RNA–Protein interactions for RNA: ENST00000348987.4

SCARF1-202, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best) BASIC

Gene SCARF1, Length 2,619 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-202ENST00000348987 NUDT4Q9NZJ9 180 aa17.97■□□□□ 0.47
SCARF1-202ENST00000348987 RABL2BQ9UNT1 228 aa17.97■□□□□ 0.47
SCARF1-202ENST00000348987 HSPB11Q9Y547 144 aa17.97■□□□□ 0.47
SCARF1-202ENST00000348987 TNPO3Q9Y5L0 923 aaKnown RBP17.97■□□□□ 0.47
SCARF1-202ENST00000348987 CFAP20Q9Y6A4 193 aaKnown RBP17.97■□□□□ 0.47
SCARF1-202ENST00000348987 MOXD2PA6NHM9 499 aa17.97■□□□□ 0.47
SCARF1-202ENST00000348987 ANKRD66B4E2M5 251 aa17.97■□□□□ 0.47
SCARF1-202ENST00000348987 RFXANKO14593 260 aa17.97■□□□□ 0.47
SCARF1-202ENST00000348987 STX7O15400 261 aaKnown RBP17.97■□□□□ 0.47
SCARF1-202ENST00000348987 LRATO95237 230 aa17.97■□□□□ 0.47
SCARF1-202ENST00000348987 F11P03951 625 aa17.97■□□□□ 0.47
SCARF1-202ENST00000348987 HOXB9P17482 250 aaPredicted RBP17.97■□□□□ 0.47
SCARF1-202ENST00000348987 LPOP22079 712 aaPredicted RBP17.97■□□□□ 0.47
SCARF1-202ENST00000348987 VMACQ2NL98 169 aa17.97■□□□□ 0.47
SCARF1-202ENST00000348987 ZNF767PQ75MW2 155 aa17.97■□□□□ 0.47
SCARF1-202ENST00000348987 FAM124AQ86V42 546 aa17.97■□□□□ 0.47
SCARF1-202ENST00000348987 GLCCI1Q86VQ1 547 aa17.97■□□□□ 0.47
SCARF1-202ENST00000348987 NLGN4YQ8NFZ3 816 aaPredicted RBP17.97■□□□□ 0.47
SCARF1-202ENST00000348987 TSSK3Q96PN8 268 aa17.97■□□□□ 0.47
SCARF1-202ENST00000348987 C12orf4Q9NQ89 552 aa17.97■□□□□ 0.47
SCARF1-202ENST00000348987 RPL17P18621 184 aaKnown RBP17.96■□□□□ 0.47
SCARF1-202ENST00000348987 TM4SF4P48230 202 aa17.96■□□□□ 0.47
SCARF1-202ENST00000348987 RORCP51449 518 aa17.96■□□□□ 0.47
SCARF1-202ENST00000348987 GPR17Q13304 367 aa17.96■□□□□ 0.47
SCARF1-202ENST00000348987 EIF4HQ15056 248 aaKnown RBP17.96■□□□□ 0.47
SCARF1-202ENST00000348987 IQCCQ4KMZ1 466 aa17.96■□□□□ 0.47
SCARF1-202ENST00000348987 LAMTOR1Q6IAA8 161 aa17.96■□□□□ 0.47
SCARF1-202ENST00000348987 ZNF556Q9HAH1 456 aa17.96■□□□□ 0.47
SCARF1-202ENST00000348987 MAN2B2Q9Y2E5 1009 aa17.96■□□□□ 0.47
SCARF1-202ENST00000348987 GBF1Q92538 1859 aa17.96■□□□□ 0.47
SCARF1-202ENST00000348987 TET1Q8NFU7 2136 aa17.96■□□□□ 0.47
SCARF1-202ENST00000348987 SLC28A1O00337 649 aa17.96■□□□□ 0.47
SCARF1-202ENST00000348987 KCNK5O95279 499 aa17.96■□□□□ 0.47
SCARF1-202ENST00000348987 CD160O95971 181 aa17.96■□□□□ 0.47
SCARF1-202ENST00000348987 RPLP2P05387 115 aaKnown RBP17.96■□□□□ 0.47
SCARF1-202ENST00000348987 GABRB1P18505 474 aa17.96■□□□□ 0.47
SCARF1-202ENST00000348987 SOX3P41225 446 aa17.96■□□□□ 0.47
SCARF1-202ENST00000348987 RPS14P62263 151 aaKnown RBP17.96■□□□□ 0.47
SCARF1-202ENST00000348987 MXD1Q05195 221 aa17.96■□□□□ 0.47
SCARF1-202ENST00000348987 CSTF3Q12996 717 aaKnown RBP17.96■□□□□ 0.47
SCARF1-202ENST00000348987 QPRTQ15274 297 aa17.96■□□□□ 0.47
SCARF1-202ENST00000348987 TATDN3Q17R31 274 aa17.96■□□□□ 0.47
SCARF1-202ENST00000348987 KRT73Q86Y46 540 aa17.96■□□□□ 0.47
SCARF1-202ENST00000348987 SLC23A1Q9UHI7 598 aa17.96■□□□□ 0.47
SCARF1-202ENST00000348987 CHD5Q8TDI0 1954 aa17.95■□□□□ 0.46
SCARF1-202ENST00000348987 KDELR3O43731 214 aa17.95■□□□□ 0.46
SCARF1-202ENST00000348987 SSTR4P31391 388 aa17.95■□□□□ 0.46
SCARF1-202ENST00000348987 TTLL9Q3SXZ7 439 aa17.95■□□□□ 0.46
SCARF1-202ENST00000348987 TOR1AIP1Q5JTV8 583 aa17.95■□□□□ 0.46
SCARF1-202ENST00000348987 CREB3L2Q70SY1 520 aa17.95■□□□□ 0.46
SCARF1-202ENST00000348987 CBLL1Q75N03 491 aa17.95■□□□□ 0.46
SCARF1-202ENST00000348987 EIF3MQ7L2H7 374 aaKnown RBP17.95■□□□□ 0.46
SCARF1-202ENST00000348987 ZZZ3Q8IYH5 903 aa17.95■□□□□ 0.46
SCARF1-202ENST00000348987 SLC5A8Q8N695 610 aa17.95■□□□□ 0.46
SCARF1-202ENST00000348987 OR52J3Q8NH60 311 aa17.95■□□□□ 0.46
SCARF1-202ENST00000348987 WDR36Q8NI36 951 aaKnown RBP17.95■□□□□ 0.46
SCARF1-202ENST00000348987 KLHL21Q9UJP4 597 aa17.95■□□□□ 0.46
SCARF1-202ENST00000348987 OGDHLQ9ULD0 1010 aa17.95■□□□□ 0.46
SCARF1-202ENST00000348987 CMAHPQ9Y471 501 aa17.95■□□□□ 0.46
SCARF1-202ENST00000348987 ARIH1Q9Y4X5 557 aaPredicted RBP17.95■□□□□ 0.46
SCARF1-202ENST00000348987 PDE4DIPQ5VU43 2346 aa17.95■□□□□ 0.46
SCARF1-202ENST00000348987 SLC38A8A6NNN8 435 aa17.95■□□□□ 0.46
SCARF1-202ENST00000348987 PLA2G10O15496 165 aa17.95■□□□□ 0.46
SCARF1-202ENST00000348987 FFAR2O15552 330 aa17.95■□□□□ 0.46
SCARF1-202ENST00000348987 TSC22D2O75157 780 aa17.95■□□□□ 0.46
SCARF1-202ENST00000348987 C1QBP02746 253 aa17.95■□□□□ 0.46
SCARF1-202ENST00000348987 IRF1P10914 325 aa17.95■□□□□ 0.46
SCARF1-202ENST00000348987 TACR1P25103 407 aa17.95■□□□□ 0.46
SCARF1-202ENST00000348987 HLA-DMAP28067 261 aa17.95■□□□□ 0.46
SCARF1-202ENST00000348987 PTGS2P35354 604 aa17.95■□□□□ 0.46
SCARF1-202ENST00000348987 MAPK12P53778 367 aa17.95■□□□□ 0.46
SCARF1-202ENST00000348987 SAXO2Q658L1 398 aa17.95■□□□□ 0.46
SCARF1-202ENST00000348987 SERPINA11Q86U17 422 aa17.95■□□□□ 0.46
SCARF1-202ENST00000348987 OR4M2Q8NGB6 313 aa17.95■□□□□ 0.46
SCARF1-202ENST00000348987 DNAJB8Q8NHS0 232 aa17.95■□□□□ 0.46
SCARF1-202ENST00000348987 ENKURQ8TC29 256 aa17.95■□□□□ 0.46
SCARF1-202ENST00000348987 C7orf34Q96L11 122 aa17.95■□□□□ 0.46
SCARF1-202ENST00000348987 EPYCQ99645 322 aa17.95■□□□□ 0.46
SCARF1-202ENST00000348987 ABCB9Q9NP78 766 aa17.95■□□□□ 0.46
SCARF1-202ENST00000348987 IMPAD1Q9NX62 359 aa17.95■□□□□ 0.46
SCARF1-202ENST00000348987 ELOVL2Q9NXB9 296 aa17.95■□□□□ 0.46
SCARF1-202ENST00000348987 PPT2Q9UMR5 302 aa17.95■□□□□ 0.46
SCARF1-202ENST00000348987 DUSP12Q9UNI6 340 aa17.95■□□□□ 0.46
SCARF1-202ENST00000348987 OR6C75A6NL08 312 aa17.94■□□□□ 0.46
SCARF1-202ENST00000348987 TAPBPO15533 448 aa17.94■□□□□ 0.46
SCARF1-202ENST00000348987 ALAS2P22557 587 aa17.94■□□□□ 0.46
SCARF1-202ENST00000348987 ATP5C1P36542 298 aaKnown RBP17.94■□□□□ 0.46
SCARF1-202ENST00000348987 SLC11A1P49279 550 aa17.94■□□□□ 0.46
SCARF1-202ENST00000348987 ARF5P84085 180 aa17.94■□□□□ 0.46
SCARF1-202ENST00000348987 RUNX1T1Q06455 604 aa17.94■□□□□ 0.46
SCARF1-202ENST00000348987 GLYR1Q49A26 553 aaPredicted RBP17.94■□□□□ 0.46
SCARF1-202ENST00000348987 PDZK1Q5T2W1 519 aa17.94■□□□□ 0.46
SCARF1-202ENST00000348987 SBSNQ6UWP8 590 aa17.94■□□□□ 0.46
SCARF1-202ENST00000348987 SLC44A2Q8IWA5 706 aaPredicted RBP17.94■□□□□ 0.46
SCARF1-202ENST00000348987 NIPSNAP1Q9BPW8 284 aa17.94■□□□□ 0.46
SCARF1-202ENST00000348987 TAPBPLQ9BX59 468 aa17.94■□□□□ 0.46
SCARF1-202ENST00000348987 HCN4Q9Y3Q4 1203 aa17.94■□□□□ 0.46
SCARF1-202ENST00000348987 PCDHGA2Q9Y5H1 932 aa17.94■□□□□ 0.46
SCARF1-202ENST00000348987 FABP12A6NFH5 140 aa17.94■□□□□ 0.46
SCARF1-202ENST00000348987 CLIC1O00299 241 aa17.94■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms