RNA–Protein interactions for RNA: ENST00000347635.8

NUP50-201, Transcript of nucleoporin 50, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP50, Length 5,233 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-201ENST00000347635 HEBP1Q9NRV9 189 aa14.24□□□□□ -0.13
NUP50-201ENST00000347635 MAP10Q9P2G4 905 aa14.24□□□□□ -0.13
NUP50-201ENST00000347635 NDRG2Q9UN36 371 aaKnown RBP14.24□□□□□ -0.13
NUP50-201ENST00000347635 PAPPA2Q9BXP8 1791 aa14.24□□□□□ -0.13
NUP50-201ENST00000347635 HSD17B2P37059 387 aa14.24□□□□□ -0.13
NUP50-201ENST00000347635 HTRA3P83110 453 aa14.24□□□□□ -0.13
NUP50-201ENST00000347635 HDDC3Q8N4P3 179 aa14.24□□□□□ -0.13
NUP50-201ENST00000347635 CHDHQ8NE62 594 aaPredicted RBP14.24□□□□□ -0.13
NUP50-201ENST00000347635 TBC1D15Q8TC07 691 aa14.24□□□□□ -0.13
NUP50-201ENST00000347635 ZSCAN5AQ9BUG6 496 aa14.24□□□□□ -0.13
NUP50-201ENST00000347635 CMAHPQ9Y471 501 aa14.24□□□□□ -0.13
NUP50-201ENST00000347635 KCNC3Q14003 757 aa14.24□□□□□ -0.13
NUP50-201ENST00000347635 ZNF776Q68DI1 518 aaPredicted RBP14.24□□□□□ -0.13
NUP50-201ENST00000347635 SRFBP1Q8NEF9 429 aaKnown RBP14.24□□□□□ -0.13
NUP50-201ENST00000347635 FAM46DQ8NEK8 389 aa14.24□□□□□ -0.13
NUP50-201ENST00000347635 TP53INP1Q96A56 240 aa14.24□□□□□ -0.13
NUP50-201ENST00000347635 TMEM80Q96HE8 168 aa14.24□□□□□ -0.13
NUP50-201ENST00000347635 GPR78Q96P69 363 aa14.24□□□□□ -0.13
NUP50-201ENST00000347635 WRAP53Q9BUR4 548 aaKnown RBP14.24□□□□□ -0.13
NUP50-201ENST00000347635 TRIT1Q9H3H1 467 aaKnown RBP14.24□□□□□ -0.13
NUP50-201ENST00000347635 EQTNQ9NQ60 294 aa14.24□□□□□ -0.13
NUP50-201ENST00000347635 DCAF13Q9NV06 445 aaKnown RBP14.24□□□□□ -0.13
NUP50-201ENST00000347635 SOHLH2Q9NX45 425 aa14.24□□□□□ -0.13
NUP50-201ENST00000347635 SLAMF8Q9P0V8 285 aa14.24□□□□□ -0.13
NUP50-201ENST00000347635 MALT1Q9UDY8 824 aa14.24□□□□□ -0.13
NUP50-201ENST00000347635 WNK3Q9BYP7 1800 aa14.24□□□□□ -0.13
NUP50-201ENST00000347635 MROH6A6NGR9 719 aa14.24□□□□□ -0.13
NUP50-201ENST00000347635 CCRL2O00421 344 aa14.24□□□□□ -0.13
NUP50-201ENST00000347635 YES1P07947 543 aa14.24□□□□□ -0.13
NUP50-201ENST00000347635 VIPR1P32241 457 aa14.24□□□□□ -0.13
NUP50-201ENST00000347635 CSTF2P33240 577 aaKnown RBP eCLIP14.24□□□□□ -0.13
NUP50-201ENST00000347635 BDKRB1P46663 353 aa14.24□□□□□ -0.13
NUP50-201ENST00000347635 OR1E2P47887 323 aa14.24□□□□□ -0.13
NUP50-201ENST00000347635 KEAP1Q14145 624 aa14.24□□□□□ -0.13
NUP50-201ENST00000347635 MFSD6LQ8IWD5 586 aa14.24□□□□□ -0.13
NUP50-201ENST00000347635 TRPV1Q8NER1 839 aa14.24□□□□□ -0.13
NUP50-201ENST00000347635 PIGXQ8TBF5 258 aa14.24□□□□□ -0.13
NUP50-201ENST00000347635 SLC35G5Q96KT7 338 aa14.24□□□□□ -0.13
NUP50-201ENST00000347635 DPH2Q9BQC3 489 aaPredicted RBP14.24□□□□□ -0.13
NUP50-201ENST00000347635 SPATA9Q9BWV2 254 aa14.24□□□□□ -0.13
NUP50-201ENST00000347635 MED28Q9H204 178 aa14.24□□□□□ -0.13
NUP50-201ENST00000347635 OCEL1Q9H607 264 aa14.24□□□□□ -0.13
NUP50-201ENST00000347635 SOCS5O75159 536 aa14.23□□□□□ -0.13
NUP50-201ENST00000347635 WBP4O75554 376 aaKnown RBP14.23□□□□□ -0.13
NUP50-201ENST00000347635 SHMT2P34897 504 aa14.23□□□□□ -0.13
NUP50-201ENST00000347635 HNF1BP35680 557 aa14.23□□□□□ -0.13
NUP50-201ENST00000347635 ZNF140P52738 457 aaPredicted RBP14.23□□□□□ -0.13
NUP50-201ENST00000347635 WDR5P61964 334 aaKnown RBP14.23□□□□□ -0.13
NUP50-201ENST00000347635 MACC1Q6ZN28 852 aa14.23□□□□□ -0.13
NUP50-201ENST00000347635 ZSWIM9Q86XI8 627 aa14.23□□□□□ -0.13
NUP50-201ENST00000347635 PROKR1Q8TCW9 393 aa14.23□□□□□ -0.13
NUP50-201ENST00000347635 CASD1Q96PB1 797 aa14.23□□□□□ -0.13
NUP50-201ENST00000347635 TRNT1Q96Q11 434 aaKnown RBP14.23□□□□□ -0.13
NUP50-201ENST00000347635 RAB11FIP5Q9BXF6 653 aa14.23□□□□□ -0.13
NUP50-201ENST00000347635 ABCD2Q9UBJ2 740 aa14.23□□□□□ -0.13
NUP50-201ENST00000347635 NDOR1Q9UHB4 597 aa14.23□□□□□ -0.13
NUP50-201ENST00000347635 ITM2BQ9Y287 266 aa14.23□□□□□ -0.13
NUP50-201ENST00000347635 PHIPQ8WWQ0 1821 aa14.23□□□□□ -0.13
NUP50-201ENST00000347635 C6orf47O95873 294 aa14.23□□□□□ -0.13
NUP50-201ENST00000347635 ALPLP05186 524 aa14.23□□□□□ -0.13
NUP50-201ENST00000347635 H1F0P07305 194 aaKnown RBP14.23□□□□□ -0.13
NUP50-201ENST00000347635 SLC2A2P11168 524 aaPredicted RBP14.23□□□□□ -0.13
NUP50-201ENST00000347635 GJA1P17302 382 aa14.23□□□□□ -0.13
NUP50-201ENST00000347635 SPCS2Q15005 226 aa14.23□□□□□ -0.13
NUP50-201ENST00000347635 LIPJQ5W064 366 aa14.23□□□□□ -0.13
NUP50-201ENST00000347635 CMTM8Q8IZV2 173 aa14.23□□□□□ -0.13
NUP50-201ENST00000347635 BRINP2Q9C0B6 783 aa14.23□□□□□ -0.13
NUP50-201ENST00000347635 ERVK-11Q9UQG0 969 aa14.23□□□□□ -0.13
NUP50-201ENST00000347635 GJB5O95377 273 aa14.23□□□□□ -0.13
NUP50-201ENST00000347635 BCHEP06276 602 aa14.23□□□□□ -0.13
NUP50-201ENST00000347635 RYKP34925 604 aa14.23□□□□□ -0.13
NUP50-201ENST00000347635 TRIM71Q2Q1W2 868 aaKnown RBP14.23□□□□□ -0.13
NUP50-201ENST00000347635 C22orf39Q6P5X5 142 aa14.23□□□□□ -0.13
NUP50-201ENST00000347635 FUNDC1Q8IVP5 155 aa14.23□□□□□ -0.13
NUP50-201ENST00000347635 ZBED6CLQ96FA7 236 aaPredicted RBP14.23□□□□□ -0.13
NUP50-201ENST00000347635 RIOK2Q9BVS4 552 aaKnown RBP14.23□□□□□ -0.13
NUP50-201ENST00000347635 KCNN2Q9H2S1 579 aa14.23□□□□□ -0.13
NUP50-201ENST00000347635 RFPL2O75678 378 aa14.23□□□□□ -0.13
NUP50-201ENST00000347635 PCCBP05166 539 aa14.23□□□□□ -0.13
NUP50-201ENST00000347635 ATXN1LP0C7T5 689 aaKnown RBP14.23□□□□□ -0.13
NUP50-201ENST00000347635 RPL34P49207 117 aaKnown RBP14.23□□□□□ -0.13
NUP50-201ENST00000347635 DGKEP52429 567 aa14.23□□□□□ -0.13
NUP50-201ENST00000347635 SEC13P55735 322 aa14.23□□□□□ -0.13
NUP50-201ENST00000347635 RPS13P62277 151 aaKnown RBP14.23□□□□□ -0.13
NUP50-201ENST00000347635 CCDC157Q569K6 752 aa14.23□□□□□ -0.13
NUP50-201ENST00000347635 NCEH1Q6PIU2 408 aa14.23□□□□□ -0.13
NUP50-201ENST00000347635 AGTRAPQ6RW13 159 aa14.23□□□□□ -0.13
NUP50-201ENST00000347635 MSANTD1Q6ZTZ1 278 aa14.23□□□□□ -0.13
NUP50-201ENST00000347635 SIX5Q8N196 739 aa14.23□□□□□ -0.13
NUP50-201ENST00000347635 MDGA1Q8NFP4 955 aa14.23□□□□□ -0.13
NUP50-201ENST00000347635 ARRDC2Q8TBH0 407 aa14.23□□□□□ -0.13
NUP50-201ENST00000347635 ITM2CQ9NQX7 267 aa14.23□□□□□ -0.13
NUP50-201ENST00000347635 SARDHQ9UL12 918 aa14.23□□□□□ -0.13
NUP50-201ENST00000347635 PCDHB11Q9Y5F2 797 aa14.23□□□□□ -0.13
NUP50-201ENST00000347635 ACTL7AQ9Y615 435 aa14.23□□□□□ -0.13
NUP50-201ENST00000347635 WNT6Q9Y6F9 365 aa14.23□□□□□ -0.13
NUP50-201ENST00000347635 KLK1P06870 262 aa14.22□□□□□ -0.13
NUP50-201ENST00000347635 GKP32189 559 aa14.22□□□□□ -0.13
NUP50-201ENST00000347635 DCP2Q8IU60 420 aaKnown RBP14.22□□□□□ -0.13
NUP50-201ENST00000347635 AVL9Q8NBF6 648 aa14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms