RNA–Protein interactions for RNA: ENST00000343524.9

ATG4A-201, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 2

Gene ATG4A, Length 1,941 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-201ENST00000343524 TAAR1Q96RJ0 339 aa7.85□□□□□ -1.15
ATG4A-201ENST00000343524 ATOH8Q96SQ7 321 aa7.85□□□□□ -1.15
ATG4A-201ENST00000343524 ZNF382Q96SR6 550 aa7.85□□□□□ -1.15
ATG4A-201ENST00000343524 FICDQ9BVA6 458 aa7.85□□□□□ -1.15
ATG4A-201ENST00000343524 BARHL1Q9BZE3 327 aa7.85□□□□□ -1.15
ATG4A-201ENST00000343524 MFSD1Q9H3U5 465 aa7.85□□□□□ -1.15
ATG4A-201ENST00000343524 SAV1Q9H4B6 383 aaPredicted RBP7.85□□□□□ -1.15
ATG4A-201ENST00000343524 ABCB9Q9NP78 766 aa7.85□□□□□ -1.15
ATG4A-201ENST00000343524 MYOZ2Q9NPC6 264 aa7.85□□□□□ -1.15
ATG4A-201ENST00000343524 SNTG1Q9NSN8 517 aa7.85□□□□□ -1.15
ATG4A-201ENST00000343524 NRBP2Q9NSY0 501 aa7.85□□□□□ -1.15
ATG4A-201ENST00000343524 NDUFB11Q9NX14 153 aa7.85□□□□□ -1.15
ATG4A-201ENST00000343524 VNN3Q9NY84 501 aa7.85□□□□□ -1.15
ATG4A-201ENST00000343524 ACTR10Q9NZ32 417 aa7.85□□□□□ -1.15
ATG4A-201ENST00000343524 NDRG3Q9UGV2 375 aa7.85□□□□□ -1.15
ATG4A-201ENST00000343524 OGDHLQ9ULD0 1010 aa7.85□□□□□ -1.15
ATG4A-201ENST00000343524 RNF112Q9ULX5 631 aa7.85□□□□□ -1.15
ATG4A-201ENST00000343524 MAFFQ9ULX9 164 aa7.85□□□□□ -1.15
ATG4A-201ENST00000343524 DUSP12Q9UNI6 340 aa7.85□□□□□ -1.15
ATG4A-201ENST00000343524 FCF1Q9Y324 198 aaKnown RBP7.85□□□□□ -1.15
ATG4A-201ENST00000343524 NEUROG3Q9Y4Z2 214 aa7.85□□□□□ -1.15
ATG4A-201ENST00000343524 MYO18AQ92614 2054 aaKnown RBP7.85□□□□□ -1.15
ATG4A-201ENST00000343524 SMCHD1A6NHR9 2005 aa7.84□□□□□ -1.15
ATG4A-201ENST00000343524 CARNS1A5YM72 827 aa7.84□□□□□ -1.15
ATG4A-201ENST00000343524 ASB14A6NK59 587 aa7.84□□□□□ -1.15
ATG4A-201ENST00000343524 GATCO43716 136 aaKnown RBP7.84□□□□□ -1.15
ATG4A-201ENST00000343524 GPX5O75715 221 aa7.84□□□□□ -1.15
ATG4A-201ENST00000343524 FAM157BP0CG42 384 aa7.84□□□□□ -1.15
ATG4A-201ENST00000343524 ANXA8P13928 327 aa7.84□□□□□ -1.15
ATG4A-201ENST00000343524 PTPRAP18433 802 aa7.84□□□□□ -1.15
ATG4A-201ENST00000343524 GCGRP47871 477 aa7.84□□□□□ -1.15
ATG4A-201ENST00000343524 EPHA5P54756 1037 aa7.84□□□□□ -1.15
ATG4A-201ENST00000343524 FOXC1Q12948 553 aa7.84□□□□□ -1.15
ATG4A-201ENST00000343524 PPP1R8Q12972 351 aaKnown RBP7.84□□□□□ -1.15
ATG4A-201ENST00000343524 ZMYND11Q15326 602 aa7.84□□□□□ -1.15
ATG4A-201ENST00000343524 RBBP7Q16576 425 aa7.84□□□□□ -1.15
ATG4A-201ENST00000343524 FAM187BQ17R55 369 aa7.84□□□□□ -1.15
ATG4A-201ENST00000343524 EML3Q32P44 896 aa7.84□□□□□ -1.15
ATG4A-201ENST00000343524 PPP1R26Q5T8A7 1209 aaPredicted RBP7.84□□□□□ -1.15
ATG4A-201ENST00000343524 TRILQ7L0X0 811 aa7.84□□□□□ -1.15
ATG4A-201ENST00000343524 BMP8AQ7Z5Y6 402 aa7.84□□□□□ -1.15
ATG4A-201ENST00000343524 NLRP8Q86W28 1048 aa7.84□□□□□ -1.15
ATG4A-201ENST00000343524 C7orf61Q8IZ16 206 aa7.84□□□□□ -1.15
ATG4A-201ENST00000343524 C12orf29Q8N999 325 aa7.84□□□□□ -1.15
ATG4A-201ENST00000343524 IPMKQ8NFU5 416 aa7.84□□□□□ -1.15
ATG4A-201ENST00000343524 OR4A15Q8NGL6 344 aa7.84□□□□□ -1.15
ATG4A-201ENST00000343524 CLHC1Q8NHS4 586 aa7.84□□□□□ -1.15
ATG4A-201ENST00000343524 ATOH1Q92858 354 aaPredicted RBP7.84□□□□□ -1.15
ATG4A-201ENST00000343524 KIAA1191Q96A73 305 aa7.84□□□□□ -1.15
ATG4A-201ENST00000343524 PABPC5Q96DU9 382 aaKnown RBP7.84□□□□□ -1.15
ATG4A-201ENST00000343524 SIPA1Q96FS4 1042 aa7.84□□□□□ -1.15
ATG4A-201ENST00000343524 OTUB1Q96FW1 271 aaPredicted RBP7.84□□□□□ -1.15
ATG4A-201ENST00000343524 ARL5BQ96KC2 179 aa7.84□□□□□ -1.15
ATG4A-201ENST00000343524 OR2M2Q96R28 347 aa7.84□□□□□ -1.15
ATG4A-201ENST00000343524 FAM129BQ96TA1 746 aa7.84□□□□□ -1.15
ATG4A-201ENST00000343524 TTPALQ9BTX7 342 aa7.84□□□□□ -1.15
ATG4A-201ENST00000343524 DPCDQ9BVM2 203 aaPredicted RBP7.84□□□□□ -1.15
ATG4A-201ENST00000343524 MND1Q9BWT6 205 aa7.84□□□□□ -1.15
ATG4A-201ENST00000343524 CD244Q9BZW8 370 aa7.84□□□□□ -1.15
ATG4A-201ENST00000343524 ZFP64Q9NPA5 681 aa7.84□□□□□ -1.15
ATG4A-201ENST00000343524 SEMA4BQ9NPR2 832 aaPredicted RBP7.84□□□□□ -1.15
ATG4A-201ENST00000343524 GPR83Q9NYM4 423 aa7.84□□□□□ -1.15
ATG4A-201ENST00000343524 NLKQ9UBE8 527 aa7.84□□□□□ -1.15
ATG4A-201ENST00000343524 AASSQ9UDR5 926 aa7.84□□□□□ -1.15
ATG4A-201ENST00000343524 POLLQ9UGP5 575 aa7.84□□□□□ -1.15
ATG4A-201ENST00000343524 UTS2RQ9UKP6 389 aa7.84□□□□□ -1.15
ATG4A-201ENST00000343524 TMCC3Q9ULS5 477 aa7.84□□□□□ -1.15
ATG4A-201ENST00000343524 TMEM5Q9Y2B1 443 aa7.84□□□□□ -1.15
ATG4A-201ENST00000343524 KCNK7Q9Y2U2 307 aa7.84□□□□□ -1.15
ATG4A-201ENST00000343524 MAFBQ9Y5Q3 323 aaPredicted RBP7.84□□□□□ -1.15
ATG4A-201ENST00000343524 A0A1W2PQL4 384 aaPredicted RBP7.84□□□□□ -1.16
ATG4A-201ENST00000343524 MPTX1A8MV57 137 aa7.84□□□□□ -1.16
ATG4A-201ENST00000343524 SMLR1H3BR10 107 aa7.84□□□□□ -1.16
ATG4A-201ENST00000343524 ADAMDEC1O15204 470 aa7.84□□□□□ -1.16
ATG4A-201ENST00000343524 SIX3O95343 332 aaPredicted RBP7.84□□□□□ -1.16
ATG4A-201ENST00000343524 ZNF682O95780 498 aa7.84□□□□□ -1.16
ATG4A-201ENST00000343524 TP53P04637 393 aaPredicted RBP7.84□□□□□ -1.16
ATG4A-201ENST00000343524 IFNA4P05014 189 aa7.84□□□□□ -1.16
ATG4A-201ENST00000343524 NFICP08651 508 aa7.84□□□□□ -1.16
ATG4A-201ENST00000343524 SRCP12931 536 aa7.84□□□□□ -1.16
ATG4A-201ENST00000343524 PEPDP12955 493 aa7.84□□□□□ -1.16
ATG4A-201ENST00000343524 GRK4P32298 578 aa7.84□□□□□ -1.16
ATG4A-201ENST00000343524 RORAP35398 523 aa7.84□□□□□ -1.16
ATG4A-201ENST00000343524 ERVFC1P60507 584 aa7.84□□□□□ -1.16
ATG4A-201ENST00000343524 NR6A1Q15406 480 aa7.84□□□□□ -1.16
ATG4A-201ENST00000343524 SOWAHAQ2M3V2 549 aa7.84□□□□□ -1.16
ATG4A-201ENST00000343524 ZNF800Q2TB10 664 aaPredicted RBP eCLIP7.84□□□□□ -1.16
ATG4A-201ENST00000343524 FLYWCH1Q4VC44 716 aa7.84□□□□□ -1.16
ATG4A-201ENST00000343524 FAM209BQ5JX69 171 aa7.84□□□□□ -1.16
ATG4A-201ENST00000343524 RNLSQ5VYX0 342 aa7.84□□□□□ -1.16
ATG4A-201ENST00000343524 DCAF15Q66K64 600 aa7.84□□□□□ -1.16
ATG4A-201ENST00000343524 PLAG1Q6DJT9 500 aa7.84□□□□□ -1.16
ATG4A-201ENST00000343524 MZT2AQ6P582 158 aa7.84□□□□□ -1.16
ATG4A-201ENST00000343524 DBX2Q6ZNG2 339 aa7.84□□□□□ -1.16
ATG4A-201ENST00000343524 CATSPERGQ6ZRH7 1159 aa7.84□□□□□ -1.16
ATG4A-201ENST00000343524 RNF165Q6ZSG1 346 aa7.84□□□□□ -1.16
ATG4A-201ENST00000343524 RASSF6Q6ZTQ3 369 aa7.84□□□□□ -1.16
ATG4A-201ENST00000343524 HSD17B13Q7Z5P4 300 aaPredicted RBP7.84□□□□□ -1.16
ATG4A-201ENST00000343524 VSIG10LQ86VR7 867 aa7.84□□□□□ -1.16
ATG4A-201ENST00000343524 CRIPAKQ8N1N5 446 aa7.84□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms