RNA–Protein interactions for RNA: ENST00000340882.2

NECTIN1-202, Transcript of nectin cell adhesion molecule 1, humanhuman

TSL 1 (best) BASIC

Gene NECTIN1, Length 1,059 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN1-202ENST00000340882 KIF5CO60282 957 aa15.25■□□□□ 0.03
NECTIN1-202ENST00000340882 B4GALT2O60909 372 aa15.25■□□□□ 0.03
NECTIN1-202ENST00000340882 RAF1P04049 648 aa15.25■□□□□ 0.03
NECTIN1-202ENST00000340882 FHP07954 510 aa15.25■□□□□ 0.03
NECTIN1-202ENST00000340882 ARNTP27540 789 aa15.25■□□□□ 0.03
NECTIN1-202ENST00000340882 NMBRP28336 390 aa15.25■□□□□ 0.03
NECTIN1-202ENST00000340882 RPS15AP62244 130 aaKnown RBP15.25■□□□□ 0.03
NECTIN1-202ENST00000340882 PPIAP62937 165 aaKnown RBP15.25■□□□□ 0.03
NECTIN1-202ENST00000340882 THEMIS2Q5TEJ8 643 aa15.25■□□□□ 0.03
NECTIN1-202ENST00000340882 B3GNT6Q6ZMB0 384 aa15.25■□□□□ 0.03
NECTIN1-202ENST00000340882 C16orf47Q6ZP98 133 aaPredicted RBP15.25■□□□□ 0.03
NECTIN1-202ENST00000340882 CXXC5Q7LFL8 322 aaKnown RBP15.25■□□□□ 0.03
NECTIN1-202ENST00000340882 WDR53Q7Z5U6 358 aaPredicted RBP15.25■□□□□ 0.03
NECTIN1-202ENST00000340882 LRRC6Q86X45 466 aa15.25■□□□□ 0.03
NECTIN1-202ENST00000340882 NUDT8Q8WV74 236 aa15.25■□□□□ 0.03
NECTIN1-202ENST00000340882 LPGAT1Q92604 370 aa15.25■□□□□ 0.03
NECTIN1-202ENST00000340882 OR1F2PQ96R84 312 aa15.25■□□□□ 0.03
NECTIN1-202ENST00000340882 EBNA1BP2Q99848 306 aaKnown RBP15.25■□□□□ 0.03
NECTIN1-202ENST00000340882 DEFB126Q9BYW3 111 aa15.25■□□□□ 0.03
NECTIN1-202ENST00000340882 ZDHHC11Q9H8X9 412 aa15.25■□□□□ 0.03
NECTIN1-202ENST00000340882 TREX1Q9NSU2 369 aa15.25■□□□□ 0.03
NECTIN1-202ENST00000340882 KCMF1Q9P0J7 381 aa15.25■□□□□ 0.03
NECTIN1-202ENST00000340882 ZNF223Q9UK11 482 aaPredicted RBP15.25■□□□□ 0.03
NECTIN1-202ENST00000340882 KIAA1549Q9HCM3 1950 aa15.25■□□□□ 0.03
NECTIN1-202ENST00000340882 GOLGA8KD6RF30 607 aa15.24■□□□□ 0.03
NECTIN1-202ENST00000340882 GOLGA8TH3BQL2 631 aa15.24■□□□□ 0.03
NECTIN1-202ENST00000340882 FCHO1O14526 889 aa15.24■□□□□ 0.03
NECTIN1-202ENST00000340882 CHST10O43529 356 aa15.24■□□□□ 0.03
NECTIN1-202ENST00000340882 SYF2O95926 243 aaKnown RBP15.24■□□□□ 0.03
NECTIN1-202ENST00000340882 GAS8O95995 478 aa15.24■□□□□ 0.03
NECTIN1-202ENST00000340882 CATP04040 527 aaKnown RBP15.24■□□□□ 0.03
NECTIN1-202ENST00000340882 F7P08709 466 aaPredicted RBP15.24■□□□□ 0.03
NECTIN1-202ENST00000340882 FREM3P0C091 2139 aa15.24■□□□□ 0.03
NECTIN1-202ENST00000340882 MAOAP21397 527 aa15.24■□□□□ 0.03
NECTIN1-202ENST00000340882 IMPA1P29218 277 aa15.24■□□□□ 0.03
NECTIN1-202ENST00000340882 RWDD2BP57060 319 aa15.24■□□□□ 0.03
NECTIN1-202ENST00000340882 HYAL2Q12891 473 aa15.24■□□□□ 0.03
NECTIN1-202ENST00000340882 REXO1L1PQ8IX06 675 aa15.24■□□□□ 0.03
NECTIN1-202ENST00000340882 CAMKVQ8NCB2 501 aa15.24■□□□□ 0.03
NECTIN1-202ENST00000340882 APCDD1LQ8NCL9 501 aa15.24■□□□□ 0.03
NECTIN1-202ENST00000340882 SPATA3Q8NHX4 192 aa15.24■□□□□ 0.03
NECTIN1-202ENST00000340882 PEX13Q92968 403 aa15.24■□□□□ 0.03
NECTIN1-202ENST00000340882 TBC1D20Q96BZ9 403 aa15.24■□□□□ 0.03
NECTIN1-202ENST00000340882 PTCHD1Q96NR3 888 aa15.24■□□□□ 0.03
NECTIN1-202ENST00000340882 SMC6Q96SB8 1091 aa15.24■□□□□ 0.03
NECTIN1-202ENST00000340882 CNPPD1Q9BV87 410 aa15.24■□□□□ 0.03
NECTIN1-202ENST00000340882 FAM114A2Q9NRY5 505 aa15.24■□□□□ 0.03
NECTIN1-202ENST00000340882 CRYL1Q9Y2S2 319 aa15.24■□□□□ 0.03
NECTIN1-202ENST00000340882 STAB1Q9NY15 2570 aa15.24■□□□□ 0.03
NECTIN1-202ENST00000340882 ATRQ13535 2644 aa15.23■□□□□ 0.03
NECTIN1-202ENST00000340882 ERI2A8K979 691 aaKnown RBP15.23■□□□□ 0.03
NECTIN1-202ENST00000340882 G3V3Y1 287 aa15.23■□□□□ 0.03
NECTIN1-202ENST00000340882 PRKNO60260 465 aaPredicted RBP15.23■□□□□ 0.03
NECTIN1-202ENST00000340882 ITGA10O75578 1167 aa15.23■□□□□ 0.03
NECTIN1-202ENST00000340882 CHRM3P20309 590 aa15.23■□□□□ 0.03
NECTIN1-202ENST00000340882 IL10P22301 178 aa15.23■□□□□ 0.03
NECTIN1-202ENST00000340882 PCSK6P29122 969 aa15.23■□□□□ 0.03
NECTIN1-202ENST00000340882 UQCRC1P31930 480 aa15.23■□□□□ 0.03
NECTIN1-202ENST00000340882 HSD17B2P37059 387 aa15.23■□□□□ 0.03
NECTIN1-202ENST00000340882 KLF1Q13351 362 aaPredicted RBP15.23■□□□□ 0.03
NECTIN1-202ENST00000340882 TRIM14Q14142 442 aa15.23■□□□□ 0.03
NECTIN1-202ENST00000340882 ASPGQ86U10 573 aa15.23■□□□□ 0.03
NECTIN1-202ENST00000340882 CIARTQ8N365 385 aaPredicted RBP15.23■□□□□ 0.03
NECTIN1-202ENST00000340882 AFAP1L2Q8N4X5 818 aa15.23■□□□□ 0.03
NECTIN1-202ENST00000340882 TMEM156Q8N614 296 aa15.23■□□□□ 0.03
NECTIN1-202ENST00000340882 RELL2Q8NC24 303 aaPredicted RBP15.23■□□□□ 0.03
NECTIN1-202ENST00000340882 PPHLN1Q8NEY8 458 aaKnown RBP15.23■□□□□ 0.03
NECTIN1-202ENST00000340882 OR2M7Q8NG81 312 aa15.23■□□□□ 0.03
NECTIN1-202ENST00000340882 GIMAP7Q8NHV1 300 aa15.23■□□□□ 0.03
NECTIN1-202ENST00000340882 SLC13A3Q8WWT9 602 aa15.23■□□□□ 0.03
NECTIN1-202ENST00000340882 LIN28AQ9H9Z2 209 aaKnown RBP15.23■□□□□ 0.03
NECTIN1-202ENST00000340882 NECTIN3Q9NQS3 549 aa15.23■□□□□ 0.03
NECTIN1-202ENST00000340882 SLC22A7Q9Y694 548 aa15.23■□□□□ 0.03
NECTIN1-202ENST00000340882 TRBV11-1A0A0K0K1C0 115 aa15.22■□□□□ 0.03
NECTIN1-202ENST00000340882 SYCE3A1L190 88 aa15.22■□□□□ 0.03
NECTIN1-202ENST00000340882 ZNF839A8K0R7 811 aa15.22■□□□□ 0.03
NECTIN1-202ENST00000340882 GOLGA6L19H0YKK7 550 aa15.22■□□□□ 0.03
NECTIN1-202ENST00000340882 GALR3O60755 368 aaPredicted RBP15.22■□□□□ 0.03
NECTIN1-202ENST00000340882 ZNF189O75820 626 aaPredicted RBP15.22■□□□□ 0.03
NECTIN1-202ENST00000340882 CELA3AP09093 270 aa15.22■□□□□ 0.03
NECTIN1-202ENST00000340882 ETS1P14921 441 aa15.22■□□□□ 0.03
NECTIN1-202ENST00000340882 PLGLB1Q02325 96 aa15.22■□□□□ 0.03
NECTIN1-202ENST00000340882 CUL1Q13616 776 aa15.22■□□□□ 0.03
NECTIN1-202ENST00000340882 KEAP1Q14145 624 aa15.22■□□□□ 0.03
NECTIN1-202ENST00000340882 SLC25A35Q3KQZ1 300 aa15.22■□□□□ 0.03
NECTIN1-202ENST00000340882 FLYWCH1Q4VC44 716 aa15.22■□□□□ 0.03
NECTIN1-202ENST00000340882 PCID2Q5JVF3 399 aa15.22■□□□□ 0.03
NECTIN1-202ENST00000340882 CAPN13Q6MZZ7 669 aaPredicted RBP15.22■□□□□ 0.03
NECTIN1-202ENST00000340882 PAOXQ6QHF9 649 aa15.22■□□□□ 0.03
NECTIN1-202ENST00000340882 CES3Q6UWW8 571 aa15.22■□□□□ 0.03
NECTIN1-202ENST00000340882 MPP5Q8N3R9 675 aa15.22■□□□□ 0.03
NECTIN1-202ENST00000340882 PSD4Q8NDX1 1056 aa15.22■□□□□ 0.03
NECTIN1-202ENST00000340882 ZNF740Q8NDX6 193 aa15.22■□□□□ 0.03
NECTIN1-202ENST00000340882 ATG4AQ8WYN0 398 aa15.22■□□□□ 0.03
NECTIN1-202ENST00000340882 TTTY12Q9BZ98 90 aa15.22■□□□□ 0.03
NECTIN1-202ENST00000340882 ATG10Q9H0Y0 220 aa15.22■□□□□ 0.03
NECTIN1-202ENST00000340882 PLEKHF2Q9H8W4 249 aa15.22■□□□□ 0.03
NECTIN1-202ENST00000340882 TRMT1Q9NXH9 659 aaKnown RBP15.22■□□□□ 0.03
NECTIN1-202ENST00000340882 EDARQ9UNE0 448 aa15.22■□□□□ 0.03
NECTIN1-202ENST00000340882 PCDHA13Q9Y5I0 950 aa15.22■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms