RNA–Protein interactions for RNA: ENST00000342988.7

SMAD4-201, Transcript of SMAD family member 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMAD4, Length 8,769 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-201ENST00000342988 NPBWR1P48145 328 aa17.12■□□□□ 0.33
SMAD4-201ENST00000342988 OAZ1P54368 228 aa17.12■□□□□ 0.33
SMAD4-201ENST00000342988 LASP1Q14847 261 aaKnown RBP17.12■□□□□ 0.33
SMAD4-201ENST00000342988 MPPED2Q15777 294 aa17.12■□□□□ 0.33
SMAD4-201ENST00000342988 MBOAT1Q6ZNC8 495 aa17.12■□□□□ 0.33
SMAD4-201ENST00000342988 SPATA6LQ8N4H0 392 aa17.12■□□□□ 0.33
SMAD4-201ENST00000342988 OR4K3Q96R72 315 aa17.12■□□□□ 0.33
SMAD4-201ENST00000342988 SPATC1LQ9H0A9 340 aa17.12■□□□□ 0.33
SMAD4-201ENST00000342988 MANSC4A6NHS7 340 aaPredicted RBP17.12■□□□□ 0.33
SMAD4-201ENST00000342988 GANABQ14697 944 aaKnown RBP17.12■□□□□ 0.33
SMAD4-201ENST00000342988 TRMT10AQ8TBZ6 339 aaKnown RBP17.12■□□□□ 0.33
SMAD4-201ENST00000342988 ART4Q93070 314 aa17.12■□□□□ 0.33
SMAD4-201ENST00000342988 RPS10P5Q9NQ39 176 aa17.12■□□□□ 0.33
SMAD4-201ENST00000342988 ZNF891A8MT65 544 aaPredicted RBP17.12■□□□□ 0.33
SMAD4-201ENST00000342988 CDC7O00311 574 aa17.12■□□□□ 0.33
SMAD4-201ENST00000342988 CDRT1O95170 752 aa17.12■□□□□ 0.33
SMAD4-201ENST00000342988 C1RP00736 705 aa17.12■□□□□ 0.33
SMAD4-201ENST00000342988 MAGEB1P43366 347 aa17.12■□□□□ 0.33
SMAD4-201ENST00000342988 GRB10Q13322 594 aa17.12■□□□□ 0.33
SMAD4-201ENST00000342988 RSU1Q15404 277 aa17.12■□□□□ 0.33
SMAD4-201ENST00000342988 PCK2Q16822 640 aa17.12■□□□□ 0.33
SMAD4-201ENST00000342988 TMEM41BQ5BJD5 291 aa17.12■□□□□ 0.33
SMAD4-201ENST00000342988 RAB39BQ96DA2 213 aa17.12■□□□□ 0.33
SMAD4-201ENST00000342988 SCRN2Q96FV2 425 aa17.12■□□□□ 0.33
SMAD4-201ENST00000342988 RBP7Q96R05 134 aa17.12■□□□□ 0.33
SMAD4-201ENST00000342988 ARL6Q9H0F7 186 aa17.12■□□□□ 0.33
SMAD4-201ENST00000342988 SERTAD4Q9NUC0 356 aa17.12■□□□□ 0.33
SMAD4-201ENST00000342988 EXOSC1Q9Y3B2 195 aaKnown RBP17.12■□□□□ 0.33
SMAD4-201ENST00000342988 DBPQ10586 325 aaPredicted RBP17.12■□□□□ 0.33
SMAD4-201ENST00000342988 ARHGAP11AQ6P4F7 1023 aa17.12■□□□□ 0.33
SMAD4-201ENST00000342988 KCTD18Q6PI47 426 aaPredicted RBP17.12■□□□□ 0.33
SMAD4-201ENST00000342988 TMEM205Q6UW68 189 aa17.12■□□□□ 0.33
SMAD4-201ENST00000342988 MARVELD2Q8N4S9 558 aa17.12■□□□□ 0.33
SMAD4-201ENST00000342988 PACRGLQ8N7B6 248 aa17.12■□□□□ 0.33
SMAD4-201ENST00000342988 SHC3Q92529 594 aa17.12■□□□□ 0.33
SMAD4-201ENST00000342988 PLA2G12BQ9BX93 195 aa17.12■□□□□ 0.33
SMAD4-201ENST00000342988 SLCO1B3Q9NPD5 702 aa17.12■□□□□ 0.33
SMAD4-201ENST00000342988 HAO2Q9NYQ3 351 aa17.12■□□□□ 0.33
SMAD4-201ENST00000342988 PRKACAP17612 351 aa17.12■□□□□ 0.33
SMAD4-201ENST00000342988 NUSAP1Q9BXS6 441 aaKnown RBP17.12■□□□□ 0.33
SMAD4-201ENST00000342988 SEMA6BQ9H3T3 888 aa17.12■□□□□ 0.33
SMAD4-201ENST00000342988 TMEM9Q9P0T7 183 aa17.12■□□□□ 0.33
SMAD4-201ENST00000342988 A0A0A6YYH2 397 aa17.12■□□□□ 0.33
SMAD4-201ENST00000342988 A6NJ64 397 aa17.12■□□□□ 0.33
SMAD4-201ENST00000342988 KCNU1A8MYU2 1149 aa17.12■□□□□ 0.33
SMAD4-201ENST00000342988 H2AFB2P0C5Z0 115 aa17.12■□□□□ 0.33
SMAD4-201ENST00000342988 TPSB2P20231 275 aa17.12■□□□□ 0.33
SMAD4-201ENST00000342988 RAB7AP51149 207 aa17.12■□□□□ 0.33
SMAD4-201ENST00000342988 TPSAB1Q15661 275 aa17.12■□□□□ 0.33
SMAD4-201ENST00000342988 CHRNA6Q15825 494 aa17.12■□□□□ 0.33
SMAD4-201ENST00000342988 RHBDF2Q6PJF5 856 aa17.12■□□□□ 0.33
SMAD4-201ENST00000342988 SLC9A9Q8IVB4 645 aa17.12■□□□□ 0.33
SMAD4-201ENST00000342988 OR2AP1Q8NGE2 309 aa17.12■□□□□ 0.33
SMAD4-201ENST00000342988 TSPAN10Q9H1Z9 355 aaPredicted RBP17.12■□□□□ 0.33
SMAD4-201ENST00000342988 DEC1Q9P2X7 70 aa17.12■□□□□ 0.33
SMAD4-201ENST00000342988 PCDHGA7Q9Y5G6 932 aa17.12■□□□□ 0.33
SMAD4-201ENST00000342988 PBX3P40426 434 aa17.11■□□□□ 0.33
SMAD4-201ENST00000342988 CLCQ05315 142 aa17.11■□□□□ 0.33
SMAD4-201ENST00000342988 KLHDC10Q6PID8 442 aa17.11■□□□□ 0.33
SMAD4-201ENST00000342988 TRABD2AQ86V40 505 aa17.11■□□□□ 0.33
SMAD4-201ENST00000342988 MON1AQ86VX9 555 aa17.11■□□□□ 0.33
SMAD4-201ENST00000342988 GAB3Q8WWW8 586 aa17.11■□□□□ 0.33
SMAD4-201ENST00000342988 NTAN1Q96AB6 310 aa17.11■□□□□ 0.33
SMAD4-201ENST00000342988 PAPOLGQ9BWT3 736 aaKnown RBP17.11■□□□□ 0.33
SMAD4-201ENST00000342988 EPHA6Q9UF33 1036 aa17.11■□□□□ 0.33
SMAD4-201ENST00000342988 TLL1O43897 1013 aa17.11■□□□□ 0.33
SMAD4-201ENST00000342988 SHBGP04278 402 aa17.11■□□□□ 0.33
SMAD4-201ENST00000342988 GET4Q7L5D6 327 aaPredicted RBP17.11■□□□□ 0.33
SMAD4-201ENST00000342988 TRIM46Q7Z4K8 759 aa17.11■□□□□ 0.33
SMAD4-201ENST00000342988 SUMF2Q8NBJ7 301 aa17.11■□□□□ 0.33
SMAD4-201ENST00000342988 FAM122AQ96E09 287 aa17.11■□□□□ 0.33
SMAD4-201ENST00000342988 MAN2C1Q9NTJ4 1040 aa17.11■□□□□ 0.33
SMAD4-201ENST00000342988 CDK14O94921 469 aa17.11■□□□□ 0.33
SMAD4-201ENST00000342988 PIGRP01833 764 aa17.11■□□□□ 0.33
SMAD4-201ENST00000342988 PRPS1L1P21108 318 aa17.11■□□□□ 0.33
SMAD4-201ENST00000342988 TNFSF4P23510 183 aa17.11■□□□□ 0.33
SMAD4-201ENST00000342988 HNF1BP35680 557 aa17.11■□□□□ 0.33
SMAD4-201ENST00000342988 ABCG1P45844 678 aa17.11■□□□□ 0.33
SMAD4-201ENST00000342988 MON1BQ7L1V2 547 aa17.11■□□□□ 0.33
SMAD4-201ENST00000342988 AMZ2Q86W34 360 aa17.11■□□□□ 0.33
SMAD4-201ENST00000342988 OR5B17Q8NGF7 314 aa17.11■□□□□ 0.33
SMAD4-201ENST00000342988 NSMAFQ92636 917 aa17.11■□□□□ 0.33
SMAD4-201ENST00000342988 LRRC42Q9Y546 428 aa17.11■□□□□ 0.33
SMAD4-201ENST00000342988 GJE1A6NN92 205 aa17.11■□□□□ 0.33
SMAD4-201ENST00000342988 SCAMP1O15126 338 aa17.11■□□□□ 0.33
SMAD4-201ENST00000342988 TRAM1L1Q8N609 369 aa17.11■□□□□ 0.33
SMAD4-201ENST00000342988 MAL2Q969L2 176 aa17.11■□□□□ 0.33
SMAD4-201ENST00000342988 GAD1Q99259 594 aa17.11■□□□□ 0.33
SMAD4-201ENST00000342988 BARD1Q99728 777 aaKnown RBP17.11■□□□□ 0.33
SMAD4-201ENST00000342988 DUSP26Q9BV47 211 aa17.11■□□□□ 0.33
SMAD4-201ENST00000342988 TRAPPC13A5PLN9 417 aa17.11■□□□□ 0.33
SMAD4-201ENST00000342988 BTNL10A8MVZ5 291 aa17.11■□□□□ 0.33
SMAD4-201ENST00000342988 KLF10Q13118 480 aa17.11■□□□□ 0.33
SMAD4-201ENST00000342988 AQP11Q8NBQ7 271 aa17.11■□□□□ 0.33
SMAD4-201ENST00000342988 WRAP53Q9BUR4 548 aaKnown RBP17.11■□□□□ 0.33
SMAD4-201ENST00000342988 ADAM19Q9H013 955 aa17.11■□□□□ 0.33
SMAD4-201ENST00000342988 ADARB2Q9NS39 739 aaKnown RBP17.11■□□□□ 0.33
SMAD4-201ENST00000342988 DGKGP49619 791 aa17.11■□□□□ 0.33
SMAD4-201ENST00000342988 NUDT13Q86X67 352 aa17.11■□□□□ 0.33
SMAD4-201ENST00000342988 CSPG4P5Q96PW8 444 aa17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms