RNA–Protein interactions for RNA: ENST00000353479.9

COL17A1-201, Transcript of collagen type XVII alpha 1 chain, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COL17A1, Length 5,734 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-201ENST00000353479 OAS3Q9Y6K5 1087 aaKnown RBP14.37□□□□□ -0.11
COL17A1-201ENST00000353479 PAPPAQ13219 1627 aa14.37□□□□□ -0.11
COL17A1-201ENST00000353479 PGRMC2O15173 223 aa14.37□□□□□ -0.11
COL17A1-201ENST00000353479 CREG1O75629 220 aa14.37□□□□□ -0.11
COL17A1-201ENST00000353479 GJB3O75712 270 aa14.37□□□□□ -0.11
COL17A1-201ENST00000353479 ETS2P15036 469 aa14.37□□□□□ -0.11
COL17A1-201ENST00000353479 TIA1P31483 386 aaKnown RBP eCLIP14.37□□□□□ -0.11
COL17A1-201ENST00000353479 FAM189BP81408 668 aa14.37□□□□□ -0.11
COL17A1-201ENST00000353479 ZNF630Q2M218 657 aaPredicted RBP14.37□□□□□ -0.11
COL17A1-201ENST00000353479 EMC10Q5UCC4 262 aa14.37□□□□□ -0.11
COL17A1-201ENST00000353479 PTCHD1Q96NR3 888 aa14.37□□□□□ -0.11
COL17A1-201ENST00000353479 MKS1Q9NXB0 559 aa14.37□□□□□ -0.11
COL17A1-201ENST00000353479 CCL26Q9Y258 94 aa14.37□□□□□ -0.11
COL17A1-201ENST00000353479 LAMB1P07942 1786 aa14.37□□□□□ -0.11
COL17A1-201ENST00000353479 ZNF823P16415 610 aa14.36□□□□□ -0.11
COL17A1-201ENST00000353479 XKP51811 444 aa14.36□□□□□ -0.11
COL17A1-201ENST00000353479 ARF5P84085 180 aa14.36□□□□□ -0.11
COL17A1-201ENST00000353479 FUBP1Q96AE4 644 aaKnown RBP14.36□□□□□ -0.11
COL17A1-201ENST00000353479 TRNT1Q96Q11 434 aaKnown RBP14.36□□□□□ -0.11
COL17A1-201ENST00000353479 GPER1Q99527 375 aa14.36□□□□□ -0.11
COL17A1-201ENST00000353479 ABCB10Q9NRK6 738 aa14.36□□□□□ -0.11
COL17A1-201ENST00000353479 CKLFQ9UBR5 152 aa14.36□□□□□ -0.11
COL17A1-201ENST00000353479 PDE10AQ9Y233 779 aa14.36□□□□□ -0.11
COL17A1-201ENST00000353479 NADKO95544 446 aaPredicted RBP14.36□□□□□ -0.11
COL17A1-201ENST00000353479 DNAJA1P31689 397 aaKnown RBP14.36□□□□□ -0.11
COL17A1-201ENST00000353479 ATP4BP51164 291 aa14.36□□□□□ -0.11
COL17A1-201ENST00000353479 RHAGQ02094 409 aa14.36□□□□□ -0.11
COL17A1-201ENST00000353479 ZCCHC12Q6PEW1 402 aa14.36□□□□□ -0.11
COL17A1-201ENST00000353479 ATCAYQ86WG3 371 aa14.36□□□□□ -0.11
COL17A1-201ENST00000353479 ZFAND4Q86XD8 727 aa14.36□□□□□ -0.11
COL17A1-201ENST00000353479 CSNK1A1LQ8N752 337 aa14.36□□□□□ -0.11
COL17A1-201ENST00000353479 OR4K17Q8NGC6 315 aa14.36□□□□□ -0.11
COL17A1-201ENST00000353479 OR6K6Q8NGW6 343 aa14.36□□□□□ -0.11
COL17A1-201ENST00000353479 PSMA8Q8TAA3 256 aa14.36□□□□□ -0.11
COL17A1-201ENST00000353479 SPPL3Q8TCT6 385 aa14.36□□□□□ -0.11
COL17A1-201ENST00000353479 NEK7Q8TDX7 302 aa14.36□□□□□ -0.11
COL17A1-201ENST00000353479 HSH2DQ96JZ2 352 aa14.36□□□□□ -0.11
COL17A1-201ENST00000353479 ZNF576Q9H609 170 aa14.36□□□□□ -0.11
COL17A1-201ENST00000353479 MS4A12Q9NXJ0 267 aa14.36□□□□□ -0.11
COL17A1-201ENST00000353479 OAZ3Q9UMX2 235 aa14.36□□□□□ -0.11
COL17A1-201ENST00000353479 MED31Q9Y3C7 131 aa14.36□□□□□ -0.11
COL17A1-201ENST00000353479 PDLIM1O00151 329 aa14.36□□□□□ -0.11
COL17A1-201ENST00000353479 DIRAS1O95057 198 aa14.36□□□□□ -0.11
COL17A1-201ENST00000353479 HOXC12P31275 282 aa14.36□□□□□ -0.11
COL17A1-201ENST00000353479 RGRP47804 291 aa14.36□□□□□ -0.11
COL17A1-201ENST00000353479 MTTPP55157 894 aa14.36□□□□□ -0.11
COL17A1-201ENST00000353479 PUS10Q3MIT2 529 aaKnown RBP14.36□□□□□ -0.11
COL17A1-201ENST00000353479 DPPA4Q7L190 304 aa14.36□□□□□ -0.11
COL17A1-201ENST00000353479 KRT77Q7Z794 578 aa14.36□□□□□ -0.11
COL17A1-201ENST00000353479 OR52E4Q8NGH9 312 aa14.36□□□□□ -0.11
COL17A1-201ENST00000353479 WDR60Q8WVS4 1066 aa14.36□□□□□ -0.11
COL17A1-201ENST00000353479 SLC39A13Q96H72 371 aa14.36□□□□□ -0.11
COL17A1-201ENST00000353479 SMIM14Q96QK8 99 aa14.36□□□□□ -0.11
COL17A1-201ENST00000353479 METTL7AQ9H8H3 244 aa14.36□□□□□ -0.11
COL17A1-201ENST00000353479 CLEC4AQ9UMR7 237 aa14.36□□□□□ -0.11
COL17A1-201ENST00000353479 CLDN2P57739 230 aa14.36□□□□□ -0.11
COL17A1-201ENST00000353479 OR2T5Q6IEZ7 315 aa14.36□□□□□ -0.11
COL17A1-201ENST00000353479 UNC5DQ6UXZ4 953 aa14.36□□□□□ -0.11
COL17A1-201ENST00000353479 ANKRD33Q7Z3H0 272 aa14.36□□□□□ -0.11
COL17A1-201ENST00000353479 ISCA2Q86U28 154 aa14.36□□□□□ -0.11
COL17A1-201ENST00000353479 OR2T29Q8NH02 315 aa14.36□□□□□ -0.11
COL17A1-201ENST00000353479 SLC22A12Q96S37 553 aa14.36□□□□□ -0.11
COL17A1-201ENST00000353479 NODALQ96S42 347 aa14.36□□□□□ -0.11
COL17A1-201ENST00000353479 PLGRKTQ9HBL7 147 aa14.36□□□□□ -0.11
COL17A1-201ENST00000353479 FAM189A1O60320 539 aa14.36□□□□□ -0.11
COL17A1-201ENST00000353479 ACVR2AP27037 513 aa14.36□□□□□ -0.11
COL17A1-201ENST00000353479 LCN1P1Q5VSP4 162 aa14.36□□□□□ -0.11
COL17A1-201ENST00000353479 CBARPQ8N350 705 aaPredicted RBP14.36□□□□□ -0.11
COL17A1-201ENST00000353479 TMBIM1Q969X1 311 aa14.36□□□□□ -0.11
COL17A1-201ENST00000353479 CPEB1Q9BZB8 566 aaKnown RBP14.36□□□□□ -0.11
COL17A1-201ENST00000353479 FARSBQ9NSD9 589 aaKnown RBP14.36□□□□□ -0.11
COL17A1-201ENST00000353479 FHP07954 510 aa14.35□□□□□ -0.11
COL17A1-201ENST00000353479 BCKDHAP12694 445 aa14.35□□□□□ -0.11
COL17A1-201ENST00000353479 GJA4P35212 333 aa14.35□□□□□ -0.11
COL17A1-201ENST00000353479 CCINQ13939 588 aa14.35□□□□□ -0.11
COL17A1-201ENST00000353479 DAG1Q14118 895 aa14.35□□□□□ -0.11
COL17A1-201ENST00000353479 SLC44A4Q53GD3 710 aa14.35□□□□□ -0.11
COL17A1-201ENST00000353479 GAREM2Q75VX8 874 aa14.35□□□□□ -0.11
COL17A1-201ENST00000353479 GALNT7Q86SF2 657 aa14.35□□□□□ -0.11
COL17A1-201ENST00000353479 HUS1BQ8NHY5 278 aa14.35□□□□□ -0.11
COL17A1-201ENST00000353479 APOOQ9BUR5 198 aa14.35□□□□□ -0.11
COL17A1-201ENST00000353479 FTSJ1Q9UET6 329 aa14.35□□□□□ -0.11
COL17A1-201ENST00000353479 WDR45Q9Y484 360 aa14.35□□□□□ -0.11
COL17A1-201ENST00000353479 RTCAO00442 366 aaKnown RBP14.35□□□□□ -0.11
COL17A1-201ENST00000353479 ARFIP1P53367 373 aa14.35□□□□□ -0.11
COL17A1-201ENST00000353479 RPS15AP62244 130 aaKnown RBP14.35□□□□□ -0.11
COL17A1-201ENST00000353479 TANGO2Q6ICL3 276 aa14.35□□□□□ -0.11
COL17A1-201ENST00000353479 PYURFQ96I23 114 aa14.35□□□□□ -0.11
COL17A1-201ENST00000353479 MEAF6Q9HAF1 191 aa14.35□□□□□ -0.11
COL17A1-201ENST00000353479 ACTR3BQ9P1U1 418 aa14.35□□□□□ -0.11
COL17A1-201ENST00000353479 SLC16A8O95907 504 aa14.35□□□□□ -0.11
COL17A1-201ENST00000353479 TIMP2P16035 220 aa14.35□□□□□ -0.11
COL17A1-201ENST00000353479 RAB28P51157 221 aa14.35□□□□□ -0.11
COL17A1-201ENST00000353479 NIPAL1Q6NVV3 410 aa14.35□□□□□ -0.11
COL17A1-201ENST00000353479 MZT2BQ6NZ67 158 aa14.35□□□□□ -0.11
COL17A1-201ENST00000353479 C12orf40Q86WS4 652 aa14.35□□□□□ -0.11
COL17A1-201ENST00000353479 BIRC7Q96CA5 298 aa14.35□□□□□ -0.11
COL17A1-201ENST00000353479 AURKBQ96GD4 344 aaPredicted RBP14.35□□□□□ -0.11
COL17A1-201ENST00000353479 GEMIN8Q9NWZ8 242 aaKnown RBP14.35□□□□□ -0.11
COL17A1-201ENST00000353479 BTBD3Q9Y2F9 522 aa14.35□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms