RNA–Protein interactions for RNA: ENST00000354674.4

SYNE1-203, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5 BASIC

Gene SYNE1, Length 3,154 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-203ENST00000354674 MAFAQ8NHW3 353 aaPredicted RBP9.74□□□□□ -0.85
SYNE1-203ENST00000354674 RPLP0P6Q8NHW5 317 aa9.74□□□□□ -0.85
SYNE1-203ENST00000354674 CHAC2Q8WUX2 184 aa9.74□□□□□ -0.85
SYNE1-203ENST00000354674 DEDD2Q8WXF8 326 aa9.74□□□□□ -0.85
SYNE1-203ENST00000354674 SCAMP4Q969E2 229 aa9.74□□□□□ -0.85
SYNE1-203ENST00000354674 ZHX1-C8orf76Q96EF9 292 aa9.74□□□□□ -0.85
SYNE1-203ENST00000354674 WRAP53Q9BUR4 548 aaKnown RBP9.74□□□□□ -0.85
SYNE1-203ENST00000354674 CYP4F12Q9HCS2 524 aa9.74□□□□□ -0.85
SYNE1-203ENST00000354674 FAM8A1Q9UBU6 413 aa9.74□□□□□ -0.85
SYNE1-203ENST00000354674 WNT16Q9UBV4 365 aa9.74□□□□□ -0.85
SYNE1-203ENST00000354674 CDYLQ9Y232 598 aa9.74□□□□□ -0.85
SYNE1-203ENST00000354674 U3KQV3 271 aa9.74□□□□□ -0.85
SYNE1-203ENST00000354674 UBA6A0AVT1 1052 aaPredicted RBP9.74□□□□□ -0.85
SYNE1-203ENST00000354674 FADS2P1A8MWK0 482 aa9.74□□□□□ -0.85
SYNE1-203ENST00000354674 LEUTXA8MZ59 168 aa9.74□□□□□ -0.85
SYNE1-203ENST00000354674 CHURC1-FNTBB4DL54 471 aa9.74□□□□□ -0.85
SYNE1-203ENST00000354674 MRASO14807 208 aa9.74□□□□□ -0.85
SYNE1-203ENST00000354674 ACOX3O15254 700 aa9.74□□□□□ -0.85
SYNE1-203ENST00000354674 PLRG1O43660 514 aaKnown RBP9.74□□□□□ -0.85
SYNE1-203ENST00000354674 PDGFAP04085 211 aa9.74□□□□□ -0.85
SYNE1-203ENST00000354674 CYP2A7P20853 494 aa9.74□□□□□ -0.85
SYNE1-203ENST00000354674 PKLRP30613 574 aa9.74□□□□□ -0.85
SYNE1-203ENST00000354674 NSG1P42857 185 aa9.74□□□□□ -0.85
SYNE1-203ENST00000354674 SERPINB10P48595 397 aa9.74□□□□□ -0.85
SYNE1-203ENST00000354674 CLCN7P51798 805 aa9.74□□□□□ -0.85
SYNE1-203ENST00000354674 STARD6P59095 220 aa9.74□□□□□ -0.85
SYNE1-203ENST00000354674 FZD5Q13467 585 aa9.74□□□□□ -0.85
SYNE1-203ENST00000354674 TOP3AQ13472 1001 aaPredicted RBP9.74□□□□□ -0.85
SYNE1-203ENST00000354674 ACOX1Q15067 660 aa9.74□□□□□ -0.85
SYNE1-203ENST00000354674 POU4F3Q15319 338 aa9.74□□□□□ -0.85
SYNE1-203ENST00000354674 PIM3Q86V86 326 aa9.74□□□□□ -0.85
SYNE1-203ENST00000354674 TIGD4Q8IY51 512 aa9.74□□□□□ -0.85
SYNE1-203ENST00000354674 LSMEM2Q8N112 164 aa9.74□□□□□ -0.85
SYNE1-203ENST00000354674 AFAP1L2Q8N4X5 818 aa9.74□□□□□ -0.85
SYNE1-203ENST00000354674 PDPRQ8NCN5 879 aa9.74□□□□□ -0.85
SYNE1-203ENST00000354674 DNAJB14Q8TBM8 379 aa9.74□□□□□ -0.85
SYNE1-203ENST00000354674 ANKRD49Q8WVL7 239 aa9.74□□□□□ -0.85
SYNE1-203ENST00000354674 TRAF4Q9BUZ4 470 aaPredicted RBP9.74□□□□□ -0.85
SYNE1-203ENST00000354674 RIOK2Q9BVS4 552 aaKnown RBP9.74□□□□□ -0.85
SYNE1-203ENST00000354674 NMRAL1Q9HBL8 299 aa9.74□□□□□ -0.85
SYNE1-203ENST00000354674 ZBTB26Q9HCK0 441 aa9.74□□□□□ -0.85
SYNE1-203ENST00000354674 TAS2R13Q9NYV9 303 aa9.74□□□□□ -0.85
SYNE1-203ENST00000354674 PRSS21Q9Y6M0 314 aa9.74□□□□□ -0.85
SYNE1-203ENST00000354674 C10orf142B7Z368 130 aa9.73□□□□□ -0.85
SYNE1-203ENST00000354674 H3BMM5 538 aa9.73□□□□□ -0.85
SYNE1-203ENST00000354674 PLD2O14939 933 aa9.73□□□□□ -0.85
SYNE1-203ENST00000354674 MMP20O60882 483 aa9.73□□□□□ -0.85
SYNE1-203ENST00000354674 RECQL5O94762 991 aaPredicted RBP9.73□□□□□ -0.85
SYNE1-203ENST00000354674 APOA4P06727 396 aa9.73□□□□□ -0.85
SYNE1-203ENST00000354674 ZNF37AP17032 561 aaPredicted RBP9.73□□□□□ -0.85
SYNE1-203ENST00000354674 RAB25P57735 213 aa9.73□□□□□ -0.85
SYNE1-203ENST00000354674 LAPTM4AQ15012 233 aa9.73□□□□□ -0.85
SYNE1-203ENST00000354674 SPDYE7PQ495Y7 208 aa9.73□□□□□ -0.85
SYNE1-203ENST00000354674 REP15Q6BDI9 236 aa9.73□□□□□ -0.85
SYNE1-203ENST00000354674 ZNF544Q6NX49 715 aa9.73□□□□□ -0.85
SYNE1-203ENST00000354674 ARSKQ6UWY0 536 aa9.73□□□□□ -0.85
SYNE1-203ENST00000354674 TMEM92Q6UXU6 159 aa9.73□□□□□ -0.85
SYNE1-203ENST00000354674 USP30Q70CQ3 517 aa9.73□□□□□ -0.85
SYNE1-203ENST00000354674 HDDC3Q8N4P3 179 aa9.73□□□□□ -0.85
SYNE1-203ENST00000354674 HEXDCQ8WVB3 486 aa9.73□□□□□ -0.85
SYNE1-203ENST00000354674 GIMAP1Q8WWP7 306 aa9.73□□□□□ -0.85
SYNE1-203ENST00000354674 SNX18Q96RF0 628 aa9.73□□□□□ -0.85
SYNE1-203ENST00000354674 KCNS3Q9BQ31 491 aa9.73□□□□□ -0.85
SYNE1-203ENST00000354674 MS4A7Q9GZW8 240 aaPredicted RBP9.73□□□□□ -0.85
SYNE1-203ENST00000354674 NUAK2Q9H093 628 aa9.73□□□□□ -0.85
SYNE1-203ENST00000354674 KCTD5Q9NXV2 234 aa9.73□□□□□ -0.85
SYNE1-203ENST00000354674 GALPQ9UBC7 116 aa9.73□□□□□ -0.85
SYNE1-203ENST00000354674 FZD4Q9ULV1 537 aa9.73□□□□□ -0.85
SYNE1-203ENST00000354674 RUVBL2Q9Y230 463 aaKnown RBP9.73□□□□□ -0.85
SYNE1-203ENST00000354674 BTBD3Q9Y2F9 522 aa9.73□□□□□ -0.85
SYNE1-203ENST00000354674 MTF2Q9Y483 593 aaPredicted RBP9.73□□□□□ -0.85
SYNE1-203ENST00000354674 GIMAP1-GIMAP5A0A087WTJ2 511 aa9.73□□□□□ -0.85
SYNE1-203ENST00000354674 A0A1W2PP55 124 aa9.73□□□□□ -0.85
SYNE1-203ENST00000354674 FAM25AB3EWG3 89 aa9.73□□□□□ -0.85
SYNE1-203ENST00000354674 FAM25CB3EWG5 89 aa9.73□□□□□ -0.85
SYNE1-203ENST00000354674 FAM25GB3EWG6 89 aa9.73□□□□□ -0.85
SYNE1-203ENST00000354674 G3V2L1 256 aa9.73□□□□□ -0.85
SYNE1-203ENST00000354674 RHOBTB1O94844 696 aa9.73□□□□□ -0.85
SYNE1-203ENST00000354674 LTA4HP09960 611 aaKnown RBP9.73□□□□□ -0.85
SYNE1-203ENST00000354674 PSMA4P25789 261 aaKnown RBP9.73□□□□□ -0.85
SYNE1-203ENST00000354674 CBX5P45973 191 aa9.73□□□□□ -0.85
SYNE1-203ENST00000354674 HSPA14Q0VDF9 509 aa9.73□□□□□ -0.85
SYNE1-203ENST00000354674 FASTKQ14296 549 aaKnown RBP9.73□□□□□ -0.85
SYNE1-203ENST00000354674 DUSP7Q16829 419 aa9.73□□□□□ -0.85
SYNE1-203ENST00000354674 GPRC6AQ5T6X5 926 aa9.73□□□□□ -0.85
SYNE1-203ENST00000354674 GLYATQ6IB77 296 aa9.73□□□□□ -0.85
SYNE1-203ENST00000354674 NOXA1Q86UR1 476 aa9.73□□□□□ -0.85
SYNE1-203ENST00000354674 OR4M1Q8NGD0 313 aa9.73□□□□□ -0.85
SYNE1-203ENST00000354674 GRPEL2Q8TAA5 225 aa9.73□□□□□ -0.85
SYNE1-203ENST00000354674 RDH11Q8TC12 318 aa9.73□□□□□ -0.85
SYNE1-203ENST00000354674 CD200R1Q8TD46 325 aa9.73□□□□□ -0.85
SYNE1-203ENST00000354674 CXorf40AQ8TE69 158 aa9.73□□□□□ -0.85
SYNE1-203ENST00000354674 BTN2A2Q8WVV5 523 aa9.73□□□□□ -0.85
SYNE1-203ENST00000354674 NUS1Q96E22 293 aa9.73□□□□□ -0.85
SYNE1-203ENST00000354674 GIMAP5Q96F15 307 aa9.73□□□□□ -0.85
SYNE1-203ENST00000354674 COPS8Q99627 209 aa9.73□□□□□ -0.85
SYNE1-203ENST00000354674 SPAG4Q9NPE6 437 aa9.73□□□□□ -0.85
SYNE1-203ENST00000354674 PAK1IP1Q9NWT1 392 aaPredicted RBP9.73□□□□□ -0.85
SYNE1-203ENST00000354674 FBXL12Q9NXK8 326 aa9.73□□□□□ -0.85
SYNE1-203ENST00000354674 GLTPQ9NZD2 209 aa9.73□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms