RNA–Protein interactions for RNA: ENST00000343060.4

HOXA1-201, Transcript of homeobox A1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXA1, Length 2,517 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA1-201ENST00000343060 TDRD15B5MCY1 1934 aaKnown RBP9.3□□□□□ -0.92
HOXA1-201ENST00000343060 OR5K3A6NET4 321 aa9.3□□□□□ -0.92
HOXA1-201ENST00000343060 LEUTXA8MZ59 168 aa9.3□□□□□ -0.92
HOXA1-201ENST00000343060 M0R129 80 aa9.3□□□□□ -0.92
HOXA1-201ENST00000343060 GAPDHSO14556 408 aaPredicted RBP9.3□□□□□ -0.92
HOXA1-201ENST00000343060 KDELR3O43731 214 aa9.3□□□□□ -0.92
HOXA1-201ENST00000343060 TPST2O60704 377 aa9.3□□□□□ -0.92
HOXA1-201ENST00000343060 TMCC2O75069 709 aa9.3□□□□□ -0.92
HOXA1-201ENST00000343060 LRATO95237 230 aa9.3□□□□□ -0.92
HOXA1-201ENST00000343060 CYP17A1P05093 508 aa9.3□□□□□ -0.92
HOXA1-201ENST00000343060 CCNYL3P0C7X3 344 aa9.3□□□□□ -0.92
HOXA1-201ENST00000343060 ZNF7P17097 686 aaPredicted RBP9.3□□□□□ -0.92
HOXA1-201ENST00000343060 CSTF2P33240 577 aaKnown RBP eCLIP9.3□□□□□ -0.92
HOXA1-201ENST00000343060 HMGA2P52926 109 aa9.3□□□□□ -0.92
HOXA1-201ENST00000343060 HOXC5Q00444 222 aa9.3□□□□□ -0.92
HOXA1-201ENST00000343060 HSPA14Q0VDF9 509 aa9.3□□□□□ -0.92
HOXA1-201ENST00000343060 DMC1Q14565 340 aa9.3□□□□□ -0.92
HOXA1-201ENST00000343060 DSC3Q14574 896 aa9.3□□□□□ -0.92
HOXA1-201ENST00000343060 TEAD4Q15561 434 aa9.3□□□□□ -0.92
HOXA1-201ENST00000343060 CPSF6Q16630 551 aaKnown RBP eCLIP9.3□□□□□ -0.92
HOXA1-201ENST00000343060 EXOC3L2Q2M3D2 409 aa9.3□□□□□ -0.92
HOXA1-201ENST00000343060 ZNF800Q2TB10 664 aaPredicted RBP eCLIP9.3□□□□□ -0.92
HOXA1-201ENST00000343060 NOXRED1Q6NXP6 359 aa9.3□□□□□ -0.92
HOXA1-201ENST00000343060 FAM131AQ6UXB0 335 aa9.3□□□□□ -0.92
HOXA1-201ENST00000343060 ZNF621Q6ZSS3 439 aa9.3□□□□□ -0.92
HOXA1-201ENST00000343060 SLC51BQ86UW2 128 aa9.3□□□□□ -0.92
HOXA1-201ENST00000343060 SCN4BQ8IWT1 228 aa9.3□□□□□ -0.92
HOXA1-201ENST00000343060 ZBTB2Q8N680 514 aa9.3□□□□□ -0.92
HOXA1-201ENST00000343060 NATD1Q8N6N6 113 aa9.3□□□□□ -0.92
HOXA1-201ENST00000343060 KLHDC9Q8NEP7 349 aa9.3□□□□□ -0.92
HOXA1-201ENST00000343060 GPRC5AQ8NFJ5 357 aa9.3□□□□□ -0.92
HOXA1-201ENST00000343060 NLGN4YQ8NFZ3 816 aaPredicted RBP9.3□□□□□ -0.92
HOXA1-201ENST00000343060 OR7D4Q8NG98 312 aa9.3□□□□□ -0.92
HOXA1-201ENST00000343060 VANGL1Q8TAA9 524 aaPredicted RBP9.3□□□□□ -0.92
HOXA1-201ENST00000343060 CREB3L4Q8TEY5 395 aa9.3□□□□□ -0.92
HOXA1-201ENST00000343060 MTFMTQ96DP5 389 aaKnown RBP9.3□□□□□ -0.92
HOXA1-201ENST00000343060 CITED4Q96RK1 184 aa9.3□□□□□ -0.92
HOXA1-201ENST00000343060 BEX2Q9BXY8 128 aa9.3□□□□□ -0.92
HOXA1-201ENST00000343060 CLN6Q9NWW5 311 aa9.3□□□□□ -0.92
HOXA1-201ENST00000343060 MARCH2Q9P0N8 246 aa9.3□□□□□ -0.92
HOXA1-201ENST00000343060 NDOR1Q9UHB4 597 aa9.3□□□□□ -0.92
HOXA1-201ENST00000343060 BTNL2Q9UIR0 455 aa9.3□□□□□ -0.92
HOXA1-201ENST00000343060 HCN1O60741 890 aa9.3□□□□□ -0.92
HOXA1-201ENST00000343060 CSO75390 466 aaKnown RBP9.3□□□□□ -0.92
HOXA1-201ENST00000343060 PDE9AO76083 593 aa9.3□□□□□ -0.92
HOXA1-201ENST00000343060 HMBSP08397 361 aa9.3□□□□□ -0.92
HOXA1-201ENST00000343060 NUDT7P0C024 238 aa9.3□□□□□ -0.92
HOXA1-201ENST00000343060 CYP2A6P11509 494 aaPredicted RBP9.3□□□□□ -0.92
HOXA1-201ENST00000343060 POLR2CP19387 275 aaPredicted RBP9.3□□□□□ -0.92
HOXA1-201ENST00000343060 PSMA1P25786 263 aaKnown RBP9.3□□□□□ -0.92
HOXA1-201ENST00000343060 SPIBQ01892 262 aa9.3□□□□□ -0.92
HOXA1-201ENST00000343060 VEPH1Q14D04 833 aa9.3□□□□□ -0.92
HOXA1-201ENST00000343060 TATDN3Q17R31 274 aa9.3□□□□□ -0.92
HOXA1-201ENST00000343060 IFI44LQ53G44 452 aa9.3□□□□□ -0.92
HOXA1-201ENST00000343060 RGMBQ6NW40 437 aa9.3□□□□□ -0.92
HOXA1-201ENST00000343060 HSDL2Q6YN16 418 aa9.3□□□□□ -0.92
HOXA1-201ENST00000343060 GLRX5Q86SX6 157 aa9.3□□□□□ -0.92
HOXA1-201ENST00000343060 RBFAQ8N0V3 343 aa9.3□□□□□ -0.92
HOXA1-201ENST00000343060 DUSP18Q8NEJ0 188 aa9.3□□□□□ -0.92
HOXA1-201ENST00000343060 FUBP3Q96I24 572 aaKnown RBP eCLIP9.3□□□□□ -0.92
HOXA1-201ENST00000343060 APOLD1Q96LR9 279 aa9.3□□□□□ -0.92
HOXA1-201ENST00000343060 C19orf43Q9BQ61 176 aa9.3□□□□□ -0.92
HOXA1-201ENST00000343060 HTATIP2Q9BUP3 242 aa9.3□□□□□ -0.92
HOXA1-201ENST00000343060 ABCB9Q9NP78 766 aa9.3□□□□□ -0.92
HOXA1-201ENST00000343060 EXOSC4Q9NPD3 245 aaKnown RBP9.3□□□□□ -0.92
HOXA1-201ENST00000343060 LATS2Q9NRM7 1088 aa9.3□□□□□ -0.92
HOXA1-201ENST00000343060 SNTG1Q9NSN8 517 aa9.3□□□□□ -0.92
HOXA1-201ENST00000343060 EIF3KQ9UBQ5 218 aaKnown RBP9.3□□□□□ -0.92
HOXA1-201ENST00000343060 NUP50Q9UKX7 468 aa9.3□□□□□ -0.92
HOXA1-201ENST00000343060 TMPRSS11EQ9UL52 423 aa9.3□□□□□ -0.92
HOXA1-201ENST00000343060 ST3GAL5Q9UNP4 418 aa9.3□□□□□ -0.92
HOXA1-201ENST00000343060 DSPPQ9NZW4 1301 aa9.3□□□□□ -0.92
HOXA1-201ENST00000343060 TRBV5-4A0A0C4DH59 114 aa9.29□□□□□ -0.92
HOXA1-201ENST00000343060 C17orf102A2RUQ5 167 aa9.29□□□□□ -0.92
HOXA1-201ENST00000343060 PRAMEF25A6NGN4 478 aa9.29□□□□□ -0.92
HOXA1-201ENST00000343060 H3BNC9 293 aa9.29□□□□□ -0.92
HOXA1-201ENST00000343060 PITPNM1O00562 1244 aa9.29□□□□□ -0.92
HOXA1-201ENST00000343060 YY2O15391 372 aa9.29□□□□□ -0.92
HOXA1-201ENST00000343060 NOS1APO75052 506 aaPredicted RBP9.29□□□□□ -0.92
HOXA1-201ENST00000343060 TBX18O95935 607 aa9.29□□□□□ -0.92
HOXA1-201ENST00000343060 SLC10A3P09131 477 aa9.29□□□□□ -0.92
HOXA1-201ENST00000343060 C1SP09871 688 aa9.29□□□□□ -0.92
HOXA1-201ENST00000343060 HLA-EP13747 358 aa9.29□□□□□ -0.92
HOXA1-201ENST00000343060 SOX3P41225 446 aa9.29□□□□□ -0.92
HOXA1-201ENST00000343060 MAP2K3P46734 347 aa9.29□□□□□ -0.92
HOXA1-201ENST00000343060 SNRPGP62308 76 aaKnown RBP9.29□□□□□ -0.92
HOXA1-201ENST00000343060 FAM189BP81408 668 aa9.29□□□□□ -0.92
HOXA1-201ENST00000343060 MLLT11Q13015 90 aaPredicted RBP9.29□□□□□ -0.92
HOXA1-201ENST00000343060 PTGES3Q15185 160 aaKnown RBP9.29□□□□□ -0.92
HOXA1-201ENST00000343060 RGNQ15493 299 aa9.29□□□□□ -0.92
HOXA1-201ENST00000343060 BTBD16Q32M84 506 aa9.29□□□□□ -0.92
HOXA1-201ENST00000343060 MACC1Q6ZN28 852 aa9.29□□□□□ -0.92
HOXA1-201ENST00000343060 MBOAT1Q6ZNC8 495 aa9.29□□□□□ -0.92
HOXA1-201ENST00000343060 CAMKMTQ7Z624 323 aa9.29□□□□□ -0.92
HOXA1-201ENST00000343060 SERPINA9Q86WD7 417 aa9.29□□□□□ -0.92
HOXA1-201ENST00000343060 CLECL1Q8IZS7 167 aa9.29□□□□□ -0.92
HOXA1-201ENST00000343060 IL17RCQ8NAC3 791 aa9.29□□□□□ -0.92
HOXA1-201ENST00000343060 C11orf65Q8NCR3 313 aa9.29□□□□□ -0.92
HOXA1-201ENST00000343060 OR9Q2Q8NGE9 314 aa9.29□□□□□ -0.92
HOXA1-201ENST00000343060 ENKURQ8TC29 256 aa9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms