RNA–Protein interactions for RNA: ENST00000351691.9

TRAF3-202, Transcript of TNF receptor associated factor 3, humanhuman

TSL 1 (best) BASIC

Gene TRAF3, Length 2,239 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-202ENST00000351691 ADAMDEC1O15204 470 aa14.4□□□□□ -0.1
TRAF3-202ENST00000351691 PRAMEF11O60813 436 aa14.4□□□□□ -0.1
TRAF3-202ENST00000351691 ULK1O75385 1050 aa14.4□□□□□ -0.1
TRAF3-202ENST00000351691 IL1AP01583 271 aa14.4□□□□□ -0.1
TRAF3-202ENST00000351691 AZGP1P25311 298 aaKnown RBP14.4□□□□□ -0.1
TRAF3-202ENST00000351691 TTPAP49638 278 aa14.4□□□□□ -0.1
TRAF3-202ENST00000351691 SRP54P61011 504 aaKnown RBP14.4□□□□□ -0.1
TRAF3-202ENST00000351691 HTRA3P83110 453 aa14.4□□□□□ -0.1
TRAF3-202ENST00000351691 EFEMP1Q12805 493 aa14.4□□□□□ -0.1
TRAF3-202ENST00000351691 HKDC1Q2TB90 917 aa14.4□□□□□ -0.1
TRAF3-202ENST00000351691 MZT2BQ6NZ67 158 aa14.4□□□□□ -0.1
TRAF3-202ENST00000351691 Q6ZPB1 254 aaPredicted RBP14.4□□□□□ -0.1
TRAF3-202ENST00000351691 GPR155Q7Z3F1 870 aa14.4□□□□□ -0.1
TRAF3-202ENST00000351691 SLC43A3Q8NBI5 491 aa14.4□□□□□ -0.1
TRAF3-202ENST00000351691 OR4M2Q8NGB6 313 aa14.4□□□□□ -0.1
TRAF3-202ENST00000351691 USP7Q93009 1102 aa14.4□□□□□ -0.1
TRAF3-202ENST00000351691 GPR137Q96N19 417 aa14.4□□□□□ -0.1
TRAF3-202ENST00000351691 HHATLQ9HCP6 504 aa14.4□□□□□ -0.1
TRAF3-202ENST00000351691 TLR8Q9NR97 1041 aaKnown RBP14.4□□□□□ -0.1
TRAF3-202ENST00000351691 ENOPH1Q9UHY7 261 aa14.4□□□□□ -0.1
TRAF3-202ENST00000351691 PHF11Q9UIL8 331 aa14.4□□□□□ -0.1
TRAF3-202ENST00000351691 POLHQ9Y253 713 aa14.4□□□□□ -0.1
TRAF3-202ENST00000351691 KCNE2Q9Y6J6 123 aa14.4□□□□□ -0.1
TRAF3-202ENST00000351691 FRMPD3Q5JV73 1810 aa14.4□□□□□ -0.1
TRAF3-202ENST00000351691 CASP8AP2Q9UKL3 1982 aa14.4□□□□□ -0.1
TRAF3-202ENST00000351691 MEN1O00255 615 aa14.39□□□□□ -0.11
TRAF3-202ENST00000351691 SLC43A1O75387 559 aa14.39□□□□□ -0.11
TRAF3-202ENST00000351691 SLC22A5O76082 557 aa14.39□□□□□ -0.11
TRAF3-202ENST00000351691 HMBSP08397 361 aa14.39□□□□□ -0.11
TRAF3-202ENST00000351691 PRSS56P0CW18 603 aa14.39□□□□□ -0.11
TRAF3-202ENST00000351691 CRYBB2P43320 205 aa14.39□□□□□ -0.11
TRAF3-202ENST00000351691 MAP2K3P46734 347 aa14.39□□□□□ -0.11
TRAF3-202ENST00000351691 CYP4F2P78329 520 aa14.39□□□□□ -0.11
TRAF3-202ENST00000351691 FAM189BP81408 668 aa14.39□□□□□ -0.11
TRAF3-202ENST00000351691 CTSL3PQ5NE16 218 aa14.39□□□□□ -0.11
TRAF3-202ENST00000351691 ALG1LQ6GMV1 187 aa14.39□□□□□ -0.11
TRAF3-202ENST00000351691 SDE2Q6IQ49 451 aa14.39□□□□□ -0.11
TRAF3-202ENST00000351691 RGL4Q8IZJ4 473 aa14.39□□□□□ -0.11
TRAF3-202ENST00000351691 NLGN4YQ8NFZ3 816 aaPredicted RBP14.39□□□□□ -0.11
TRAF3-202ENST00000351691 NELL1Q92832 810 aa14.39□□□□□ -0.11
TRAF3-202ENST00000351691 IGSF8Q969P0 613 aa14.39□□□□□ -0.11
TRAF3-202ENST00000351691 CAPNS2Q96L46 248 aa14.39□□□□□ -0.11
TRAF3-202ENST00000351691 FEVQ99581 238 aa14.39□□□□□ -0.11
TRAF3-202ENST00000351691 CCM2Q9BSQ5 444 aa14.39□□□□□ -0.11
TRAF3-202ENST00000351691 NTMT1Q9BV86 223 aa14.39□□□□□ -0.11
TRAF3-202ENST00000351691 HDHD5Q9BXW7 423 aa14.39□□□□□ -0.11
TRAF3-202ENST00000351691 IMPAD1Q9NX62 359 aa14.39□□□□□ -0.11
TRAF3-202ENST00000351691 TNFRSF10DQ9UBN6 386 aa14.39□□□□□ -0.11
TRAF3-202ENST00000351691 GABRQQ9UN88 632 aa14.39□□□□□ -0.11
TRAF3-202ENST00000351691 DUSP12Q9UNI6 340 aa14.39□□□□□ -0.11
TRAF3-202ENST00000351691 HSPB11Q9Y547 144 aa14.39□□□□□ -0.11
TRAF3-202ENST00000351691 HYKKA2RU49 373 aa14.39□□□□□ -0.11
TRAF3-202ENST00000351691 FABP12A6NFH5 140 aa14.39□□□□□ -0.11
TRAF3-202ENST00000351691 F8W810 466 aa14.39□□□□□ -0.11
TRAF3-202ENST00000351691 MANBAO00462 879 aa14.39□□□□□ -0.11
TRAF3-202ENST00000351691 RFXANKO14593 260 aa14.39□□□□□ -0.11
TRAF3-202ENST00000351691 PLD2O14939 933 aa14.39□□□□□ -0.11
TRAF3-202ENST00000351691 MYL12BO14950 172 aa14.39□□□□□ -0.11
TRAF3-202ENST00000351691 EBLN1P0CF75 366 aa14.39□□□□□ -0.11
TRAF3-202ENST00000351691 ACPPP15309 386 aa14.39□□□□□ -0.11
TRAF3-202ENST00000351691 MYL12AP19105 171 aa14.39□□□□□ -0.11
TRAF3-202ENST00000351691 PSMA1P25786 263 aaKnown RBP14.39□□□□□ -0.11
TRAF3-202ENST00000351691 PTBP1P26599 531 aaKnown RBP eCLIP14.39□□□□□ -0.11
TRAF3-202ENST00000351691 HOXD10P28358 340 aa14.39□□□□□ -0.11
TRAF3-202ENST00000351691 CDKN2CP42773 168 aa14.39□□□□□ -0.11
TRAF3-202ENST00000351691 CLDN20P56880 219 aa14.39□□□□□ -0.11
TRAF3-202ENST00000351691 RRAS2P62070 204 aaPredicted RBP14.39□□□□□ -0.11
TRAF3-202ENST00000351691 KCNJ10P78508 379 aa14.39□□□□□ -0.11
TRAF3-202ENST00000351691 VEPH1Q14D04 833 aa14.39□□□□□ -0.11
TRAF3-202ENST00000351691 KCNA10Q16322 511 aa14.39□□□□□ -0.11
TRAF3-202ENST00000351691 ZNF800Q2TB10 664 aaPredicted RBP eCLIP14.39□□□□□ -0.11
TRAF3-202ENST00000351691 RNLSQ5VYX0 342 aa14.39□□□□□ -0.11
TRAF3-202ENST00000351691 SLC24A5Q71RS6 500 aa14.39□□□□□ -0.11
TRAF3-202ENST00000351691 PTOV1Q86YD1 416 aa14.39□□□□□ -0.11
TRAF3-202ENST00000351691 SLC44A2Q8IWA5 706 aaPredicted RBP14.39□□□□□ -0.11
TRAF3-202ENST00000351691 ZNF557Q8N988 423 aaPredicted RBP14.39□□□□□ -0.11
TRAF3-202ENST00000351691 PCSK9Q8NBP7 692 aaKnown RBP14.39□□□□□ -0.11
TRAF3-202ENST00000351691 FBXO32Q969P5 355 aa14.39□□□□□ -0.11
TRAF3-202ENST00000351691 SLC25A46Q96AG3 418 aa14.39□□□□□ -0.11
TRAF3-202ENST00000351691 ULK4Q96C45 1275 aa14.39□□□□□ -0.11
TRAF3-202ENST00000351691 SEMA3CQ99985 751 aa14.39□□□□□ -0.11
TRAF3-202ENST00000351691 MIXL1Q9H2W2 232 aa14.39□□□□□ -0.11
TRAF3-202ENST00000351691 RBFOX1Q9NWB1 397 aaKnown RBP14.39□□□□□ -0.11
TRAF3-202ENST00000351691 MARCH2Q9P0N8 246 aa14.39□□□□□ -0.11
TRAF3-202ENST00000351691 LSM2Q9Y333 95 aaKnown RBP14.39□□□□□ -0.11
TRAF3-202ENST00000351691 TNFRSF11BO00300 401 aa14.38□□□□□ -0.11
TRAF3-202ENST00000351691 PITPNM1O00562 1244 aa14.38□□□□□ -0.11
TRAF3-202ENST00000351691 NIPSNAP2O75323 286 aa14.38□□□□□ -0.11
TRAF3-202ENST00000351691 RFPL3O75679 317 aa14.38□□□□□ -0.11
TRAF3-202ENST00000351691 DDX5P17844 614 aaKnown RBP14.38□□□□□ -0.11
TRAF3-202ENST00000351691 DAB2P98082 770 aa14.38□□□□□ -0.11
TRAF3-202ENST00000351691 HMGCS1Q01581 520 aa14.38□□□□□ -0.11
TRAF3-202ENST00000351691 TP53BP2Q13625 1128 aa14.38□□□□□ -0.11
TRAF3-202ENST00000351691 TAF1AQ15573 450 aaPredicted RBP14.38□□□□□ -0.11
TRAF3-202ENST00000351691 FAM214AQ32MH5 1076 aa14.38□□□□□ -0.11
TRAF3-202ENST00000351691 MEDAGQ5VYS4 303 aa14.38□□□□□ -0.11
TRAF3-202ENST00000351691 ZNF280BQ86YH2 543 aa14.38□□□□□ -0.11
TRAF3-202ENST00000351691 C9orf62Q8N4C0 152 aa14.38□□□□□ -0.11
TRAF3-202ENST00000351691 GALNT11Q8NCW6 608 aa14.38□□□□□ -0.11
TRAF3-202ENST00000351691 OR10G2Q8NGC3 310 aa14.38□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 66.5 ms