RNA–Protein interactions for RNA: ENST00000343550.9

USF2-202, Transcript of upstream transcription factor 2, c-fos interacting, humanhuman

TSL 1 (best) BASIC

Gene USF2, Length 1,523 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF2-202ENST00000343550 WDR54Q9H977 334 aa17.08■□□□□ 0.32
USF2-202ENST00000343550 P4HTMQ9NXG6 502 aa17.08■□□□□ 0.32
USF2-202ENST00000343550 VSTM2BA6NLU5 285 aa17.07■□□□□ 0.32
USF2-202ENST00000343550 TCP11X1B4DZS4 312 aa17.07■□□□□ 0.32
USF2-202ENST00000343550 K7EPI3 171 aa17.07■□□□□ 0.32
USF2-202ENST00000343550 IGHEP01854 428 aa17.07■□□□□ 0.32
USF2-202ENST00000343550 SLC35G6P0C7Q6 338 aa17.07■□□□□ 0.32
USF2-202ENST00000343550 GFAPP14136 432 aa17.07■□□□□ 0.32
USF2-202ENST00000343550 SETDB1Q15047 1291 aa17.07■□□□□ 0.32
USF2-202ENST00000343550 LRRC70Q7Z2Q7 622 aa17.07■□□□□ 0.32
USF2-202ENST00000343550 AMER3Q8N944 861 aa17.07■□□□□ 0.32
USF2-202ENST00000343550 TRPV3Q8NET8 790 aa17.07■□□□□ 0.32
USF2-202ENST00000343550 WDR34Q96EX3 536 aa17.07■□□□□ 0.32
USF2-202ENST00000343550 SCYL1Q96KG9 808 aa17.07■□□□□ 0.32
USF2-202ENST00000343550 NT5DC2Q9H857 520 aa17.07■□□□□ 0.32
USF2-202ENST00000343550 MAP10Q9P2G4 905 aa17.07■□□□□ 0.32
USF2-202ENST00000343550 COPG2Q9UBF2 871 aa17.07■□□□□ 0.32
USF2-202ENST00000343550 OPTCQ9UBM4 332 aa17.07■□□□□ 0.32
USF2-202ENST00000343550 CTSFQ9UBX1 484 aa17.07■□□□□ 0.32
USF2-202ENST00000343550 ZNF282Q9UDV7 671 aaPredicted RBP17.07■□□□□ 0.32
USF2-202ENST00000343550 SLC22A7Q9Y694 548 aa17.07■□□□□ 0.32
USF2-202ENST00000343550 RP1L1Q8IWN7 2480 aaPredicted RBP17.07■□□□□ 0.32
USF2-202ENST00000343550 IGLV3-12A0A075B6K2 115 aa17.06■□□□□ 0.32
USF2-202ENST00000343550 NDUFS4O43181 175 aa17.06■□□□□ 0.32
USF2-202ENST00000343550 WFS1O76024 890 aa17.06■□□□□ 0.32
USF2-202ENST00000343550 SERPIND1P05546 499 aa17.06■□□□□ 0.32
USF2-202ENST00000343550 UMODP07911 640 aa17.06■□□□□ 0.32
USF2-202ENST00000343550 FBLP22087 321 aaKnown RBP17.06■□□□□ 0.32
USF2-202ENST00000343550 CASP2P42575 452 aa17.06■□□□□ 0.32
USF2-202ENST00000343550 PCDH1Q08174 1060 aa17.06■□□□□ 0.32
USF2-202ENST00000343550 DSG2Q14126 1118 aa17.06■□□□□ 0.32
USF2-202ENST00000343550 DOC2AQ14183 400 aa17.06■□□□□ 0.32
USF2-202ENST00000343550 SLBPQ14493 270 aaKnown RBP eCLIP17.06■□□□□ 0.32
USF2-202ENST00000343550 MYBPC3Q14896 1274 aa17.06■□□□□ 0.32
USF2-202ENST00000343550 PCBP2Q15366 365 aaKnown RBP eCLIP17.06■□□□□ 0.328e-8■■■■■ 31.5
USF2-202ENST00000343550 PLEKHN1Q494U1 663 aaPredicted RBP17.06■□□□□ 0.32
USF2-202ENST00000343550 XKR6Q5GH73 641 aa17.06■□□□□ 0.32
USF2-202ENST00000343550 TMIGD1Q6UXZ0 262 aa17.06■□□□□ 0.32
USF2-202ENST00000343550 TDRPQ86YL5 185 aa17.06■□□□□ 0.32
USF2-202ENST00000343550 GALNT16Q8N428 558 aa17.06■□□□□ 0.32
USF2-202ENST00000343550 OR9A4Q8NGU2 314 aa17.06■□□□□ 0.32
USF2-202ENST00000343550 NT5CQ8TCD5 201 aa17.06■□□□□ 0.32
USF2-202ENST00000343550 CREB3L4Q8TEY5 395 aa17.06■□□□□ 0.32
USF2-202ENST00000343550 SPSB2Q99619 263 aa17.06■□□□□ 0.32
USF2-202ENST00000343550 MRPL57Q9BQC6 102 aaKnown RBP17.06■□□□□ 0.32
USF2-202ENST00000343550 PITHD1Q9GZP4 211 aaPredicted RBP17.06■□□□□ 0.32
USF2-202ENST00000343550 PPCSQ9HAB8 311 aa17.06■□□□□ 0.32
USF2-202ENST00000343550 CPSF2Q9P2I0 782 aaKnown RBP17.06■□□□□ 0.32
USF2-202ENST00000343550 ZNF490Q9ULM2 529 aaPredicted RBP17.06■□□□□ 0.32
USF2-202ENST00000343550 A0A1W2PPM1 405 aa17.06■□□□□ 0.32
USF2-202ENST00000343550 LRRC14BA6NHZ5 514 aa17.06■□□□□ 0.32
USF2-202ENST00000343550 H0YIG0 161 aa17.06■□□□□ 0.32
USF2-202ENST00000343550 PRPF4O43172 522 aaKnown RBP eCLIP17.06■□□□□ 0.322e-6■□□□□ 9.3
USF2-202ENST00000343550 SEMA7AO75326 666 aa17.06■□□□□ 0.32
USF2-202ENST00000343550 NSA2O95478 260 aaKnown RBP17.06■□□□□ 0.32
USF2-202ENST00000343550 ALPPP05187 535 aa17.06■□□□□ 0.32
USF2-202ENST00000343550 SBK3P0C264 359 aa17.06■□□□□ 0.32
USF2-202ENST00000343550 CD22P20273 847 aa17.06■□□□□ 0.32
USF2-202ENST00000343550 SLCO1A2P46721 670 aa17.06■□□□□ 0.32
USF2-202ENST00000343550 AVPR1BP47901 424 aa17.06■□□□□ 0.32
USF2-202ENST00000343550 OCA2Q04671 838 aa17.06■□□□□ 0.32
USF2-202ENST00000343550 HYAL2Q12891 473 aa17.06■□□□□ 0.32
USF2-202ENST00000343550 CHIT1Q13231 466 aa17.06■□□□□ 0.32
USF2-202ENST00000343550 E2F2Q14209 437 aa17.06■□□□□ 0.32
USF2-202ENST00000343550 NAA30Q147X3 362 aaPredicted RBP17.06■□□□□ 0.32
USF2-202ENST00000343550 RASA2Q15283 850 aa17.06■□□□□ 0.32
USF2-202ENST00000343550 TBCCQ15814 346 aa17.06■□□□□ 0.32
USF2-202ENST00000343550 C4orf17Q53FE4 359 aa17.06■□□□□ 0.32
USF2-202ENST00000343550 VWA2Q5GFL6 755 aa17.06■□□□□ 0.32
USF2-202ENST00000343550 EMBQ6PCB8 327 aa17.06■□□□□ 0.32
USF2-202ENST00000343550 PRSS41Q7RTY9 318 aa17.06■□□□□ 0.32
USF2-202ENST00000343550 PPP1R32Q7Z5V6 425 aa17.06■□□□□ 0.32
USF2-202ENST00000343550 CYP4X1Q8N118 509 aa17.06■□□□□ 0.32
USF2-202ENST00000343550 KRT78Q8N1N4 520 aa17.06■□□□□ 0.32
USF2-202ENST00000343550 STT3BQ8TCJ2 826 aa17.06■□□□□ 0.32
USF2-202ENST00000343550 ACMSDQ8TDX5 336 aa17.06■□□□□ 0.32
USF2-202ENST00000343550 PTCD3Q96EY7 689 aaKnown RBP17.06■□□□□ 0.32
USF2-202ENST00000343550 XPR1Q9UBH6 696 aa17.06■□□□□ 0.32
USF2-202ENST00000343550 TRPC4Q9UBN4 977 aa17.06■□□□□ 0.32
USF2-202ENST00000343550 NXT1Q9UKK6 140 aaKnown RBP17.06■□□□□ 0.32
USF2-202ENST00000343550 B3GNT3Q9Y2A9 372 aa17.06■□□□□ 0.32
USF2-202ENST00000343550 TNPO3Q9Y5L0 923 aaKnown RBP17.06■□□□□ 0.32
USF2-202ENST00000343550 FOXO6A8MYZ6 492 aa17.05■□□□□ 0.32
USF2-202ENST00000343550 GOLGA8RI6L899 631 aa17.05■□□□□ 0.32
USF2-202ENST00000343550 KLHL41O60662 606 aa17.05■□□□□ 0.32
USF2-202ENST00000343550 SERPINA6P08185 405 aa17.05■□□□□ 0.32
USF2-202ENST00000343550 ZGLP1P0C6A0 271 aa17.05■□□□□ 0.32
USF2-202ENST00000343550 PYGBP11216 843 aa17.05■□□□□ 0.32
USF2-202ENST00000343550 EPB42P16452 691 aa17.05■□□□□ 0.32
USF2-202ENST00000343550 IL1RNP18510 177 aa17.05■□□□□ 0.32
USF2-202ENST00000343550 IRF8Q02556 426 aa17.05■□□□□ 0.32
USF2-202ENST00000343550 RGS1Q08116 209 aa17.05■□□□□ 0.32
USF2-202ENST00000343550 MRPL49Q13405 166 aaKnown RBP17.05■□□□□ 0.32
USF2-202ENST00000343550 SYT16Q17RD7 645 aa17.05■□□□□ 0.32
USF2-202ENST00000343550 EIF2S3LQ2VIR3 472 aaKnown RBP17.05■□□□□ 0.32
USF2-202ENST00000343550 IGFL3Q6UXB1 125 aa17.05■□□□□ 0.32
USF2-202ENST00000343550 SHISA6Q6ZSJ9 500 aa17.05■□□□□ 0.32
USF2-202ENST00000343550 SH2D5Q6ZV89 423 aa17.05■□□□□ 0.32
USF2-202ENST00000343550 LAPTM4BQ86VI4 370 aa17.05■□□□□ 0.32
USF2-202ENST00000343550 LCA5Q86VQ0 697 aa17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms