RNA–Protein interactions for RNA: ENST00000344626.8

SMARCA4-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 1 (best) BASIC

Gene SMARCA4, Length 5,392 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-201ENST00000344626 SLC6A18Q96N87 628 aa15.8■□□□□ 0.12
SMARCA4-201ENST00000344626 COL21A1Q96P44 957 aa15.8■□□□□ 0.12
SMARCA4-201ENST00000344626 REEP4Q9H6H4 257 aa15.8■□□□□ 0.12
SMARCA4-201ENST00000344626 MARK1Q9P0L2 795 aa15.8■□□□□ 0.12
SMARCA4-201ENST00000344626 HS3ST2Q9Y278 367 aa15.8■□□□□ 0.12
SMARCA4-201ENST00000344626 RRP8O43159 456 aaKnown RBP15.8■□□□□ 0.12
SMARCA4-201ENST00000344626 BCL10O95999 233 aa15.8■□□□□ 0.12
SMARCA4-201ENST00000344626 NR2C1P13056 603 aa15.8■□□□□ 0.12
SMARCA4-201ENST00000344626 ACSL1P33121 698 aa15.8■□□□□ 0.12
SMARCA4-201ENST00000344626 YPEL5P62699 121 aa15.8■□□□□ 0.12
SMARCA4-201ENST00000344626 ZNF77Q15935 545 aa15.8■□□□□ 0.12
SMARCA4-201ENST00000344626 GPR150Q8NGU9 434 aa15.8■□□□□ 0.12
SMARCA4-201ENST00000344626 R4GN57 208 aa15.8■□□□□ 0.12
SMARCA4-201ENST00000344626 B4GALT3O60512 393 aa15.8■□□□□ 0.12
SMARCA4-201ENST00000344626 RACK1P63244 317 aaKnown RBP15.8■□□□□ 0.12
SMARCA4-201ENST00000344626 CDK3Q00526 305 aa15.8■□□□□ 0.12
SMARCA4-201ENST00000344626 RREB1Q92766 1687 aa15.8■□□□□ 0.12
SMARCA4-201ENST00000344626 AHCYP23526 432 aa15.79■□□□□ 0.12
SMARCA4-201ENST00000344626 IL4RP24394 825 aa15.79■□□□□ 0.12
SMARCA4-201ENST00000344626 GBX1Q14549 363 aa15.79■□□□□ 0.12
SMARCA4-201ENST00000344626 DGUOKQ16854 277 aa15.79■□□□□ 0.12
SMARCA4-201ENST00000344626 RFKQ969G6 155 aa15.79■□□□□ 0.12
SMARCA4-201ENST00000344626 TRAPPC9Q96Q05 1148 aa15.79■□□□□ 0.12
SMARCA4-201ENST00000344626 SPATA9Q9BWV2 254 aa15.79■□□□□ 0.12
SMARCA4-201ENST00000344626 DDX28Q9NUL7 540 aaKnown RBP15.79■□□□□ 0.12
SMARCA4-201ENST00000344626 TLR4O00206 839 aa15.79■□□□□ 0.12
SMARCA4-201ENST00000344626 CDK9P50750 372 aaKnown RBP15.79■□□□□ 0.12
SMARCA4-201ENST00000344626 ARF5P84085 180 aa15.79■□□□□ 0.12
SMARCA4-201ENST00000344626 RINLQ6ZS11 566 aa15.79■□□□□ 0.12
SMARCA4-201ENST00000344626 ZDHHC21Q8IVQ6 265 aa15.79■□□□□ 0.12
SMARCA4-201ENST00000344626 FAM110BQ8TC76 370 aa15.79■□□□□ 0.12
SMARCA4-201ENST00000344626 CGREF1Q99674 301 aa15.79■□□□□ 0.12
SMARCA4-201ENST00000344626 ELL3Q9HB65 397 aaPredicted RBP15.79■□□□□ 0.12
SMARCA4-201ENST00000344626 SPO11Q9Y5K1 396 aa15.79■□□□□ 0.12
SMARCA4-201ENST00000344626 ZNF726A6NNF4 738 aa15.79■□□□□ 0.12
SMARCA4-201ENST00000344626 YKT6O15498 198 aa15.79■□□□□ 0.12
SMARCA4-201ENST00000344626 NARSO43776 548 aaKnown RBP15.79■□□□□ 0.12
SMARCA4-201ENST00000344626 MYL9P24844 172 aa15.79■□□□□ 0.12
SMARCA4-201ENST00000344626 MSX2P35548 267 aaPredicted RBP15.79■□□□□ 0.12
SMARCA4-201ENST00000344626 CCR2P41597 374 aa15.79■□□□□ 0.12
SMARCA4-201ENST00000344626 AGTR2P50052 363 aa15.79■□□□□ 0.12
SMARCA4-201ENST00000344626 PCLAFQ15004 111 aa15.79■□□□□ 0.12
SMARCA4-201ENST00000344626 TRIM73Q86UV7 250 aa15.79■□□□□ 0.12
SMARCA4-201ENST00000344626 OR52J3Q8NH60 311 aa15.79■□□□□ 0.12
SMARCA4-201ENST00000344626 C1QTNF1Q9BXJ1 281 aa15.79■□□□□ 0.12
SMARCA4-201ENST00000344626 PELI2Q9HAT8 420 aa15.79■□□□□ 0.12
SMARCA4-201ENST00000344626 IKZF2Q9UKS7 526 aa15.79■□□□□ 0.12
SMARCA4-201ENST00000344626 COL5A3P25940 1745 aaPredicted RBP15.79■□□□□ 0.12
SMARCA4-201ENST00000344626 PNMA8CA0A1B0GUJ8 204 aa15.79■□□□□ 0.12
SMARCA4-201ENST00000344626 LOC105378220A0A1B0GUY1 285 aaPredicted RBP15.79■□□□□ 0.12
SMARCA4-201ENST00000344626 C1orf226A1L170 272 aa15.79■□□□□ 0.12
SMARCA4-201ENST00000344626 MED26O95402 600 aa15.79■□□□□ 0.12
SMARCA4-201ENST00000344626 FOXN2P32314 431 aa15.79■□□□□ 0.12
SMARCA4-201ENST00000344626 OR4D2P58180 307 aa15.79■□□□□ 0.12
SMARCA4-201ENST00000344626 TRAF3Q13114 568 aa15.79■□□□□ 0.12
SMARCA4-201ENST00000344626 DUS1LQ6P1R4 473 aaKnown RBP15.79■□□□□ 0.12
SMARCA4-201ENST00000344626 CXXC5Q7LFL8 322 aaKnown RBP15.79■□□□□ 0.12
SMARCA4-201ENST00000344626 OR5AK3PQ8NH89 298 aa15.79■□□□□ 0.12
SMARCA4-201ENST00000344626 SYT11Q9BT88 431 aa15.79■□□□□ 0.12
SMARCA4-201ENST00000344626 BOCQ9BWV1 1114 aa15.79■□□□□ 0.12
SMARCA4-201ENST00000344626 SMURF2Q9HAU4 748 aa15.79■□□□□ 0.12
SMARCA4-201ENST00000344626 SLC39A1Q9NY26 324 aa15.79■□□□□ 0.12
SMARCA4-201ENST00000344626 MAU2Q9Y6X3 613 aa15.79■□□□□ 0.12
SMARCA4-201ENST00000344626 CYP4B1P13584 511 aa15.78■□□□□ 0.12
SMARCA4-201ENST00000344626 MATN1P21941 496 aa15.78■□□□□ 0.12
SMARCA4-201ENST00000344626 ZNF41P51814 821 aaPredicted RBP15.78■□□□□ 0.12
SMARCA4-201ENST00000344626 ZNF765Q7L2R6 523 aa15.78■□□□□ 0.12
SMARCA4-201ENST00000344626 HDHD2Q9H0R4 259 aa15.78■□□□□ 0.12
SMARCA4-201ENST00000344626 S100A14Q9HCY8 104 aa15.78■□□□□ 0.12
SMARCA4-201ENST00000344626 DKKL1Q9UK85 242 aa15.78■□□□□ 0.12
SMARCA4-201ENST00000344626 ZNF823P16415 610 aa15.78■□□□□ 0.12
SMARCA4-201ENST00000344626 NOVA1P51513 510 aaKnown RBP15.78■□□□□ 0.12
SMARCA4-201ENST00000344626 BNIP1Q12981 228 aa15.78■□□□□ 0.12
SMARCA4-201ENST00000344626 NFATC4Q14934 902 aa15.78■□□□□ 0.12
SMARCA4-201ENST00000344626 ZNF630Q2M218 657 aaPredicted RBP15.78■□□□□ 0.12
SMARCA4-201ENST00000344626 OR5L2Q8NGL0 311 aa15.78■□□□□ 0.12
SMARCA4-201ENST00000344626 NR4A3Q92570 626 aa15.78■□□□□ 0.12
SMARCA4-201ENST00000344626 SLC12A9Q9BXP2 914 aa15.78■□□□□ 0.12
SMARCA4-201ENST00000344626 TOR4AQ9NXH8 423 aa15.78■□□□□ 0.12
SMARCA4-201ENST00000344626 RENP00797 406 aa15.78■□□□□ 0.12
SMARCA4-201ENST00000344626 SH3GL3Q99963 347 aa15.78■□□□□ 0.12
SMARCA4-201ENST00000344626 RPP25Q9BUL9 199 aaKnown RBP15.78■□□□□ 0.12
SMARCA4-201ENST00000344626 PNPLA3Q9NST1 481 aa15.78■□□□□ 0.12
SMARCA4-201ENST00000344626 TESMINQ9Y4I5 508 aa15.78■□□□□ 0.12
SMARCA4-201ENST00000344626 COL24A1Q17RW2 1714 aa15.78■□□□□ 0.12
SMARCA4-201ENST00000344626 PRSS38A1L453 326 aa15.78■□□□□ 0.12
SMARCA4-201ENST00000344626 CHST10O43529 356 aa15.78■□□□□ 0.12
SMARCA4-201ENST00000344626 PCDHGA12O60330 932 aa15.78■□□□□ 0.12
SMARCA4-201ENST00000344626 G6PDP11413 515 aa15.78■□□□□ 0.12
SMARCA4-201ENST00000344626 IL1RNP18510 177 aa15.78■□□□□ 0.12
SMARCA4-201ENST00000344626 CDKN2DP55273 166 aa15.78■□□□□ 0.12
SMARCA4-201ENST00000344626 Q6ZS52 159 aa15.78■□□□□ 0.12
SMARCA4-201ENST00000344626 AGBL5Q8NDL9 886 aa15.78■□□□□ 0.12
SMARCA4-201ENST00000344626 LRRC58Q96CX6 371 aa15.78■□□□□ 0.12
SMARCA4-201ENST00000344626 CENPNQ96H22 339 aaPredicted RBP15.78■□□□□ 0.12
SMARCA4-201ENST00000344626 ZNF778Q96MU6 729 aa15.78■□□□□ 0.12
SMARCA4-201ENST00000344626 EBF4Q9BQW3 602 aa15.78■□□□□ 0.12
SMARCA4-201ENST00000344626 DGCR6LQ9BY27 220 aa15.78■□□□□ 0.12
SMARCA4-201ENST00000344626 B3GAT2Q9NPZ5 323 aa15.78■□□□□ 0.12
SMARCA4-201ENST00000344626 ST6GALNAC1Q9NSC7 600 aaPredicted RBP15.78■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms