
VPS13B-201ENST00000355155 ZFP90Q8TF47 636 aa16.45■□□□□ 0.22
VPS13B-201ENST00000355155 TM4SF18Q96CE8 201 aa16.45■□□□□ 0.22
VPS13B-201ENST00000355155 NSMCE2Q96MF7 247 aa16.45■□□□□ 0.22
VPS13B-201ENST00000355155 TRIM4Q9C037 500 aa16.45■□□□□ 0.22
VPS13B-201ENST00000355155 ANAPC2Q9UJX6 822 aa16.45■□□□□ 0.22
VPS13B-201ENST00000355155 OR2A25A4D2G3 310 aa16.45■□□□□ 0.22
VPS13B-201ENST00000355155 LRIT2A6NDA9 550 aa16.45■□□□□ 0.22
VPS13B-201ENST00000355155 NDUFS4O43181 175 aa16.45■□□□□ 0.22
VPS13B-201ENST00000355155 LRATO95237 230 aa16.45■□□□□ 0.22
VPS13B-201ENST00000355155 ZNF26P17031 533 aaPredicted RBP16.45■□□□□ 0.22
VPS13B-201ENST00000355155 DDCP20711 480 aa16.45■□□□□ 0.22
VPS13B-201ENST00000355155 ACTR1BP42025 376 aa16.45■□□□□ 0.22
VPS13B-201ENST00000355155 HSPA13P48723 471 aa16.45■□□□□ 0.22
VPS13B-201ENST00000355155 BLKP51451 505 aa16.45■□□□□ 0.22
VPS13B-201ENST00000355155 ACTR1AP61163 376 aa16.45■□□□□ 0.22
VPS13B-201ENST00000355155 MPEG1Q2M385 716 aa16.45■□□□□ 0.22
VPS13B-201ENST00000355155 LPCAT4Q643R3 524 aa16.45■□□□□ 0.22
VPS13B-201ENST00000355155 MRM1Q6IN84 353 aaKnown RBP16.45■□□□□ 0.22
VPS13B-201ENST00000355155 ZNF551Q7Z340 670 aaPredicted RBP16.45■□□□□ 0.22
VPS13B-201ENST00000355155 ZCCHC7Q8N3Z6 543 aaKnown RBP16.45■□□□□ 0.22
VPS13B-201ENST00000355155 CCL4L1Q8NHW4 92 aa16.45■□□□□ 0.22
VPS13B-201ENST00000355155 GPR174Q9BXC1 333 aa16.45■□□□□ 0.22
VPS13B-201ENST00000355155 TRIM8Q9BZR9 551 aa16.45■□□□□ 0.22
VPS13B-201ENST00000355155 XKR8Q9H6D3 395 aa16.45■□□□□ 0.22
VPS13B-201ENST00000355155 PRDM9Q9NQV7 894 aa16.45■□□□□ 0.22
VPS13B-201ENST00000355155 SPHK1Q9NYA1 384 aa16.45■□□□□ 0.22
VPS13B-201ENST00000355155 INVSQ9Y283 1065 aa16.45■□□□□ 0.22
VPS13B-201ENST00000355155 PCDHGA4Q9Y5G9 962 aa16.45■□□□□ 0.22
VPS13B-201ENST00000355155 SPTBN5Q9NRC6 3674 aaKnown RBP16.44■□□□□ 0.22
VPS13B-201ENST00000355155 F5P12259 2224 aa16.44■□□□□ 0.22
VPS13B-201ENST00000355155 VILLO15195 856 aa16.44■□□□□ 0.22
VPS13B-201ENST00000355155 DENRO43583 198 aaKnown RBP16.44■□□□□ 0.22
VPS13B-201ENST00000355155 BCL6P41182 706 aa16.44■□□□□ 0.22
VPS13B-201ENST00000355155 VEZF1Q14119 521 aa16.44■□□□□ 0.22
VPS13B-201ENST00000355155 SKIV2LQ15477 1246 aaKnown RBP16.44■□□□□ 0.22
VPS13B-201ENST00000355155 ATP6AP1Q15904 470 aa16.44■□□□□ 0.22
VPS13B-201ENST00000355155 TMEM31Q5JXX7 168 aa16.44■□□□□ 0.22
VPS13B-201ENST00000355155 ANO7Q6IWH7 933 aa16.44■□□□□ 0.22
VPS13B-201ENST00000355155 NUDT13Q86X67 352 aa16.44■□□□□ 0.22
VPS13B-201ENST00000355155 EID3Q8N140 333 aa16.44■□□□□ 0.22
VPS13B-201ENST00000355155 SDR16C5Q8N3Y7 309 aa16.44■□□□□ 0.22
VPS13B-201ENST00000355155 FAM47BQ8NA70 645 aa16.44■□□□□ 0.22
VPS13B-201ENST00000355155 GPR156Q8NFN8 814 aa16.44■□□□□ 0.22
VPS13B-201ENST00000355155 OR10A6Q8NH74 314 aa16.44■□□□□ 0.22
VPS13B-201ENST00000355155 PSMA8Q8TAA3 256 aa16.44■□□□□ 0.22
VPS13B-201ENST00000355155 TM4SF19Q96DZ7 209 aa16.44■□□□□ 0.22
VPS13B-201ENST00000355155 NR1H4Q96RI1 486 aaPredicted RBP16.44■□□□□ 0.22
VPS13B-201ENST00000355155 EHD3Q9NZN3 535 aa16.44■□□□□ 0.22
VPS13B-201ENST00000355155 RAB26Q9ULW5 256 aa16.44■□□□□ 0.22
VPS13B-201ENST00000355155 DTNAQ9Y4J8 743 aa16.44■□□□□ 0.22
VPS13B-201ENST00000355155 ERFP50548 548 aa16.44■□□□□ 0.22
VPS13B-201ENST00000355155 TSTA3Q13630 321 aaPredicted RBP16.44■□□□□ 0.22
VPS13B-201ENST00000355155 SF1Q15637 639 aaKnown RBP16.44■□□□□ 0.22
VPS13B-201ENST00000355155 IRGCQ6NXR0 463 aa16.44■□□□□ 0.22
VPS13B-201ENST00000355155 FBXL6Q8N531 539 aa16.44■□□□□ 0.22
VPS13B-201ENST00000355155 C2orf73Q8N5S3 287 aaPredicted RBP16.44■□□□□ 0.22
VPS13B-201ENST00000355155 AVL9Q8NBF6 648 aa16.44■□□□□ 0.22
VPS13B-201ENST00000355155 TBC1D20Q96BZ9 403 aa16.44■□□□□ 0.22
VPS13B-201ENST00000355155 ACAT2Q9BWD1 397 aa16.44■□□□□ 0.22
VPS13B-201ENST00000355155 SLC6A16Q9GZN6 736 aa16.44■□□□□ 0.22
VPS13B-201ENST00000355155 USP22Q9UPT9 525 aa16.44■□□□□ 0.22
VPS13B-201ENST00000355155 GNG14A0A1W2PPG7 69 aa16.43■□□□□ 0.22
VPS13B-201ENST00000355155 FAM170BA6NMN3 283 aa16.43■□□□□ 0.22
VPS13B-201ENST00000355155 AKAP10O43572 662 aa16.43■□□□□ 0.22
VPS13B-201ENST00000355155 EPN2O95208 641 aa16.43■□□□□ 0.22
VPS13B-201ENST00000355155 KLK1P06870 262 aa16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms