RNA–Protein interactions for RNA: ENST00000346436.10

CLCN6-202, Transcript of chloride voltage-gated channel 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLCN6, Length 5,583 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-202ENST00000346436 SLC5A8Q8N695 610 aa10.52□□□□□ -0.72
CLCN6-202ENST00000346436 OR4C15Q8NGM1 316 aa10.52□□□□□ -0.72
CLCN6-202ENST00000346436 OR10T2Q8NGX3 314 aa10.52□□□□□ -0.72
CLCN6-202ENST00000346436 PIGXQ8TBF5 258 aa10.52□□□□□ -0.72
CLCN6-202ENST00000346436 UBASH3BQ8TF42 649 aa10.52□□□□□ -0.72
CLCN6-202ENST00000346436 BIRC7Q96CA5 298 aa10.52□□□□□ -0.72
CLCN6-202ENST00000346436 TRNT1Q96Q11 434 aaKnown RBP10.52□□□□□ -0.72
CLCN6-202ENST00000346436 RBM4BQ9BQ04 359 aaKnown RBP10.52□□□□□ -0.72
CLCN6-202ENST00000346436 RBM4Q9BWF3 364 aaKnown RBP10.52□□□□□ -0.72
CLCN6-202ENST00000346436 RC3H2Q9HBD1 1191 aaKnown RBP10.52□□□□□ -0.72
CLCN6-202ENST00000346436 TAC3Q9UHF0 121 aa10.52□□□□□ -0.72
CLCN6-202ENST00000346436 SNAP29O95721 258 aa10.52□□□□□ -0.73
CLCN6-202ENST00000346436 GNALP38405 381 aa10.52□□□□□ -0.73
CLCN6-202ENST00000346436 ARHGDIBP52566 201 aa10.52□□□□□ -0.73
CLCN6-202ENST00000346436 PPP3R1P63098 170 aa10.52□□□□□ -0.73
CLCN6-202ENST00000346436 SERINC3Q13530 473 aa10.52□□□□□ -0.73
CLCN6-202ENST00000346436 RAPSNQ13702 412 aa10.52□□□□□ -0.73
CLCN6-202ENST00000346436 TRIM61Q5EBN2 209 aa10.52□□□□□ -0.73
CLCN6-202ENST00000346436 DCST1Q5T197 706 aa10.52□□□□□ -0.73
CLCN6-202ENST00000346436 NODALQ96S42 347 aa10.52□□□□□ -0.73
CLCN6-202ENST00000346436 WBP1LQ9NX94 342 aa10.52□□□□□ -0.73
CLCN6-202ENST00000346436 SMCHD1A6NHR9 2005 aa10.52□□□□□ -0.73
CLCN6-202ENST00000346436 E7EQ34 232 aa10.52□□□□□ -0.73
CLCN6-202ENST00000346436 H0YC42 278 aa10.52□□□□□ -0.73
CLCN6-202ENST00000346436 SCGB2A1O75556 95 aa10.52□□□□□ -0.73
CLCN6-202ENST00000346436 MYL9P24844 172 aa10.52□□□□□ -0.73
CLCN6-202ENST00000346436 NCBP2P52298 156 aaKnown RBP eCLIP10.52□□□□□ -0.732e-8■■□□□ 13.6
CLCN6-202ENST00000346436 MYBPC3Q14896 1274 aa10.52□□□□□ -0.73
CLCN6-202ENST00000346436 LRRC66Q68CR7 880 aa10.52□□□□□ -0.73
CLCN6-202ENST00000346436 ERI1Q8IV48 349 aaKnown RBP10.52□□□□□ -0.73
CLCN6-202ENST00000346436 LRRC3Q9BY71 257 aa10.52□□□□□ -0.73
CLCN6-202ENST00000346436 GPN2Q9H9Y4 310 aaPredicted RBP10.52□□□□□ -0.73
CLCN6-202ENST00000346436 SAMD4AQ9UPU9 718 aaKnown RBP10.52□□□□□ -0.73
CLCN6-202ENST00000346436 PCDHGB1Q9Y5G3 927 aa10.52□□□□□ -0.73
CLCN6-202ENST00000346436 TRIM43BA6NCK2 446 aa10.52□□□□□ -0.73
CLCN6-202ENST00000346436 AQP12BA6NM10 295 aa10.52□□□□□ -0.73
CLCN6-202ENST00000346436 PTGESO14684 152 aa10.52□□□□□ -0.73
CLCN6-202ENST00000346436 MTX2O75431 263 aa10.52□□□□□ -0.73
CLCN6-202ENST00000346436 PRKD3O94806 890 aa10.52□□□□□ -0.73
CLCN6-202ENST00000346436 IL6P05231 212 aa10.52□□□□□ -0.73
CLCN6-202ENST00000346436 HOXC13P31276 330 aa10.52□□□□□ -0.73
CLCN6-202ENST00000346436 CRISP3P54108 245 aa10.52□□□□□ -0.73
CLCN6-202ENST00000346436 CDKL1Q00532 357 aa10.52□□□□□ -0.73
CLCN6-202ENST00000346436 HSPB3Q12988 150 aa10.52□□□□□ -0.73
CLCN6-202ENST00000346436 C6orf132Q5T0Z8 1188 aa10.52□□□□□ -0.73
CLCN6-202ENST00000346436 ARL9Q6T311 187 aa10.52□□□□□ -0.73
CLCN6-202ENST00000346436 AQP12AQ8IXF9 295 aa10.52□□□□□ -0.73
CLCN6-202ENST00000346436 NAA11Q9BSU3 229 aaPredicted RBP10.52□□□□□ -0.73
CLCN6-202ENST00000346436 TRIM2Q9C040 744 aa10.52□□□□□ -0.73
CLCN6-202ENST00000346436 TMLHEQ9NVH6 421 aa10.52□□□□□ -0.73
CLCN6-202ENST00000346436 TOR4AQ9NXH8 423 aa10.52□□□□□ -0.73
CLCN6-202ENST00000346436 SLC39A1Q9NY26 324 aa10.52□□□□□ -0.73
CLCN6-202ENST00000346436 TMEM98Q9Y2Y6 226 aa10.52□□□□□ -0.73
CLCN6-202ENST00000346436 PROS1P07225 676 aa10.51□□□□□ -0.73
CLCN6-202ENST00000346436 CD38P28907 300 aa10.51□□□□□ -0.73
CLCN6-202ENST00000346436 HHEXQ03014 270 aa10.51□□□□□ -0.73
CLCN6-202ENST00000346436 SLBPQ14493 270 aaKnown RBP eCLIP10.51□□□□□ -0.73
CLCN6-202ENST00000346436 ZNF846Q147U1 533 aa10.51□□□□□ -0.73
CLCN6-202ENST00000346436 UNC50Q53HI1 259 aa10.51□□□□□ -0.73
CLCN6-202ENST00000346436 PRPF38BQ5VTL8 546 aaKnown RBP10.51□□□□□ -0.73
CLCN6-202ENST00000346436 SMYD5Q6GMV2 418 aa10.51□□□□□ -0.73
CLCN6-202ENST00000346436 KRT74Q7RTS7 529 aa10.51□□□□□ -0.73
CLCN6-202ENST00000346436 LRRC70Q7Z2Q7 622 aa10.51□□□□□ -0.73
CLCN6-202ENST00000346436 MAVSQ7Z434 540 aa10.51□□□□□ -0.73
CLCN6-202ENST00000346436 COX4I2Q96KJ9 171 aa10.51□□□□□ -0.73
CLCN6-202ENST00000346436 B4GALT6Q9UBX8 382 aa10.51□□□□□ -0.73
CLCN6-202ENST00000346436 ACAD8Q9UKU7 415 aa10.51□□□□□ -0.73
CLCN6-202ENST00000346436 ANKRD12Q6UB98 2062 aa10.51□□□□□ -0.73
CLCN6-202ENST00000346436 MYADML2A6NDP7 307 aa10.51□□□□□ -0.73
CLCN6-202ENST00000346436 NPIPA5E9PKD4 350 aa10.51□□□□□ -0.73
CLCN6-202ENST00000346436 CBFA2T3O75081 653 aa10.51□□□□□ -0.73
CLCN6-202ENST00000346436 TULP3O75386 442 aa10.51□□□□□ -0.73
CLCN6-202ENST00000346436 GALK2Q01415 458 aa10.51□□□□□ -0.73
CLCN6-202ENST00000346436 MEP1AQ16819 746 aa10.51□□□□□ -0.73
CLCN6-202ENST00000346436 DUOXA1Q1HG43 343 aa10.51□□□□□ -0.73
CLCN6-202ENST00000346436 TRAM1L1Q8N609 369 aa10.51□□□□□ -0.73
CLCN6-202ENST00000346436 AGBL5Q8NDL9 886 aa10.51□□□□□ -0.73
CLCN6-202ENST00000346436 MCFD2Q8NI22 146 aa10.51□□□□□ -0.73
CLCN6-202ENST00000346436 FGF13Q92913 245 aa10.51□□□□□ -0.73
CLCN6-202ENST00000346436 IGSF8Q969P0 613 aa10.51□□□□□ -0.73
CLCN6-202ENST00000346436 PTCHD1Q96NR3 888 aa10.51□□□□□ -0.73
CLCN6-202ENST00000346436 OR8D2Q9GZM6 311 aa10.51□□□□□ -0.73
CLCN6-202ENST00000346436 TPK1Q9H3S4 243 aa10.51□□□□□ -0.73
CLCN6-202ENST00000346436 PISDQ9UG56 409 aa10.51□□□□□ -0.73
CLCN6-202ENST00000346436 GPR160Q9UJ42 338 aa10.51□□□□□ -0.73
CLCN6-202ENST00000346436 NPIPA1Q9UND3 350 aa10.51□□□□□ -0.73
CLCN6-202ENST00000346436 TESMINQ9Y4I5 508 aa10.51□□□□□ -0.73
CLCN6-202ENST00000346436 NUMBLQ9Y6R0 609 aa10.51□□□□□ -0.73
CLCN6-202ENST00000346436 GJE1A6NN92 205 aa10.51□□□□□ -0.73
CLCN6-202ENST00000346436 RAP2AP10114 183 aa10.51□□□□□ -0.73
CLCN6-202ENST00000346436 GKP32189 559 aa10.51□□□□□ -0.73
CLCN6-202ENST00000346436 DEFB103AP81534 67 aa10.51□□□□□ -0.73
CLCN6-202ENST00000346436 LRRC26Q2I0M4 334 aa10.51□□□□□ -0.73
CLCN6-202ENST00000346436 ZNF311Q5JNZ3 666 aa10.51□□□□□ -0.73
CLCN6-202ENST00000346436 C10orf62Q5T681 223 aaPredicted RBP10.51□□□□□ -0.73
CLCN6-202ENST00000346436 ZDHHC21Q8IVQ6 265 aa10.51□□□□□ -0.73
CLCN6-202ENST00000346436 MARVELD2Q8N4S9 558 aa10.51□□□□□ -0.73
CLCN6-202ENST00000346436 KCT2Q8NC54 265 aa10.51□□□□□ -0.73
CLCN6-202ENST00000346436 OR4F6Q8NGB9 312 aa10.51□□□□□ -0.73
CLCN6-202ENST00000346436 NANOS1Q8WY41 292 aaKnown RBP10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms