RNA–Protein interactions for RNA: ENST00000350697.7

SEC13-202, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SEC13, Length 1,425 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-202ENST00000350697 IL1RNP18510 177 aa13.24□□□□□ -0.29
SEC13-202ENST00000350697 ITGAXP20702 1163 aa13.24□□□□□ -0.29
SEC13-202ENST00000350697 ITPKBP27987 946 aa13.24□□□□□ -0.29
SEC13-202ENST00000350697 ALDH3A1P30838 453 aa13.24□□□□□ -0.29
SEC13-202ENST00000350697 PIK3CBP42338 1070 aa13.24□□□□□ -0.29
SEC13-202ENST00000350697 OR1D4P47884 311 aa13.24□□□□□ -0.29
SEC13-202ENST00000350697 AVPR1BP47901 424 aa13.24□□□□□ -0.29
SEC13-202ENST00000350697 UCNP55089 124 aa13.24□□□□□ -0.29
SEC13-202ENST00000350697 MAGOHP61326 146 aaKnown RBP13.24□□□□□ -0.29
SEC13-202ENST00000350697 RPS15P62841 145 aaKnown RBP13.24□□□□□ -0.29
SEC13-202ENST00000350697 PHEXP78562 749 aa13.24□□□□□ -0.29
SEC13-202ENST00000350697 ZRSR2Q15696 482 aaKnown RBP13.24□□□□□ -0.29
SEC13-202ENST00000350697 TOR1AIP1Q5JTV8 583 aa13.24□□□□□ -0.29
SEC13-202ENST00000350697 C10orf62Q5T681 223 aaPredicted RBP13.24□□□□□ -0.29
SEC13-202ENST00000350697 ARHGAP40Q5TG30 622 aa13.24□□□□□ -0.29
SEC13-202ENST00000350697 ADNP2Q6IQ32 1131 aa13.24□□□□□ -0.29
SEC13-202ENST00000350697 NIPAL1Q6NVV3 410 aa13.24□□□□□ -0.29
SEC13-202ENST00000350697 FRMD7Q6ZUT3 714 aa13.24□□□□□ -0.29
SEC13-202ENST00000350697 GPRIN3Q6ZVF9 776 aa13.24□□□□□ -0.29
SEC13-202ENST00000350697 AFAP1L2Q8N4X5 818 aa13.24□□□□□ -0.29
SEC13-202ENST00000350697 DTWD1Q8N5C7 304 aa13.24□□□□□ -0.29
SEC13-202ENST00000350697 ARFGAP2Q8N6H7 521 aa13.24□□□□□ -0.29
SEC13-202ENST00000350697 FAM76AQ8TAV0 307 aa13.24□□□□□ -0.29
SEC13-202ENST00000350697 UTP15Q8TED0 518 aaKnown RBP13.24□□□□□ -0.29
SEC13-202ENST00000350697 ZNF473Q8WTR7 871 aaKnown RBP13.24□□□□□ -0.29
SEC13-202ENST00000350697 COL26A1Q96A83 441 aa13.24□□□□□ -0.29
SEC13-202ENST00000350697 FKBP10Q96AY3 582 aa13.24□□□□□ -0.29
SEC13-202ENST00000350697 MMABQ96EY8 250 aaPredicted RBP13.24□□□□□ -0.29
SEC13-202ENST00000350697 ANKHQ9HCJ1 492 aa13.24□□□□□ -0.29
SEC13-202ENST00000350697 PRM3Q9NNZ6 103 aa13.24□□□□□ -0.29
SEC13-202ENST00000350697 SLC22A11Q9NSA0 550 aa13.24□□□□□ -0.29
SEC13-202ENST00000350697 TRPS1Q9UHF7 1281 aa13.24□□□□□ -0.29
SEC13-202ENST00000350697 GPN3Q9UHW5 284 aaPredicted RBP13.24□□□□□ -0.29
SEC13-202ENST00000350697 PCDHGA6Q9Y5G7 932 aa13.24□□□□□ -0.29
SEC13-202ENST00000350697 MAU2Q9Y6X3 613 aa13.24□□□□□ -0.29
SEC13-202ENST00000350697 SCN3AQ9NY46 2000 aa13.24□□□□□ -0.29
SEC13-202ENST00000350697 A0A1B0GTL3 188 aa13.23□□□□□ -0.29
SEC13-202ENST00000350697 LRIT2A6NDA9 550 aa13.23□□□□□ -0.29
SEC13-202ENST00000350697 H0YIG0 161 aa13.23□□□□□ -0.29
SEC13-202ENST00000350697 OR4F21O95013 312 aa13.23□□□□□ -0.29
SEC13-202ENST00000350697 TBX6O95947 436 aaPredicted RBP13.23□□□□□ -0.29
SEC13-202ENST00000350697 ALBP02768 609 aa13.23□□□□□ -0.29
SEC13-202ENST00000350697 BPGMP07738 259 aa13.23□□□□□ -0.29
SEC13-202ENST00000350697 ZNF888P0CJ79 500 aaPredicted RBP13.23□□□□□ -0.29
SEC13-202ENST00000350697 ALOX12P18054 663 aa13.23□□□□□ -0.29
SEC13-202ENST00000350697 FBLP22087 321 aaKnown RBP13.23□□□□□ -0.29
SEC13-202ENST00000350697 F8A1P23610 371 aa13.23□□□□□ -0.29
SEC13-202ENST00000350697 HNRNPH1P31943 449 aaKnown RBP13.23□□□□□ -0.29
SEC13-202ENST00000350697 PKNOX1P55347 436 aa13.23□□□□□ -0.29
SEC13-202ENST00000350697 SNRPNP63162 240 aaKnown RBP13.23□□□□□ -0.29
SEC13-202ENST00000350697 SKP1P63208 163 aa13.23□□□□□ -0.29
SEC13-202ENST00000350697 CBX1P83916 185 aa13.23□□□□□ -0.29
SEC13-202ENST00000350697 GABPB1Q06547 395 aaPredicted RBP13.23□□□□□ -0.29
SEC13-202ENST00000350697 SRSF6Q13247 344 aaKnown RBP13.23□□□□□ -0.29
SEC13-202ENST00000350697 DDX39BQ13838 428 aaKnown RBP13.23□□□□□ -0.29
SEC13-202ENST00000350697 DSG2Q14126 1118 aa13.23□□□□□ -0.29
SEC13-202ENST00000350697 MPP2Q14168 576 aa13.23□□□□□ -0.29
SEC13-202ENST00000350697 SLC9A5Q14940 896 aa13.23□□□□□ -0.29
SEC13-202ENST00000350697 NCF4Q15080 339 aa13.23□□□□□ -0.29
SEC13-202ENST00000350697 ADPRMQ3LIE5 342 aa13.23□□□□□ -0.29
SEC13-202ENST00000350697 MLIPQ5VWP3 458 aa13.23□□□□□ -0.29
SEC13-202ENST00000350697 TTC19Q6DKK2 380 aaPredicted RBP13.23□□□□□ -0.29
SEC13-202ENST00000350697 LETMD1Q6P1Q0 360 aa13.23□□□□□ -0.29
SEC13-202ENST00000350697 COX15Q7KZN9 410 aa13.23□□□□□ -0.29
SEC13-202ENST00000350697 OVCH1Q7RTY7 1134 aa13.23□□□□□ -0.29
SEC13-202ENST00000350697 PKD1L2Q7Z442 2459 aa13.23□□□□□ -0.29
SEC13-202ENST00000350697 ENDOVQ8N8Q3 282 aaKnown RBP13.23□□□□□ -0.29
SEC13-202ENST00000350697 OR9A4Q8NGU2 314 aa13.23□□□□□ -0.29
SEC13-202ENST00000350697 HUS1BQ8NHY5 278 aa13.23□□□□□ -0.29
SEC13-202ENST00000350697 WDR20Q8TBZ3 569 aa13.23□□□□□ -0.29
SEC13-202ENST00000350697 ZDHHC19Q8WVZ1 309 aaPredicted RBP13.23□□□□□ -0.29
SEC13-202ENST00000350697 GAL3ST3Q96A11 431 aa13.23□□□□□ -0.29
SEC13-202ENST00000350697 ARL8AQ96BM9 186 aa13.23□□□□□ -0.29
SEC13-202ENST00000350697 CMTM7Q96FZ5 175 aa13.23□□□□□ -0.29
SEC13-202ENST00000350697 SLC45A3Q96JT2 553 aa13.23□□□□□ -0.29
SEC13-202ENST00000350697 ATP6V1G3Q96LB4 118 aa13.23□□□□□ -0.29
SEC13-202ENST00000350697 MECRQ9BV79 373 aa13.23□□□□□ -0.29
SEC13-202ENST00000350697 GATA5Q9BWX5 397 aaPredicted RBP13.23□□□□□ -0.29
SEC13-202ENST00000350697 MS4A8Q9BY19 250 aa13.23□□□□□ -0.29
SEC13-202ENST00000350697 REXO4Q9GZR2 422 aaKnown RBP13.23□□□□□ -0.29
SEC13-202ENST00000350697 KLHL31Q9H511 634 aa13.23□□□□□ -0.29
SEC13-202ENST00000350697 IL17BQ9UHF5 180 aa13.23□□□□□ -0.29
SEC13-202ENST00000350697 ZNF225Q9UK10 706 aa13.23□□□□□ -0.29
SEC13-202ENST00000350697 FARSAQ9Y285 508 aaKnown RBP13.23□□□□□ -0.29
SEC13-202ENST00000350697 PADI2Q9Y2J8 665 aa13.23□□□□□ -0.29
SEC13-202ENST00000350697 MAP4K5Q9Y4K4 846 aa13.23□□□□□ -0.29
SEC13-202ENST00000350697 TMEM120BA0PK00 339 aa13.22□□□□□ -0.29
SEC13-202ENST00000350697 FOXE1O00358 373 aaPredicted RBP13.22□□□□□ -0.29
SEC13-202ENST00000350697 FFAR3O14843 346 aa13.22□□□□□ -0.29
SEC13-202ENST00000350697 GPR42O15529 346 aa13.22□□□□□ -0.29
SEC13-202ENST00000350697 GALR3O60755 368 aaPredicted RBP13.22□□□□□ -0.29
SEC13-202ENST00000350697 KLHL18O94889 574 aa13.22□□□□□ -0.29
SEC13-202ENST00000350697 ESRRBO95718 433 aa13.22□□□□□ -0.29
SEC13-202ENST00000350697 ENO1P06733 434 aaKnown RBP13.22□□□□□ -0.29
SEC13-202ENST00000350697 DHRS4L1P0CG22 281 aa13.22□□□□□ -0.29
SEC13-202ENST00000350697 ATXN8OSP0DMR3 200 aa13.22□□□□□ -0.29
SEC13-202ENST00000350697 SMIM10L1P0DMW3 83 aa13.22□□□□□ -0.29
SEC13-202ENST00000350697 PTPN4P29074 926 aa13.22□□□□□ -0.29
SEC13-202ENST00000350697 SERPINB4P48594 390 aa13.22□□□□□ -0.29
SEC13-202ENST00000350697 SLC18A1P54219 525 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms